Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1043724674 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1043724674.PHASTER.zip
gi|00000000|ref|KX236178.1| Klebsiella pneumoniae plasmid pHS091147, complete sequence. 121348, gc%: 52.81%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 12.2Kb | incomplete | 30 | 11 | 10-12280 info_outline | PHAGE_Entero_P1_NC_005856(2) | 53.42% | Show info_outline |
2 | 12.9Kb | incomplete | 40 | 7 | 94539-107499 info_outline | PHAGE_Staphy_SPbeta_like_NC_029119(2) | 59.22% | Show info_outline |
>1 10-12280 ATGAATAACCTGGTTCCAGTTGGATCTCCGGCATCTCCCGGAACATTGCTCCCGGTGGCCATCGATTACC CTGCCGCCCTCGCCCTGCGCCAGATGGCGCTCGTGCAGGATGAACTGCCGAAATACCTGCTGGCGCCGGA AGTCAGCGCCCTGCTCCATTACGTGCCGGATCTTCACCGCAAGATGCTGCTGGCGACGCTGTGGAACACC GGCGCGCGCATTAATGAAGCGCTCGCGCTGACCCGGGGGGATTTTTCGCTGGTGCCGCCGTATCCGTTCG TGCAGCTGGCCACGCTCAAGCAGCGCACCGAGAAAGCGGCCAGGACGGCAGGTCGTGCCCCCGCAGGCAG TCAGGTCCATCGTCTGGTTCCCCTTTCCGATCACCACTATGTCAGCCAGCTGCAGATGATGGTGGCCACC CTGAAAATTCCGCTGGAAAGACGAAACAAGCGCACCGGCAGAATGGAGAAGGCACGTATCTGGGAGATCA CAGACCGTACCGTGCGCACCTGGCTTAGCGAAGCGGTGGAGGCCGCAGCGGCCGACGGGGTGACGTTCTC AGTACCGGTTACCCCCCATACGTTCCGTCACTCCTACGCGATGCATATGCTGTACGCCGGCATACCTCTG AAGGTTTTGCAGAGCCTGATGGGCCACAAATCGATCAGTTCCACGGAGGTCTATACGAAGGTGTTTGCGC TCGATGTCGCGGCACGGCACCGGGTGCAGTTTGCTATGCCGGAAGCTGAAGCTGTTGCGTTGATAAAAAA GTTAACCCCAAACCAATCTACATAGGTCAACTATGGGTAATACCCCAGGTTTCGACCTAAAGTAGTTCTT GTGTGGGAAACAGTCCAAGCTTAATGGGGGCTTATCCAGCCTCACTTTTTACAGCTTTCAATCACATTAA TTATGTTCAGAAAGGCCCTCATTGCCCTAAAGAAAAAAAATGCAGCCATGAAAATAAGGAATAATTGAGA TACAACTCCTGCTAAATCATGGTTGCTACCAGCCACTGATAGCAACGTAAATAGTAATGCAAGCGAAAAA TGTAAGGCGATTGTAGTATTTGAATTCATGTATATCCCCTTATGTATAGGACTGAGGCCATCCGCAAATT TTCACTATCGCGAAGTTGTTGCCTCGATATAAAAGGTGTTACCACCCTGAACAAGATAACAAGATAACAA GATAACAAGATAACAAGATAACAAGATAACAAGATAACAAGATAACAAGATAACAAGATAACAAGATAAC AAGATAACAAGATAACAAGATATTATCGTTGTTTCGCTTCTGCGATTAATCTGGATATCTCTGTTTTTGA TAAACTTTTTAGTGCCTCTACCGCTGCCCTGACTACGTCAGAACGATTCACTCTGCTTTTACCTGAAATC ATTTCACCCGTTATAAGATCATCAATGTCTTTTAAGTTTTCTTCAAAAAAGGAAATGCTCACTGGTTTTG CTTTACTTACAGCCAATGGTCTCTCTGAAGTCACTTTGGTATTATCAATACCAGCAGTACCACCGTTAAT AAACGCTGCCTCATCACGAGATGGAGTATTTGCTCTATTTCTCACAGAATAACCTCTTTAACTAACGATT CGATTTCTTGTTGTGCTTTGTCATTTTGCGTTTCAAATATTGTCATTGATTCTGCCCAGGCATCTCGATG CGCTTTTCGATCACAAACTCGGGAGTTAGCCAGACGCATTTCAGGATAATCCTTGAGTACGTCAGCTGCC TGATTTGCTTCATTGACAAACATGTTCGTGGGCGTCATGTTTAAAACGAGATATCCCCGGACGTCCTCAT TAAAATCTTTTGCTGCTGTAAAAACAGAGCATGTATGAGGCACTACATCCAGGTCCATCTGAGAAGGCCG CAACGGAGAAATGAATACGTCAGCGGCCATCAACCCACTACGCATTTCTGCACTGTCGCGGCCAGCACAG TCTGCGATGACAAAGTCATAAGATTTCTCGTGTTCCTTTAGCATGGCTTTGATGTTGCCTGTTGCGCCAG TAACCGGAATATGGGGAAGATCTTCAGGACGATTGTTGTACCAGGTCAATACAGATTTCTGGTCATCTGC GTCGACAATGATCACTCTATTGCCCAGTGACATCAGATACGCAGCTATAGATACCGCCAGTGTACTTTTA