gi|00000000|ref|SLYS01000010.1| Pseudomonas sp. JUb52 Ga0304790_110, whole genome shotgun 228434, gc%: 64.76% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 196290..197120 PHAGE_Entero_933W_NC_000924: putative antirepressor protein Ant; EC839_110184; phage(gi9632512) 9.54e-43 PseudomonasspJUb52MHTAPQLFPVPFHGDTVVLVGQDNEAYVAMKPIATNMGLSWQGQHEKLAERFASVIREIVTTGGDGKQYAMTCMPLKKLPAWLYSISPNKVAPELREKIIRYQEECDDALWKYWTQGVAERPGAAATASKQIALSRHRLALLKELHRTRDRALRSAIHEQLAQVSQALGLSVPGLESIGRADPEMPDILKAFWEALAYLEGKGVRFNHAKPGSGKIYLNLPELRKLFREHQIDLRIDQDVIDALKQSTSPRFLKAGLFSSNLNQMKVRGWLFCSND 197743..198831 hypothetical protein; EC839_110185 N/A PseudomonasspJUb52MSHIKTMNPICAFGSDFRESYKADIYKSLTLPQGAILHYRYKFRYVSQEILDNPSLFRGDDAVLFFSHILPRKKPKPFEIPEIERAPDTYKNHSIRWAKIHKIVKTDDTELLHVYFRLGDFCDIELDDNDAAKQPGKIFFGAVKCKEGAENLRKDPRQRLDDENRPGRTTWANRIKELSDYFPKLPFFYIKNIKTKNKIVEFKYDKHTPSCYYPLAQGTDYVIELAVSNIKETDVKIKICEETGELIINHSGDIQTTVQFDDYNIPIFTKPLSTATQSSVLRVNLTKEDKTIPEYETSIDLKLRLSLREPLKFGLFSLLGAGSLLAVAPRTQPFVFNYYLLGASAACFTIAAGFLFYFFNKK complement(198833..199837) PHAGE_Pseudo_phiCTX_NC_003278: portal vertex protein; EC839_110186; phage(gi17313219) 1.39e-175 PseudomonasspJUb52MSDSTALATSAAHAPGVEAFTFGDPAPVLDGREVFDYLECWFNGRYYDPPLSLDGLAKATRASVYLDSGLKFKRNLLARTFIPHPLLSRAAFEQLALDYLWCGNAYLERRQSRLGTPISLQPPLAKYMRRGEEGRFFQVRGWQDEHEFAPGTICHLREADINQEIYGMPEWLAAMQSALLNESATLFRRKYYNNGSHAGFIFYMTDAAQKEEDIDSLRTALRSAKGPGNFRNLFVYAPNGKKDGIQLIPVSEVAAKDEFNSIKSITRDDMLAGLRIPPQLMGIVPQNAGGFGSIKEAAEVYAANELEPLQARLAQVNEWMGEEIVRFCEYSLIS complement(199837..201624) PHAGE_Pseudo_phiCTX_NC_003278: terminase ATPase subunit; EC839_110187; phage(gi17313220) 0.0 PseudomonasspJUb52MKSLPESDPVPIPSTDLLMDVRRRAKYLYWMGWRVTEIAEAIEEKEKTVHSWKSRDEWDRADNVERIGGALEARLVQLILKDAKSGGDFKEIDLLHRQLERQARIQRFQGGGTEAELNPKLDNRNAGPKKKAARNEFSEEQIEALESAFRDQCFGYQLDWYRAGQQRTRAILKSRQIGATFYFAREAFLDALITGRNQIFLSASKNQAHIFKAYIQAFAREVCGVEVTGDPIILANGAELHFLGTNARTAQGYHGNFYFDEFFWTFRFEELNKVASGMAMQKQYRRTYFSTPSSMAHEAYTFWTGERFNKGKPVAQHLKLDVSHDALQQGRLCEDRIWRQIVTILDAEARGCDLFDLEELKLEYSAEAFQNLLMCQFVDDGASIFPLAMLQPCMVDSWVEWAEDYKPFAARPLGDRPVWVGYDPAESGDTAGLVVVAPPAVPGGKFRVLERHQFRGMDFAAQAEAIRQVCQRYWVSYIGIDVTGMGSGVAQLVRQFFPGLTTFSYSPEVKTRLVLKAYDVIKNGRLEFDAGWTDVAQSLMAIRKTTTASGRQFTYTAGRNDTTGHADLAWALFHALHNEPLEGQTGRNTGVMEIY 