gi|00000000|ref|UCVZ01000005.1| Escherichia coli strain VREC0442 genome assembly, contig: 257937, gc%: 50.60% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 35..1039 PHAGE_Entero_lambda_NC_001416: hypothetical protein; SAMEA3472111_01262; phage(gi9626267) 1.57e-18 EscherichiacoliMYFPLARSYAALTAFGVAASDSEVLLVALLSCTIPFFVVLASSSATADAISSARFAAVSARVAADSAVLLLCAAAAALPAASVAFVDAVVALPLAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSVASPAFVVAVEADDAALSADFPAAVALTAASSALMDASRADDAAVVSESAAAEALCSAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALDDAFVSDDFAASFEAAASRAEVAASDAFVVAVDAEVAADFCDAAAFVSDVFAAPALVAAALFEDSAAAALFDASVAFVDAVPALEDAS complement(1601..2200) PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; SAMEA3472111_01263; phage(gi148609401) 4.10e-143 EscherichiacoliMRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNVPGSDDLNGINVKYRYEFTDTLGLVTSFSYAGDKNRQLTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF complement(2271..3212) PHAGE_Entero_DE3_NC_042057: DNA polymerase; SAMEA3472111_01264; phage(gi100036) 3.88e-67 EscherichiacoliMNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIWFLKRLTAPTITSGGSPPVFSLTSDGKLTAKNADISGSVNANSGTLNNVTINQNCTIKGMLEATQVRGDFVKAVSKSFPKQAGTWGNTETPNGTVTVTISDDHNFDRQIIIPPIIFNGIAYSDPGSGNNPGGTRYTGYGFEVRKNGVLIASRETKGAIPGSYSAVIDMPSGRGSVTLEFKVFHKGNQRAGNITDCTVIVTKKAASGISIR complement(3187..3732) PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; SAMEA3472111_01265; phage(gi100035) 4.64e-128 EscherichiacoliMEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 4382..4394 attL N/A GTAATTGAGTTGC complement(4480..4686) PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; SAMEA3472111_01266(gi100034) 6.10e-43 EscherichiacoliMNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD 4972..5382 PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; SAMEA3472111_01267; phage(gi100033) 9.72e-96 EscherichiacoliMAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR 5673..5966 PHAGE_Escher_PA28_NC_041935: endonuclease II; SAMEA3472111_01268; phage(gi100065) 6.91e-64 EscherichiacoliMKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK complement(5998..6459) PHAGE_Entero_DE3_NC_042057: hypothetical protein; SAMEA3472111_01269; phage(gi100031) 5.49e-105 EscherichiacoliMSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR complement(6456..6953) PHAGE_Entero_SfI_NC_027339: lysozyme; SAMEA3472111_01270; phage(gi849250312) 1.10e-117 EscherichiacoliMPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ complement(6953..7168) PHAGE_Entero_VT2phi_272_NC_028656: holin; SAMEA3472111_01271; phage(gi966197762) 5.28e-37 EscherichiacoliMKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE 7741..8838 outer membrane porin; DLP12 prophage; SAMEA3472111_01272 N/A EscherichiacoliMKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF complement(9028..9411) PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; SAMEA3472111_01273; phage(gi985761278) 3.75e-71 EscherichiacoliMRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN complement(9497..9634) PHAGE_Entero_mEp237_NC_019704: hypothetical protein; small; phage protein; SAMEA3472111_01274(gi435439319) 1.49e-13 EscherichiacoliMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV complement(9634..9996) PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; SAMEA3472111_01275; phage(gi100034) 5.08e-38 EscherichiacoliMNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE complement(9993..10283) PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; SAMEA3472111_01276; phage(gi100033) 2.58e-42 EscherichiacoliMADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA complement(10276..10446) PHAGE_Escher_HK639_NC_016158: NinE; SAMEA3472111_01277; phage(gi356870663) 4.54e-20 EscherichiacoliMATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG complement(10446..10901) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; DNA; phage base-flipping protein; SAMEA3472111_01278(gi401817579) 2.41e-79 EscherichiacoliMNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA complement(11116..11913) DNA-binding transcriptional regulator; DLP12 prophage; SAMEA3472111_01279 N/A EscherichiacoliMLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE complement(11923..12474) kinase inhibitor; SAMEA3472111_01280 N/A EscherichiacoliMKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK complement(12939..14465) PHAGE_Burkho_Bcep176_NC_007497: gp53; DLP12; phage prophage; SAMEA3472111_01281(gi77864678) 1.26e-35 EscherichiacoliMKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEKSEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPVRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRVSVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF complement(14720..15052) PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; SAMEA3472111_01282; phage(gi311992758) 4.38e-10 EscherichiacoliMNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH complement(15120..15422) PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; SAMEA3472111_01283; phage(gi100033) 8.86e-59 EscherichiacoliMTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ complement(15419..16120) PHAGE_Entero_DE3_NC_042057: DNA primase subunit; SAMEA3472111_01284; phage(gi100025) 4.51e-168 EscherichiacoliMKNIAAQMVNFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQNELNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVNAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV complement(16117..17121) PHAGE_Escher_PA28_NC_041935: hypothetical protein; SAMEA3472111_01285; phage(gi100031) 1.89e-142 EscherichiacoliMAKVGLREQNRLSGANRNTLIAGGIMANTAEIFNFPVPDAAQKEPRVADLDDGYTRIANELLEAVMLAGLTQHQLLVFLAVMRKTYGFNKRLDWVSNEQLSELTGILPHKCSAAKSVLVKRGILIQSGRNIGINNVVSEWSTLPESGKKNKVYLKEVNLPESGKKSLPKSGKGVYPNQVNTKDKLTKDNIKPFSSENSGESSDQPENDLPVVKPDAAIQSGSKWGTAEDLTAAEWMFDMVKTIAPSARKPNFAGWANDIRLMRERDGRNHRDMCVLFRWACQDNFWSGNVLSPAKLRDKWTQLEINRNKQQAGVTAGKPKLDLTNTDWIYGVDL complement(17133..17672) PHAGE_Entero_phi80_NC_021190: CII decision making protein; SAMEA3472111_01286; phage(gi824479625) 1.99e-84 EscherichiacoliMQPLTYQQTSGFIPTAVINRSQIKQAPGHEKIRDAVRAWSAVDNQDVVAALIVNEYREQGDGTIDFPDDVSRARQKLFRFLDNKFDSEKYRNNVRELTPAILAVLPLEYRGYLVEQDSFMTRLAEMEKELSEAKQAVILNAPRHQKLKEMSEGIVSMFRVDPDLAGPLMAMVTTMLGAI complement(17742..17972) PHAGE_Escher_PA28_NC_041935: hypothetical protein; SAMEA3472111_01287; phage(gi100029) 8.50e-24 EscherichiacoliMNPAIKTAINIVGSQKKLGDACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQIRPDLPKLFPHTEKNAA 18077..18766 PHAGE_Salmon_BTP1_NC_042346: RegA; SAMEA3472111_01288; phage(gi100039) 3.51e-123 EscherichiacoliMKTTLSERLKEARLARGLTQKALGDLVGVSQAAIQKIETGKANQTTKIVEIANALGVRAEWLSSGVGNMSDSTVQPIQSTVSHSKYFKIDVLDIEVSAGPGVINREFVEVLRSVEYSFDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDITVKSFDGDGIYAFLYDDTAHVKRLQMMKDKLLVISDNKSYSPWDPIEKDEMNRVFIFGKVIGSMPQTYRKHG 18996..19376 PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: recombination endonuclease subunit; SAMEA3472111_01289; phage(gi100052) 2.16e-08 EscherichiacoliMRKILIAAMMASVLAGCASSGNQQLKNETEISVQSKLQEGKTTKNEVKSYFGSPDAVSYTDSGKEIWKYAFAKVKVNGTTFIPFYGLFHNGTNGTKKELTILFNDDTIKKYTMSETQINSKSGWAD 19857..20063 PHAGE_Entero_HK225_NC_019717: Kil protein; SAMEA3472111_01290; phage(gi428782413) 7.61e-36 EscherichiacoliMVHQHYGTQTVNRGAVMPGMLVKHKDGTWTASANLRGRLYLHRGIERTYTRDLLVEVFLDGRGNGLNR 20139..20435 PHAGE_Escher_PA28_NC_041935: DNA helicase; SAMEA3472111_01291; phage(gi100021) 2.65e-66 EscherichiacoliMNAYYIQDRLEAQSWARYYQQIAREEKEAELADDMEKGLPQHLFESLCIDHLQRHGASKKAITRAFDDDVEFQERMAEHIRYMVETIAHHQVDIDSEV 20441..21226 PHAGE_Entero_933W_NC_000924: Bet protein; SAMEA3472111_01292; phage(gi9632480) 0.0 EscherichiacoliMSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKATEQKVAA 21223..21903 PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; SAMEA3472111_01293; phage(gi209427739) 1.60e-169 EscherichiacoliMIPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNITESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR 21900..22082 PHAGE_Entero_DE3_NC_042057: hypothetical protein; SAMEA3472111_01294; phage(gi100011) 4.01e-37 EscherichiacoliMTHPHDNIRVGAITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEKINNKREAVCTKHLLLS 22055..22246 PHAGE_Escher_PA28_NC_041935: exonuclease A; SAMEA3472111_01295; phage(gi100018) 2.77e-38 EscherichiacoliMHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLATSLSQKLEMMVAKAEADERDQV 22323..22538 PHAGE_Escher_PA28_NC_041935: hypothetical protein; SAMEA3472111_01296; phage(gi100017) 1.10e-46 EscherichiacoliMTPQQENALRSIARQANSEIKKARQHFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER 22637..22855 PHAGE_Entero_SfI_NC_027339: hypothetical protein; SAMEA3472111_01297; phage(gi849250254) 3.75e-47 EscherichiacoliMADIIDSASEIEELQRNTAIKMRRLNYQTVSATHCCECGDPIDERRRLAVQGCRTCASCQEEIELKNKQWGL 22903..23181 PHAGE_Entero_SfI_NC_027339: hypothetical protein; SAMEA3472111_01298; phage(gi849250253) 1.41e-62 EscherichiacoliMFRIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFRFNHDFEPVNKADADRIAEEIETAEHIKKLRDMRSKSRGNHGIIQPHTR 23380..24543 PHAGE_Shigel_Stx_NC_029120: integrase; SAMEA3472111_01299; phage(gi985761248) 0.0 EscherichiacoliMSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA 34774..34786 attR N/A GTAATTGAGTTGC