CCAACCCCACCCTTTTGACTACCCAATACTATTATCATCATAGCCTCATATTAAGTTGTTAAGTTAACAA CTTAATATTGCCAAACAGGCGACAATATTGCAATTTCTTTATTAAGTTAATATCTTGTTAAGTTGTTAAC TGTGTGATTTATAACTGAATTGTTTTTGTATCTTAACAAATTAGTAAGATGTTAGGATAACAAGATAACA ATATAACAAGATAGCAAGATAGCAAGATAGCAAGATAGCAAGATAACAAGATAACAAGATAACAAGATGG CAAAGTGGTGCCTTTATCCGAAATCCCCATAGAACCACATAATGCGGCTTTCAACTCCAGGCTACCTTTA GGGAGGGTAGTATCAACCAGTTATGACCGCGTGAAGCAAAAAGTGGGGCGTAGTGGGAAGCCTTTGAATC TTCGGTGTGTCGAAGTGGGGAGTCGGTGAGACAAATTTGGTAAAAGGTGGTGAGAAGCGGATAGCTTCTC ACTTCTATCCAAAAAGTGTGTTGAGTGGCAGGTGCGTAGTATATACAGATAGACACACATTTACAGGTTC TCATCCGCTACAACACACTATAGACGTTTAGGCGAGCCTCCCCTACACACACCTATCAGATGTAGAAGAG ACTTCGATCAACACACCTATTCCGATGCATCGGTTGGAACCACCTATACAGCGTTCCTGGATTCGGATTT GCTGAGCGACGGTGGATCAGAATGAAAGTCTCTTTACCTTTTTTGGTGATGCTGTGGTCAAGGTACCCAA TATCCTGCAACTGCTTGAGGGCCAGTTTAATGATACGGTTCTGTTCCTTTACCGGAGAGAGCAATGAGAG CCTGTCTCGTATTCGTTTGAAAGATATGGGGACTGGGTTCGTAGGCAGGCTTTCGATGAAAGTATACAGG GCCTGAGCTGCTTCCTTTCGGGTTAAAGCGTTTATCGGTTTATGTCGTAGCAGAACAGTGTAATCAGTTT GGTAGAGTTCCCATAGTCGCTGATCAGCTTCAAGTTCCACCTGGTCGTTTGCAAAATCCAGTTCACCTGT CTTAAGCAAACCTGTTACGGAAACTTTTTGAAGGCCCTCTGAGTCGCTACGGGTAAAGGTAATGGTCTTG CCACGTATCCTGGTCAAAGCTTCTGAAATACTTTTTCTAAGACGGGAATCGAATCTCTTAGACTCAAAGC GGCACATTCCAGCAAACTCATGAAAAGTAAGCTTAATGCTGTTGGTTTTTAAACCGTACTTACTGAAAGC TTCTATGATACCGACCCATACCTTGAAGTCGATGGCCATACTCAACCGTTCACCGGTTATACGAATATCG TCGTACCCCTCCCGCCTTGAGAATTCCAGATCCTTGAGAACAGAGGTCGCATCGATTGATGTTCTGGTGC CCTTTGCAGGCCTGCTTGAAGGAACAAAAACATTTAATCTCATCAGGGCTACAGGCTGAACTGTGGCCTT ACTTGTGACGGTGAGTTTATTGTTAACACTTTCACAATCTGGACCTATAACCTCGCCGATATAAACATTC TCATTCATATAGTTATATCCATTCATAGCATATGATCGATATGTGCCTAAATATTAACTATTTCCCGTTT CGACACACCTTTCTTCCCGATTCTACCCACCCTTACCCCGTTTTGACACACCTTTTTCCCGCTTCAGAAC ACCTTTTTCCCACTACGACACACCTGAAATCGCTACGAAGCCCGTAAACAAAGGTTTTGCCGCTAAAGGG ATCAGTTTGGATCTATTTGGATAACTAAGGGTAAGTTATTGGATCTACTCAAAGGATATGTGGATAACTC ATTATGGAATCTATAGAACTTAAGTGCGTAAGGTGCTTTAAAAGGCTTCAGCTCCCCTGGTGCTTCCTCG CTCACTCGCGGGCTTCGCCCTGTCGTTCGGCTGCGGCGAGCACTGCTGGCTCTCTCTGAAAGGCAAAATT TAACCGATCCTCGCAACGGGGATATCTCTCCAGCGAGTGGTGTACGCAGGGGAGAGCATATCGCGTTTCA TTTGCCAGGATGGCGCAATTCCTCTACCGGCAAACCATACTTTACCCAGCCCTGAGTTGTTGATCCCGTC CAGAACCCTCATCAGCTCAGCACTGTGAGGGCGTGGCGGGCGTTCGTCAAACAGCTGCAGCTGCGAAACG CCGGAGCCGGTGAAGTCATTCAGCATAACTCCGGCTTTGGCATACCGGTGCCCATCCCTCCAGATACGCT CCAGAGCCATTGTGGCGGCTGCAATGATGTCCCTGGTGTCCTGAGTGGGCGTAAGCAGTTTTTCCGTAGC CACGTTGCCGTAGTAAGGCTCTTTAATGGCGAACGGAGACGTTTTGATGAAAACGGAAATATGCCGGCAA TACTGGTGCTCTTTACGCAGTTTTTCAGAGGCCCGCTCTGCGTGCTGACAGATAGCCTGACGGAGTGACT CGTACTCCGTGATCTTCACGCCAAAACTGCGGCTGCAGACAATTTGCTGTTTCGTCGGAGGGGCTTCCTC AAGCGAAAGGCAGCTTTCCCCGTTCAGTTCCCGTACCGTTCGCTCAAGGACCACAGAAAAATTTTTGCGG ATGAAGGCCGGGTTCGTCAGAGCCAGATCGAGCGCGGTTTTTATGCCCAGCACATTTAGCTTGCGTGCAA