201779..202624 PHAGE_Pseudo_phiCTX_NC_003278: capsid-scaffolding protein; EC839_110188; phage(gi17313221) 6.82e-107 PseudomonasspJUb52MADPKTPKLRSPFFRVAVEGATSDGRQIERAWIEQAAASYNPKTYGARIWMEHIRSSVADSPFKAYGDVVAVKAEEVEINGQKKLALFAQIEPTADLVAMNKAKQKIYTSIEISPKFADTGAAYLVGLGITDSPASLGTDVLSFAAANPAANPYASRKLHADNLFTVAEETALTFDEAEDKPGLGALLFAKVQELLKGKEAQTQGEFAQFGAAVTAVAEHVREQDERFTRAEAALTELTGKHQQLQTDFAALQVQLSQTQDPNQPKRPPVTGGDGQNLTDC 202653..203669 PHAGE_Pseudo_phiCTX_NC_003278: capsid protein; EC839_110189; phage(gi17313222) 0.0 PseudomonasspJUb52MRNDTRVLFNQYLEQVAKLSGVSSSAATFAVAPTVQQKLETRIQESSDFLSKVNVIPVDELMGEKVGLGVSGTIAGRTDTSGNATRQPREMQALDNRGYECKKTDFDTAITYQLLDTWAKFPDFQSRLRDAIVKRQALDRLMIGFNGTSAAATTNRATNPLLQDVNIGWLQQYRSNAPQRVLKSGKAEGKVVIGTGSDADYNNLDALVFDAVSNLIDPWYRKDPGLVVILGRDLVHDKYFPLVNKEQPASEKLATDVILAQRRMGGLQPVEVPYCPDNGMLITSLQNLSLYYQTGGRRRFVKEAPEKNRIENYESSNDAYVVEDYGFGCLIENIVTGV 203673..204374 PHAGE_Pseudo_phiCTX_NC_003278: terminase endonuclease subunit; EC839_110190; phage(gi17313223) 1.48e-91 PseudomonasspJUb52MASSPAKSHFQAAAAALAAAAAGPADSMAGRTVYEQQLAQLLQDRLRLKQVQSTQAKAELKRQLLGAYADYVSGVLKGGNGAQDEVLVTVMIWRIDAGEFAGALDIAAYVLRHGLLMPDRFERTPGCLIAEEVAEGALAAQKAGQTFDLDILIRTAVLTDEHDMPDEARAKLYLAIGRAELADVDEDRTGRPGQLVSAIEMLRKAIGLHDRCGGKKDLERAERLAKKHAAPGG 204477..204938 PHAGE_Pseudo_phiCTX_NC_003278: predicted capsid completion protein; EC839_110191; phage(gi17313224) 2.87e-59 PseudomonasspJUb52MSGFVAGGTVASGQVVSDPFWPAIELDQVRARLRIDSSVSTEKLKAAVIAAAIGVNRELAGYRFAQSTSGYATLAAVPGLLVDGVSERTHLYLRAIDAATAAEVAERYRSYDSTAKGDKDAEAQTPTIDEYRRDQRWAIRDFLGLARTTVELI 204938..205162 PHAGE_Salmon_SP_004_NC_021774: phage tail protein; EC839_110192; phage(gi526003620) 4.35e-22 PseudomonasspJUb52MATVVRAQQGDTLDRICLRHYGRTQGVTEAALEANPGLAELGPILPIGTPITLPDAPAQASAGIAVQQPVNLWD 205185..205499 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; EC839_110193; phage(gi169257240) 8.43e-18 