TACGGTTACCCACCCCCCAGATTTCTTCAACCGGCTGCAGTGAAAGCAGTTTCCGCGTCCTTTGCGGATT TCCCCTGGTCAGCGCGAGTACGCCACGAAACTGTTTCCACTCTTTTGAGGCCCACTGGGCTGATTTTGCG AGGGTTTTCGTTGGTCCGGCGCCCACGCCAATGGTCAGGCGGGTACAGTCATACACGTGCTGACGCAGCT GCCGGCCGAAGTCCTCAAGCCCCATACAGTGCTCCACGCCGGTCAGGTCGAGGAACATCTCATCAATGGA ATACTGTTCCACCCTGGGGGCCAGTTCCTCCAGGCAGTTCATCACGCGCGCCGACATCGAGGCGTAAAGT TCATAATTACTTGAAAACGCATATATTTTTTCCGGGTACCTTTCGTTTTTTATCTGAAACCACGGAGTTC CCATTTTGATCCAGGGCTTCGCCTCGGCACTGCGAGCGATTACGTTCCCGTCGTTGTTGCTCAGGACGAC TATCGGCTTTCCTTTCAAATCCGGGCGGAAAACACGTTCACAGCTGGCATAGAAGCTGTTCACATCGGCC AGGGCAAACATCAGTACATCTCCCTCGGGCGGTGGATGATATGCGTGACAACGCCAAAGATATCCAGCTC GTCGGGATCAGGATAAATCGGCGACCAGGAGGCATTCATGGGCTGCAGCGTCAGTCGCGGCGTCAGCAGA AGCCGTTTCACCGTAAACTCCCCCTGTACGCTGGCGACAACGATATCGCCGTGCCGCGGCTTTTCAGCAC TGTCCACAACCAGCAGATCGCCATTGTACAGACTGCCGTCGGCCATGCTGTCTCCGCTGGCACGCAGGTA GTACGTCGCGCTCGGATGCCGTATGCAGTAATCATGGAGATCCAGATCGGACTCGACATAGTCAGCAGCA GGGCTGGGAAAACCGCAGCTGGCCAGATCGGCAAACAATGGATGGGCCTGTGGCGGGAGTTCTTTCCCGG TGCTGAAAAGCTGTAGTTTCATCTTTCCTCCTGACACTCTAATTTTTACTGGTTATGCATACAGTATATT TAACAGCGTGACGATAATCCAGATCGCATGCCTTAAGAACATTTTGAGTAAATAAAGGTGTTCAAAATGC TTATATTAATCATTTTGATATTTTTATATTGCTCATATTGAGAAATGTTACTTTGTTTTTTTCATTTTGC TCTTATAATTGGTATCAAATTGAGTTTAACTAACGGAGCATATTGATGAATATTTACTGCGATGATGGTT CAACTAATGTTAAGCTGGCATGGTTTGAAGGCGATGAGCTTCAGACCCGGGTTTCTGCGAACTCCTTCCG GCATGGCTGGAAAGTGGCGGAATTCAGTGCGGCAACGTTCAACTATCAGGTGGGGACGCTGAAATACACC TGGGACAGCGTCAGTCGGGATGCCATCCCGACAACAAACGTGGAATATCAGTACGGTGATCTCAACCTGC TGGCCGTGCATCATGCGCTGCTGAACAGCGGACTGGAGCCGCAGCCGGTGAGCCTGACCGTGACGCTGCC CCTGAGTGAGTATTACGACGGGGACTGCCAGCGGAACGAGGAGAACATACGACGCAAACGGGAAAACCTG ATGCGTGAGCTGGTTCTGAATAAGGGCAGGGCATTTACCGTAACGGACGTGAAGGTGATGCCGGAATCAC TACCGGCAGCGTTCTCCCGTCTCGCGGAGCTGAAACCCGGCCCCGCTGAGACCACCCTGATTATCGATCT CGGTGGTACCACGCTCGATGCCGGTGTGATTGTCGGCCAGTTTGATGATATCAGTGCGGTGCACGGTAAT CCGTCTGTCGGCGTGTCACAGGTCACCCGCGCAGCTGCAGGCGCGCTGCGTGCGGCAGACAGCGAAACCA GCGCCCTCATCGCTGACACTGTCATCCGCAACCGCAATGATCGTCAGTATCTGCAGCGTGTGATCAACGA TGCCGGTAAAATCGACGAGGTTCGGAACAAAATAACAGAGGCGATCACTTCCCTGGGGGCGCGTGTCACC AGTGAGCTGACGGCCTTCAGGAACGTTAACCGGGTATTCCTGGTCGGGGGAGGGGCTTCCCTCATAGAAG AAGCTATCCGTCAGGCCTGGCCTCTGGCTCCTGACCGTATCGAGGTTATAGGCGATCCGCAGATGGCGCT GGCCAGGGAGATTGCCCTTTACAATAAAGAGGACTAAACGTGCCGGACGGCCAGTATTCTTTCTATCTGC ACAGCGACGATCGCACCGACATCGCGGCAATGGCAACCATCAGCACCATCTCACAGCCCCTGCGCGGTGA GTTCATCCGTACCGCCGCCACCGCCGGGGCGGTGGTATACCAGGTGGATGCCCGTTTACCGGCGCTGATC CCGGTGTTCTTTGCCGGGCAACTGAGCGCTGTCCGCCTTTGCGCCGTGATGGCCCTGGTCTCCGGAACCT GGTCCTCACTCACCGGCCTTCCGGATGAGCCCGAAAATGGTGAGGCAGCTCTGCCCGTGTCACCGGAGAC AGAATACCAGCGCCGGCGTTACACCCTGACGCTTCAGAATGGCCGGAGTGGGGAACGGGTGGAAAGTGTG CTGACGGAAGCGTCATCCCGTCTGCGTGGGGATCTGCTGAGAAACCTGATTATCACCGGTCTTGCCCTCC ACACGACGGCGCCTGAACTGCCGCGCCTGCTGGCCAGTATGCCGGTACCGCCCACCTCGGTCAGTGAGCT GCAGGCTCTGGTTCAGCAGATGGCCGGCACCGCTGACGTGAACAGGGCTGCAGCTGCAGTACCGGATACG CCGGCAGCATCTGCCGCGCCGGTGTCCGGGGCGGATACCCGGGAAATAAAGAAAAATATGCGGCGTGCAT TCGGTGACTAACAGTACGAATCACATCCACTACTATACCGATTTCAAATGACTGGCATCCCAGGGCGGTT CTCATGTCACCAGGATTCAGAAATGTTCTCCGTCTCGCCCGCATTCCCGTCGACAGCAGTGAACCGGTGC GAAGAAAATTTGGCAGCCGGCTGATTGGCATTGTGACGGTATGTCTGCTTCCGCTTCTGGTTTTCGACGT TCCGCAGTGGGTTTTCATTTTGTCGCAGGTCATCTGGGGGGCGGGCGTCTATATTGGCCTGTCCCTGGCC GGGGATAAATCCCTGAACCGCTGATACAAACTTTCCGGTTGTTCAAAAAAAGAACAGACGTGGTGGCGTC TGTTCTCCCGCGCTTCTCCGTCGTTTGCCTTCAGGTTATCCACAATTTTAAGCCCCGGATTTGTGGACAG GTATGCCGGTAATTCCCCGTTCGCCTGGAGTTAACGCCAGCCTGCCGCCCGCTGCCAGTGTCTCGCGTCC GGTCTGGTACGGGACGGGCGGTTTTTCCGCTCCGGCCCGGCGTCGTTGAGAGTGTACGCCAGTCCCTCGC CCTTTTAAGGAACGCCCTTCAAGCCGCTTTCGCGGCATATCCTTGCCGTCCAAAAGACGGACGGCTGCGG TATTCCACGGTCGGCCTGACCCGTGACCGGACGCGATGAACAGGCAGCGTGCGGCAGGGAACGGTATCGC GGTGATGCCTCCTGCCCCCTCAGACTACAGGAGTGCTGCCATGTCCAGATTCATTCTCGGGAACTGTATT GATGTGATGCGCGGATTCCCCGACCGTGCCGTGGACCTTATTGTGACCGATCCGCCTTACCTCGTCGGTT TTAAGGACCGTCAGGGCAGACAGATTGCCGGGGATGTGACGGACGAATGGCTGCAACCGGCCACGCTGGA GATGTACCGCGTCCTTAAAAAAGACGCGCTGATGGTGAGCTTCTACGGCTGGAACCGTGTGGACCGCTTT ATGGCCGCGTGGAAGGCGGCAGGATTCTATGCCGTGGGCCAGCTTGTGTTCACCAAAAACTATGCCTCCA ACCGTCGTAACGCCAGGGCCCGACGCGGATTTGTGGACTACTGCCATGAAGGGGCTTATGTCCTTGCCAA AGGCCGCCCCGTGCCGCCCCTTAAACCGCTGCCGGATGTGCTGCCCTTCCCGTATACCGGTAATACCCTG CATCCGACGCAGAAACCAGTGGAGGCGCTACAGCCGCTGATTGAGTCATTCAGCGCTCCGGGCGCGATTG TTCTCGACCCGTTTGCCGGAAGCGGTTCGACCTGCGTCGCTGCATACCGTGCCGGACGCCGCTATATCGG CATCGAAATGCTGGCGCAGTACCACCGGGCCGGAACCGAACGACTGGCCGCCATGCACCGGGCCGTAAAT ACCCCGGCGGCGAACGATGAATGGCTTCCGGAGGCCGCGTAATGAATTACGACGGACACGAAGCCCTGCG CCGCGATATGGCCGGGCTGGCGAACAATCTTTGCGACCTGAAAACCACCCTGAAAGTGCTGGAAGACACG TACCACTACCGGTACGACGGACTGGCGGAACGGCTTGCCGGTATCAGTCTGCGACGTCTCAGCGTCCTGA TGGATGAGGCGTTCAATATTGCACTGATGCTCGATGAAAGCTTTCTGGATTGAGGAGAGAACATGTACGG AACCCGTGAAGATCTTTGCAGGATGCTGAATGAGCAATATCCCGCAGAAACCCCGCTGAACCTGATTATC TGGACCCCGGCGGATATTGAAGCACTGGCTGACGGGATGGAATATTCCTTTTCAGAACATGACGTAAGGG CAGTACTGGAACGCATGGACACTATACCGGAAGAACAACGGCTTGAGTCGGGCGTGTCAGCCGGCCTGGT GATGGCACTGATAGACCAGGTGAAAGAGAACGGGCAGAGGGTGACTGTGCCGGTTGACCTGCTTGAAACC CTGCTGATTACCGCCGAACAGGCATTGTGGGACAGGGAATGGACCGCACGGGATCGCAATCTCCCGGTGC CGGAAAGCGTAATGCGCCGCCTGGCGGATACAGCAAAAGTGCGGGCATTACTGAAAAGCTGACAGCAGAT CGCCCCGCCACGCGGCGGGGTGATATAACCCGGACAGAGACGATAATGATGAAAAAAGAAACCCTTAACA CGCTTATTCTGCGTCACGGCGACCGGATGCTGCGCCAGGCTGGCTGGCCCGACACTGTTGATATGGCGCC CGTCGCCCCCGAAACCGTACCCGGCTGGCTTGCCGCCTGCGGCTCTCTCAGTGGCGTGGAAATCCTCACG CTTACGGAACAGCTTTGTCAGCCGCTGACGTATGGCCGGGCAGCGTTGTTGCTCGCCAGCGCCCGGCGGC TGGCGGGAACCCCGGCTCGTCTGCATCTCTTTCCGGTGCAGGCATATCCGCATCCGGAGCGGCTGGCTGA CTGTCAGGTTATCCGCCTGCCTTACGCTCAGGAGTGGCTGACAGCGGCGGAATGTGACGATCTGCTGGCC