PseudomonasspJUb52MPDRPDSWAWLAAWLEHNWPALYAGLVAGVIAALRIAYGGGTLRRVLLEAPLCGALALAASHGLSLLGIPASTGPFWGGIIGLLGVEGTRAAAKRFVERKVETQ 205496..206320 PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; EC839_110194; phage(gi17313229) 2.21e-94 PseudomonasspJUb52MNQPKILLIGAHGLAVRDLQKALAAAGFTVDLDGDFDEGTEHAVEAFQRSVGLVADGIAGPKTFAALLGKRDPLHLGYADLELAAKTLAVPVAAVQAVNEVESKGEGFLDNGRVVILFERHVFYQRLVKAHGQAEADRLAALNPNLINPKSGGYAGGAAEWQRLTSARQIDEACALESCSWGLFQVMGYHWQSLGYASVQDFVTRMQTSEAEQLEAFVRFVKAEPALLKALKAGKWADFARGYNGPAYARNLYDVKLERAFARYSTAAPAKDAA 206317..206523 hypothetical protein; EC839_110195 N/A PseudomonasspJUb52MTPVTDVQRLEPQDGEVFILPAGASFEEAERLCEAIQIAKPGVRAVVVIGELEHLDQAAMNRAGWYRQ 206520..206954 PHAGE_Pseudo_phiCTX_NC_003278: predicted lysis; EC839_110196; phage(gi17313230) 1.07e-13 PseudomonasspJUb52MISWKEKALFALALALTIAVLCLTLYAQGLRIDQANQKREAAEDRVTQLTGERDHLADILTEQRAAQARLQTTQTDLRREIDVRKRRIQELEIENADLKAWAGQPLPAAARRLRQRPVITGATAYRDWLSSGNALPAAVDRPAQ 206896..207054 PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; EC839_110197; phage(gi17313231) 1.62e-10 PseudomonasspJUb52MIGCPVVTRCQLPSTAPRNNGELLDDSEALEAAWADCAAQVDMVYDAQQARP 207051..207581 PHAGE_Pseudo_phiCTX_NC_003278: predicted tail completion; EC839_110198; phage(gi17313232) 5.39e-64 PseudomonasspJUb52MNKPESLRAHLLSAVPELRHSPDRLLVFIDKGKLRCTAAASLSWEYGYELQIILTDFAGHPDAVMLPLLAWVRTNQSELLANLDKSAQGIGFEADILDNSKVDLAITLPLTERVVVKRQPDDTYQLNHVPESPYTEYQEPATWQVFVGDELLAEWQSGTAGDALALETPHPGRSRG 207574..208023 PHAGE_Pseudo_phiCTX_NC_003278: predicted tail completion; EC839_110199; phage(gi17313233) 5.90e-48 PseudomonasspJUb52MADLEALETWLSPLLQKLDGRGRAQLARKAAQQLRRSQQQRIRAQVNPDGSPFEARKPRDLRGKKGRIKRRMFERLNMARYLKAKGTPHQAVIGFAGRVSRIARVHQYGLKDRAEREAPEVRYARRELLGLSDQDLQQLRDSLLDGLLD complement(208024..208236) hypothetical protein; EC839_110200 N/A PseudomonasspJUb52MGCLYRPTLGDLEESILGHELMLARFERQLVRVDLDTDAYTDVLRIMEGIQIELENDLARRTELLKRAGW 208292..208933 PHAGE_Pseudo_phiCTX_NC_003278: predicted baseplate; EC839_110201; phage(gi17313235) 2.44e-71 PseudomonasspJUb52MFWVLICSDCRYTTARLHLARAAAILSGMTDIAALSRLIENLIRLGTIAEVDHGSLQDKRPARVRVQSGDLLTGWLPWAALRAGTTRDWDPPTVGEQVLVLSPSGQTAQGIAITGLFSALIPANGDRAGLHRRTYPDGAVVEYDSAAHQLLATLPAGGRVEIVAPGGFKLQGDVDIDGLVTVTRDVVAAGISLVKHPHGGVQVGNAQTGAPSP 