TTCCTGAAAGCCTCCCTCACGCAGATATCGGAAATCGTCCACCGGGATACGAAGCGCATCGCCGCCGCGC TTACGCCGTCCGTCAATCCCCGTCTGATGGACAGGCGGATCGGTGACTGGCGCTTGCTGGCCGTGGAGTA TGATCATGATAACTGCCTGGACGAAGACGAAACCGACAGGCTGGATCAGGTCCTCGATGCCATTCTGATT CGCGATGCGCGATTCTGCCCGGTCCTGCTCACCCTGGTTAACGAGCGGGAGGAAACTATCAGGAGCGCAG GGGTTATCGCTGATCAGCTGCGTTTTACGGACACTCCGGTCCGGCGCTGGTTTGATCGCCGGGTTTTAAG GGAAATGGTGAGAGAGGCCCGCGCCAGCAGAACTCAGGAGTGACAGCCCGGAGCGTCAGGGGAGGGGGAC CCTCCCTTGTCAGCCTGCCGGCACAGGAGGTGTGGTGCGATAAGGATGTCGCCGTGCCGGCTCCGCGTCC ACCCGGCCCGGTTTCCGGGCCTTTTGGGTGAACACAACCCTCTGTTATCGCCGTGCCGTGTGCTGGCTGT GCCGTGCCTTCACTTTAGCCCGGCAGCCGCAGAGGCTGGAGTTCGCTGGCGCCGCCATCCCCGGATAAGG CAGTCGCCGGCTTGCCGTTGCCGCCGGCTCCGCTTCACCCGGCCCCATCCCTCCGGTCCGTGGCCTTATT ACTGCGTCTGTCGCGTTGCGACATCTGCTTCCGCTTTTCTCCCGGTGGTCGAAAAACGGGGGAGAGAAAC CCTGTATTCAACCTCCTGCATCGCGACGGGTAGTGCCGTGCCTTCACTTTAGCCCGGCCGCTGCAGATGC AAGGGTGCGCTGACGCCGCCATCCTCGCCCGGTCGCAGGTTTTTTATGATGCTCGCCGTTCTTCCCGTCG TTTTCTCGCTCAGGTTTCGCTCGAAAACCGTCCAGACCAGCTTCGCGCTATATCTGCGCTGCGGCCTCCG GTGTCGCCCCTGCATCTTCCGCTTTTCGCCGGGCTGTCGTGTCGGCACGGCACAACCCGGTGCCGCAGTC TATGTGATTACGGAGGTTTATCCATGCAGTATGTGAATACATGCCCGGTCCTGAATGTTGAGGAGTCCGA CCGCCTGTCTTTTATGCCGTACCTGTTCGGCACGGATTTCATGCTCGCGGAATTACAGGTGTACGCTCTG GCCAAAAAATGGATGCCCGAATATGAGGGCGGCTTCTGGCATTTTATTCGCCTGCCGGAGGGGGGCGGCT ACATGATGCCGGATTGTGGCCGGGTACATCTGGTCAGTAGCGAAAACTGGTTTGATCGCACTGTCAGCGC CGACGCGGCGGGCATTATTCTGACCAGCCTGGCGATTAATCGCCGTCTGGCGGCCCATCATGACAGCAGT AACCCGGCGCTGACTCGCCTTTATATGCTGCGTGATGCCCAGCTCTGGAATCACATCACCTTTCACCCCG AATGCAGTGCTATTTACGCCGCGCTGGACTGATTAACGACCGGGGCGGTTACACCGCCCCGCAGGGAGAC AAAAATGACTTCATCAGTAACCGTTCCGGCCGTCTACGTGGGCACATATCACCAGTACAACGGCGGCAGT ATTTTTGGCAAATGGTTTGATTTAACCGACTTCGACGACGAAGACGAATTTTATGACGCCTGCCGGGCGT TGCATGCCGCCGAGGATGACCCCGAGTTTATGTTTCAGGACTGGGAAGGGATCCCGTCTCAGTTTGCCTC TGAATCCTCTGTTAAGTGGGCGTTTATCGAGGCATTCCGGCAGGCGCAGGACGAAGGACGCGCTGCCGCG TTTGTGGCCTGGGCGGACTATACCGGCGAGTGCGACTATGACGCCTTTGATGAGGCGTATTGTGGCGAGG CTGAAAGCGAGGAGGATTTTGCTTATGGCTTTGTGGAGGATCACGGCCTGTTAAACGAGGTGCCTGAATC CCTGCGCGTCTATTTCGATTATGAGGCTTACGCGCGGGATCTGTTCAGCAGCGGCTATGTCTTCCATGAA GGCTATGTATTCAGCAACTGA
Region | 1 |
Region Length | 12.2Kb |
Completeness(score) | incomplete(30) |
Specific Keyword | integrase,recombinase |
Region Position | 10-12280 |
# tRNA | 0 |
# Total Proteins | 11 |
# Phage Hit Proteins | 9 |
# Hypothetical Proteins | 0 |
Phage + Hypothetical Protein % | 81.8% |
# Bacterial Proteins | 2 |
Attachment Site | no |
# Phage Species | 8 |
Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Cronob_ENT39118_NC_019934(2) PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2) PHAGE_Salmon_SJ46_NC_031129(2) PHAGE_Salmon_SSU5_NC_018843(2) PHAGE_Mycoba_UnionJack_NC_028802(1) PHAGE_Rhodoc_CosmicSans_NC_028677(1) PHAGE_Rhodoc_RGL3_NC_016650(1) PHAGE_Strept_phiARI0004_NC_031920(1) PHAGE_Gordon_Nymphadora_NC_031061(1) PHAGE_Mycoba_Charlie_NC_023729(1) PHAGE_Halomo_phiHAP_1_NC_010342(1) PHAGE_Mycoba_Squirty_NC_026588(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Rhodoc_RER2_NC_016653(1) PHAGE_Burkho_phiE12_2_NC_009236(1) PHAGE_Pseudo_YuA_NC_010116(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Pseudo_MP1412_NC_018282(1) PHAGE_Mycoba_Theia_NC_028960(1) PHAGE_Sodali_phiSG1_NC_007902(1) PHAGE_Entero_P88_NC_026014(1) PHAGE_Staphy_vB_SepS_SEP9_NC_023582(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Staphy_Stau2_NC_030933(1) PHAGE_Pseudo_M6_NC_007809(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 18.18% |
GC % | 53.42% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
>2 94539-107499 ACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCT TACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGC ATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTA TCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTC AGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTG ATGGGGAGCCCGCAGAATTCGGAAAAAATCGTACGCTAAGGTTTTCCGGGCATCCGTAAGGGCCGAAACT TCCCGTCTTCCAGTCTGCGGCTCTGCCGCCAGACGTAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAG CGGCGACAGGAATTGCAGCAGCTCGCCGTCCACCGGCTTGCCGGCCTCGACCAACCCCTGGGTGGCGCGT TCCAGGTACACCGTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCGCTGGCCCGGTAGCGCT GCTGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCGCCCTGGCCAGCGAGTTGCG CGCCTCACCTTTGTTCAGGCCGGCATGCACGCGGCGGCGCAGTTCAACACTTTGCAGCCAGTCCAGGATG AACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCAGGGCCACGGCCAGTCCGTTCTGGCGCGGGTAGCTGC CGAGCTTGCGCAGCATCAGCGAGGCGGTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCAGGATGTC GTCCCAGTGGGCACGCACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGGGCGCAACGTCGGGTAGGCT TGCACGCCCTGCGGCACGTACAGCTTGGTTTCGCCGAGGTCGCGGATGCGCGGCGCGAAGCGGAAGCCTA GCAGGTGCATCAGGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTAGTGCTCCTCGATCCGCAG GTCGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGAATCGCGGACGCCGACATTCACCACGCGG GTGCTGAACGGCGCGTACTGGTCGGAGATATGGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCG GGTTGACGTGCCCGGTGCTCTCGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGT GCCGTCGCCCCAGTGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAAGGCCGCCGAA TAGGTTTCGTCGCGGATGTGCCAGGCTTGCAGCCAGGACAGCTTGGCGTAGGTCAGGCCGGGGCTCGACT CGGCCATCTTGGTCAGCCCGAGGTTGATCGCATCACCGAGGATTGCGGACAGCAGCAACGTCCTGTCTTT GGCCTCGGCCCCGTCCTTCAAGTGGGTGAAGTGGCGGCTGAAGCCCGTCCAGTCGTCCACGTCCATCAGC AGTTCGGTGATCTTGATGCGCGGCAGTAACTGGCTGGTTTGGTCGATCAGCGCCTGCGCCCGATCCGGCA CCGCCGCATCCAGCGGGGTGATTTTCAGCCCTGACTCGGTGAGGATGGCATCGGGCAGCTCGTTGTCCTT GGCCAGGCGGGTGACGGTGGCCAACTGCTCGTCCAGCAGCTGCAAACGCTCTTCCAGGTACTGGTCGCTG