208930..209277 PHAGE_Pseudo_phiCTX_NC_003278: baseplate wedge subunit; EC839_110202; phage(gi17313236) 1.40e-28 PseudomonasspJUb52MMSRETGLAVTELEELQQSVGDILTTPIGTRVMRRPYGCDLFSLIDQPFNDATALQAKAVAVIALMRWEPRLNLTRIALTLGDAPGQAFVDLEGYSTVTNAAVSLRAPLVFGGLA 209274..210176 PHAGE_Erwini_ENT90_NC_019932: baseplate assembly protein; EC839_110203; phage(gi431810943) 1.74e-99 PseudomonasspJUb52MIDLSLLPLPDVVESLDFETLLAARKARLVSLYPAAEQANIAARLELESQPLNKLLQENTYRELILRQRINDGAKAVMLAYATGADLENVAAWYGVQRLLVTPADTSVTPAIPAVYETDDRLRYRTQLALEGFTTAGPRNAYRYHALSASAKVKDVAILRPIQGTVRVVVLSTEGDGTPSAALLATVTAALNDEDVRPLCDTVEVVAAEILPYQVAATLVFYNGPDMAVVQTAALAKAKAYVAERHAMGQDVSRSGLFAALHQSGVQNVILNSPATDLEVAQHQAAYCTGITLTQGGTDE 210169..210735 PROPHAGE_Salmon_Ty2: putative phage tail protein; EC839_110204; phage(gi29143753) 3.38e-28 PseudomonasspJUb52MSSVLLPPNSLPLERAITASGAGLDALPVPIRDLWNPWKCPAAVLPWLAWAVSVDDWDVNWGEDAKRQIIADSVTVHRHKGTRGAVRRALTNLLGSEAFTLIEGATGGLYDANRTYNGDRFYGHDEHWAKYSVYVTQPISVAQAARIRQTLADVAPARCELIALNFTAALNDHSGTFRYDGTFTYGVA 210735..213212 PHAGE_Sinorh_phiN3_NC_028945: putative tail fiber protein; EC839_110205; phage(gi971758993) 1.44e-39 PseudomonasspJUb52MTNLTEKEQWEDGVYQIEKTDPVVGGPDGLSNRQGQQLANRTKYLKGLVDGLLSGARNAAVAVKLATARAVKLTGDATATGTFDGSADLSLTVTLADTGVAAGTYGGVTLDKKGRATAAAIFLPVANGGTGNGSGQAPSATKLATARTINGVLFDGTANITITDDSKAPLNSPVLTGDPRAPTPSAGDNDTSIATTAFVQAAIAALVNGSPEALNQLNELAAALGNNPNYATDMATALGLKANSESPNLTGTPKAPTAGIATNTTQIATTAFVQAVMAAYGLAGAAPVQNNAINLNDAPVGGMIRCEDVVTAGAALNWPVTGAADAARVAFEVFTHGLPGSAARLTQVATEVFGASGGRGRTFVRVRHDATWYAWREFAFADQLANVARTGKFSDLQDQTDHVLKGTTTGNGWKLVTLQNLEAAGNLSLEYRNSAGITTLCYQGVNDGNGGWRPRWFFTPSGSATADRRAYFGGLNDQDQMEYVVKTRIRPGSSWITDPSGASLCVQSDAGDGTGGLSVMSYAPTVAMLDRTGGAKSSRWKTDGNNLFLEWDNGDNGATWNPSLLSVTPGGEVRSLSSNCYRIVSGNYGTFWRNDGNYLWLMITASGDPYGGYNSLRPLSVKLDTGKVVVGNGIEMPTKARGDSTNDGASTAFVQDATGTRTAEVVFFPSSSAPAGFLKANGAAVSRSTYAALFAVIGTNFGAGDGSSTFNLPDLRGEFLRAWDDGRGVDGCRVLNSSQASQNLNHTHSATAANAGAHQHTMSFKQDRAPEGSGNAVYGDEAYYSGEASQGTSTAGDHTHTITVSFSGGTESRPRNIALLACIKY 213224..213931 PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; EC839_110206; phage(gi428782810) 1.75e-29 PseudomonasspJUb52MTVTDSENLLVSLDLPAQTTALPWWQDRLVPQVATFDPVSGELLGKTSADPSPLEPDVWLIPAHSTLDNPPEPSTGMVLVRRDEAWIEVEDHRGATVYHTGTGEPRQWALLGPLPSDYTLVAPLSEFDTWQDDHWQLDEAAQLAAAKALATRKRALLLQYASNQVDALQDAVDLEIATEAETKALKSWKTYRVLLNRVDTIGAVPAEGDWPTSPDPAATTGYLSAQGYQEPTPAA 214044..215210 PHAGE_Pseudo_phiCTX_NC_003278: major tail sheath protein; EC839_110207; phage(gi17313241) 0.0 PseudomonasspJUb52MADYHHGVRVLEINQGTRSISTVSTAVIGMVCTGSDADADAFPLNTPVLLTNVQGAVGKAGTKGTLAESLQAIADQSKPVTVVVRVPDGANAAELQSNIIGGVANGRYTGMKALLAAKAQLGITPRILGVPGLDTQAVTTAMVAIAKQLRGFVYASCNGCATKEEAVAYRNQFGARELMLHWPDFLAWSTVQNATVTANATARALGLRAQLDQSTGWHKTLSNVAVDGVTGISKDVFWDLQNTATDSDYLNGNEVTTLINHDGYRFWGSRTTSEDPLFAFENYTRTAQVLADTMAEAHFWANDRPMHPSLVRDIVEGINAKFRELTRQGYLLGGECWYDADANEKETLKAGKLFLDYDYTPVPPLEDLTLRQRITDRFLVDFASRVNA 215265..215780 PHAGE_Pseudo_phiCTX_NC_003278: major tail tube protein; EC839_110208; phage(gi17313242) 4.86e-99 PseudomonasspJUb52MAMPRKLKNMMLFNDGHSYLGVAKSCTLPPLGRKMEAFRGAGMNGPVKADLGFSDDGIQLEWTLGGLDLTALKQFGAVGAAAVPLRFTGTYQQDDTGEDTAVEIVVRGRHETIEMGEATPGEDTEHKITTTCSYYKLIVAGETVIEIDLLNFVEIVGGEDRLAKQRAALGI 215843..216148 PHAGE_Burkho_ST79_NC_021343: phage tail protein E; EC839_110209; phage(gi509141648) 6.62e-30 PseudomonasspJUb52MSDTTQDNVVVLDQPITRGETTIAQITLRKPNAGELRGVSLAELLQLDVAAIMRVTPRISIPSLTESEVRSMDPADLVDVGGKIAGFLLKKSVRAELSPSA 216157..216276 PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; EC839_110210; phage(gi17313244) 3.74e-13 PseudomonasspJUb52MADLAITFHWQPAQLDQLGLAELMDWRERARKRVSPDGQ 216266..219271 PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; EC839_110211; phage(gi17313245) 8.33e-79 PseudomonasspJUb52MANDLQIRVLLSALDKVTAPLKRIAGGGNATARALKAARDRVKELNQQQQDISAYQRQREAVRQSAEALAKGQEKLRGYRQDLKAMDAPSAAFQKRFANVAAEVDRLHAKHAAQRTELQRLLPIMRAGGVDTRDLGGAQARLQAQLTSANAAIDTQRGKLERLNRTQEKLASARGKLKRGQELAGNAAMAGASSAATGAAIGGPVLGMIKAFAPAEDAATQLRASLMLSDGTAPKEFKEISDLATRLGDRLPGTTAEFQEMMTMLVRQGMSAKTILGGMGEAAAYLGVQLKMPVTEAAKFAAKMQDATRTSEKDLMGLMDTIQRGFYLGVDSNNMLEGFSKISPALDIIKKEGLEAANALAPLLIQLDQTGMEGGAAGNALRKIFQMGMDTDKVGKANKGLKDKGIKLDFTDGKGEFGGMEKLYAQLDKLKVLNTETRLGVLKQVFGDDSETLTALNTMMSKGLVGYQEVQGKMKAQADLQMRVNEQLGTLSNTWEAATGAFTNAQSEFGAAIAPQLKEIITWLGDLAGKTGAWARENPVLAGNLVKVAAVLSGVSIAFGTVALGVAGVLGPFLALRFMLAQVGIRLPSVLGLLFKLGKGTFPLVAAGLRLIGAAAIANPIGAVLFGLVAAGALIYANWKTIGPWFAGVWAEMKARATGGIASIAGLILDFSPIGLFYRAFAAVLNYFGLELPPRLTEVGAVLLNGLTAGVSGGIGAIARKILDFSPVGLFYQAFAAVLNYFGFDLPAKFTELGGMIMDGLVRGITGRLGAVKDAVMGAGQSAINFFKEKLDIHSPSRVFAALGEYTMQGLAVGMGKGEGSPLGQIADTAKRIAATATAALALGGAPQMSAAQPLPSAQQQQMEAVRQVTQQPAILALAQPAGDTTLLQRQIESVRQAIMQPAAAVVPAIVKDASPQSRQIEAVRQTTLQQPAREPIAFDSRPALPPAPLPAPATGDHYEIHIHAAPAQDPQAIARQVRAELARLQAEKAARSRSSLRDRT 219276..219719 PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; EC839_110212; phage(gi17313246) 1.73e-69 PseudomonasspJUb52MMMALGNFIFSLYTLAYQELQRQTDYRHATSSRVGAAPARQFLGKGDDSITLPGWLAPELAGTPSSLDVLRYMAGTGGAWPLIEGSGRIYGLWVIESITETKTLFFQDGTPRRIEFSIALKRVDDDTGRELLGAGMAGMGTVLRKLL 219716..220984 PHAGE_Pseudo_phiCTX_NC_003278: tail protein; EC839_110213; phage(gi17313247) 0.0 PseudomonasspJUb52MIQELLDTATGQLRTLGRDLVQGATYAQARYQILVDGKDISALIAPRLISLDLTDNRGLEADQLSLVLSDHDGLLAIPPRGAKIRLWLGWSTTGLIDKGSYVVDETEHSGAPDVLSIRARSADLRKGLKTKRDQSYSATTLGAVLRVLAARQGLTPLIAPALEAQQVLQLDQTGESDANLLTRLGEDYDAVATVKAGRLLFLPAGGGKAVSGADLGHVTLTRKDGDQHSYLQADRESYDAVRAFYYDVNSAKKKEAIAGGGENVKDLRHIYADQLSALRAARAEWNRLQRGTAALTYQLALGRPELMPELTYTLQGVKAEIDSIIWYGGNVQHSLTADGGYITRLELEAKLPEDLVADLVDEIQGDYTGIIAYYRDPKTGKEHTLTEGDQSKPRRLRYLYATKATAKRAVEREWRKLRDVQT 221227..222765 PHAGE_Bacill_G_NC_023719: gp350; EC839_110214; phage(gi593777806) 4.73e-14 PseudomonasspJUb52MPIDVAKPIEPFDSSAGRLKLIAAIFIIAVLLLLAGLIAWQSIRDYRMQIKDAEEYTSNLVLSAAQHAEDAIKEIEAFSSGMVERAEWYGLDNIDAERLRKVFLGQASIMHQIHGIFIYDSEGRWLVTDKTTIPPNANNSDREYFIYHKTHKDRSMHIGQVIKSRSTGELVIPISRRIDRPDGSFAGVFLTTLHVKYFNDFYSNFKLNGSDIFAVALRDGTVLTRRPFDEKTVGTNISKGDIFSKYLPLSPIGTARIISIVDGVERINSYRQLSRYPLVVQAGLSMDGILAQWRHSLVRLIFLTTAIAIVLIIFSTVLFYQIKITSKTEDKLKTALRALETLASEDALTGLKNRRSLDQTLPIEISRAQRSNSPLGLIMLDIDHFKKYNDHYGHIAGDVCIKAVSECIKNSVRRPSDFASRFGGEEMVILLPSTDEFGTYEVAKKISETLKSLNIPHEKSPKGRVTVSIGIYCSHPNSTINSPAELLNLCDERLYQAKIKGATLSSLQLGNR