TTCGGGTTGATCGCCAGGGGCAGGGCCTGCTCGCGCTTGAGTGCGGCGAACTTCTCGGCCGGCAGCAGGT AGTCGTCGAAGTCGCGGAACTGCCGCGAGCCCTTGACCCAGATGTCGCCGGAGCGCAGGGCGTTCTTCAG CTCGGACAGGGCGCAGATTTCGTAGAATTTCCGGTCGAGGCCTTCCGGGGTGATCACCAGCGGCTTCCAG CGCGGCTTGATGAAGGCCGTGGGTGCATCGGCCGGCACCTTGCGCAGGTTGTCGGCGTTCATCTCACGCA GGGTCTGCACGGCTGCCAGCACGCCTTGCGCGGCCGGCGCGGCGCGCAGTTCCAGCACCTCCAGCAAGGC CGGCGTGTAACGGCGCAGGGTGGCGAAGTTCTCGCCGACCAGGTGCAGGTGGTCGAAGCCTTCCGGCCGG GCCAGCAGCTCGGCCTCGCTGACGCTCTCGGTGAACTCGTCCCAGGGAATCACCGCCTCGATGGCGGCAT AGGGGTCGCTGCCGCTTTCCTTCGCTTCCAGCAGCGCCTGGCCGATCCTGGAGTACAGGCGCACCTTGTC GTTGATCGCCTTGCCCTGCTTCTGGAACTGCTGCTGATGCTTGTGCTTCGCGCCGCTGAACAGCTTGACC AGGATGCGGTCATGCAGATCGACCAGCTCATCGATCACGGTCGCGGTGCTCTCCAGCACCACGGCGGCCA GGGTCGCGTAGCGGCGCTGCGGCTCGAACTTACCGAGGTCTTTGGGCGTCATCTGCCCACCCTCGCGGGC CAGCTTGAGCAGGCGGTTCTGGTGGATGTGCCGGCCCAGGCCTTCGGGCAAGTCCACCAACTGAAATGTC TTCAGCCGCTCGATGTGTTCCAGCATGTGCCGAGAGTTGGGTTTCAGCGGTGCCTGGCGCAGCCAGGTCA ACCAGGTGATGCTGCTGCCGGCCTTGAGCTTCAACAGCTCGTCCAGCTTGGCCCGATGCGAGTCCGTGAG TGGTTCGACCAGGGCGCGGTAGACCCGCCGATTGGCTCGCGCAATGGCTTCCGAGCAGGCCCGGTCAATC ACGCTCAGCGCCGGCAGGATGCGTCGTTTCTGCCGTAGGCTCTCCAGGGCCTGACCGGCCAGCAGCAAGC CTTTGTCGGTCTGCTGGGCCAGCTCGGTTAGCTCGCGCACCAGGGCGCGGAAGTCGGACAGGCCGAACGG GGCCAGTTGCAGGTAGGTGCGCAGTTCCTGGGCATGCTCGCGACGGGTCACGTCGCGCTCGCCGTACTTT GCCCAGCTCGCCGGCTCGGCCTGGACTTGCTTCGCCACCCACAGGATGACCGGCTCGGGCAGCTCGCTGT CGGTTCCCAGCGCGTAACCGGGGTAGCGCAGCAGGCAGAGCTGCACGGCGAAGCCGAGGCGGTTGGCGTC GCCGCGTCGCTGGCGGATCAGCGACAGGTCGGAGTCGTTGAAGGTGTAGTAGCGGATCAGGTCATCCTGG CTTTCCGGCAGCGCAAGCAGGGTGTCCCGCTCCGTGGCCGAGAGGATCAAGCGACGCGGCATGTGTCAGT CGTCCGTGCGGAGGTACTGGTAGAGGGTTTCCCGGCTGATGTTGAACTCGCGGGCAAGCTGCGCCTTGGG CTCGCCGGCCGTCGCTCGCTGCCGCAGGGTAGCAGCCTGCTCATCGGACAGGGCTTTCTTGCGGCCCCGG TACGCGCCACGCTGCTTGGCCAAGGCGATGCCCTCACGCTGCCGCTCGCGGATCAGGGCGCGCTCGAACT CAGCGAAGGCCCCCATCACCGACAGCATCAGGTTGGCCATCGGCGAGTCCTCGCCAGTGAACACCAGGCC CTCCTTCAGGAACTCGATGCGCACGCCGCGCTGAGTCAGCTTCTGTACCAAGCGACGCAGGTCATCGAGG TTGCGGGCCAGCCGATCCATGCTGTGCACCACCACTGTATCGCCTTCGCGGACGAAGCTCAGCAGCGCTT CGAGCTGGGGGCGCTGGGTGTCCTTGCCCGATGCCTTGTCGGTGAACACCTTGCTCACCTGGGTTTGTTC CAGCTGGCGTTCCGGGTTCTGGTCAAAGCTGCTGACCCGGACGTAGCCGATGCGGTGCCCCTGCACGATG TCTCCTTGGTTGAAGGCGGCTTAAGTGCACTTTCTGTTCCGTTGTGCCTCAAAGCCCATTTCTGTCAGGC TGAAATCTATAACCTTCGCGGGCATGTGTCAAAAAATGGGAAAGCAGACTCTATTCTGACGAAGCGGCGC GGCCCTGCCTGACATCAAGTTAGGGTATAGCCTAGATTGACATGCGCGATGCAACCCTTAACTTGCTTGC ACCTATCGTTTCCATGCTAGCTTTATCGTAACGCTAAGGAAGCTCTGAAAAAGCCCATGTTTCGCGAAAT CACCGCTCTGTAACCCGCATGGTTGCTGGGATGCATTTCTCGAGCGGGGGCTTTTTCAGACCTTCCTTAG CTTAGCGTACGATTTTTTCCGAATTCTGCGGTTCCCCCTGGAAGACCTACGCAAGTTGGGCCAGCTCAGA GGTGGAATCAACGAAGGCGAGCGAATGAGGCATCTTTTCTGGCGTCTTAACTTTCTCCTTCTCTCCGGGG CAACAAACAGCGCCCAGATGTACCATGAGGCCGCCGCTCTTTCCTCCGAGCTGGATACTCGTTGGTCTTA CCGCTCCAAAGAGCTTATGACGCTCTACAGCAAGGCGAAATCCTATGAGGCTGGGGAACGTGTCGAGTTC GGCGGAAAGTCGTTTGCACCGCTATACACGCCCAAAAACGACACGCTGATCAACCTATTCCAGATCTCAC AGCAAGAACAAGAGCAACTGAAGACGATTATCAGCACTGACGAGGCTCAGAAGCGCCGCAGAGAGCGCGA TAGACTGCGTGATGAAGAACGTCGCCGCGCCGCTGGCCAGCTTGAGCGTGAAGCCTATGAAGCCAACTCA TTGAGCAGGCAAAAGCCCTGGGAAGCTATGGGCATGAGCCGGGCTAAATGGTATCGCCTGGGCAAGCCTT CACCTCAACAAAACAGTGAGACAAGTCCCTCCCCTATTACTAATGGCGAAGCCTCAGCGGTTGCCCTTCA GGCGGCCAGGTGTAAAGCCGTTTAGATGGCTATTTCAAAGTGAGTGAGATTTCGTAACGGATGGCAGCCC TAGAGGCTGCTTTCTTTTGAGGGGTTAGCAGGCGTATAGCCATGCTGGATCTCAGTCTATCACTACCTGC TTAATATTCCACCTTTAGATCCGGCAGCAGTTCGACCAGGTGGCCAACTTACCAGGCACCGGCAGCAGCT CGACCGGGTGGCCAAGTTCAGATCTGGACGCCAGAAGGAAATCAACCAGGTGGCCAACTTACCAGGCACC GGCAGCAGCTCGACCAGGTGGCCAAGTTCAGATCTGGACGCCAGAAGGAAATCAACCAGGTGGCCAACTC ACCAGGCATCGGCAGCAGCTCGACCAGGTGGCCCATTTCGTACGTACGAAATCAGGCGACGCTATGCGAA ATCTTGGCGGCAATCCCCCGCGACTACGTGATTTTTTTAACGTAGAGCGCGCTTTTTCTTGCCATAGTAG GCCATTTTGGCCTATAATCTTAATTAAGAAGACCGGGCACCCGCCACGGTCAATACCGGAGAACTCCGAT GATCCACACAGCTAACCGCACCTTTCACCAACTCTATCGAGAATGGATACGCGAACGCCGCGAGCATATG CACAACGTTTTGACCTGGGAGCGTGATCGTTACGGTGCTCGCCTCGTCGGTCTGTTTTATCGTTACTGCA AGGTGGCCAACCCCTTTCCCCGTTGCACTCTGAATACTCGGATCAACTACCGCGCCCATGCGGTGAATCT GCCAGATTGGCCAGCCCGCAGCCTGGAGCTGAATAAAATGTGGCTCAGTTGGAGAGAAAAAAAGTAGGCC GATTTGGCCTATTTTTTATTGTACCCGCTTGACACAATAGGCCAAAATGGCCTATTATATATCTCAGAAG GCCGGGCACCCGCCACGGTCAATACCGGAGAACTCCGATGATGCAAACAGAACTTAATCCCCTGATCTGC TCCCTGGTCGCCACCCCTCGCCGTATGGCTGCAATGCCCCGCTATGTAGGCCGTTTCTATGTGGTTTTCG AGTCGATGCTTTACCAGCAAATGAAAGGGCTCTGCCGCGAGTATCGCGGGGCTTATTGGCTTATGTGGGA GCTGTCGAACGGCGGCTTTTATATGGCTCCTGGGCGTCGTGATGAAATGCTGAACATCGAGGCCATGAAC TACTTTAGTGGCCAAATGAGCGCCGATGCTGCCGGGATTACCGCTTGCCTCTACCTCTATAGCCATCTGT CATTTCACACAGAAGGCGCTGACCAGGAGCGGTTTTCAAGGCTGTATCACAGCTTGCGGGATTGGGCTTG TGAGCATGACGAAAAAGAGGCCATCTTGGCCGCAATAGACTAGCAACAGAAAGCCCCGGTGATGGCCGGG GCTCTTAAAGGAGGTGCATAGGTAGAAAAAGAAATGGTGCCCCTGGTATGGCTGCAACCAATCACAGGGG CTTTCACCGGTCAATTTGAGGATAAACGCGATGAATACGGATATTGTATCACTTGCAAAACACATTGGCG ACGCTCTGACGGCCCGCCGCCCCGTTCATATGCCGCGCATGAAGATGCGGGAGCTTGGCTTGCTCTTGAT TGAACTGAAGGCGTATCGGGAGGCCGCCGCGACCGTTACCCATTGATAAAAAAGCCCCGGCATTGACCGG GGCTATTTGAGGATTTATCGCATGATTAGACCTGAAACGCTTAGGCCGTTCGCTGAAGATTGGCAGGCTC CAACCGCCGATGAAATCAAAGAGGTGTTGGAGCTGATTAGGCAACGAAAAGGGCTTAGTAAGCCTCTCAG TGGCGTTGATGTCGCTGATCTCGTTGGTTTGCCTGGTGAGAGAGGCAGCGGAAAGGGAACCCGAACCTTC AGGCGTTGGGTGAGCAAAACCAACCCTAGCCCTATTGCTTATGGTGCCTGGTCTATCTTGGCCCACCTGG CAGGTTTCGGGGCTATATGGGACGCTGACCGGGATTGAAACCATGACCGAACATAAGGCCGAACGTGCTC CCTGGGGAGACTTCCCGGCAGTAGTGAGGAACGGCGATCTAAAGGATCTCTCTAAAGAACCTGAATACGA AGCCGCCAAACATGGCGACCACAAGGCGATGAGCTATAAGCGCATGAAGCCGGCCGAGGACGAATTGCAT TGCGAGATCAAGGCGCTGCTTGATCGCGCCAAGGCTACCGACGACCAGGAGCGTAACGAGCCGGAGCTGG ACATTCCTGCCGAGATTTCTCGCCGCGAGAAGCGCCTGGAGGCGATCCAGGCGGCAAAGGCGCGCCTGGA AGCGCGCCAGCGTGAAGCGGACCAGGCCCGGGGGCGCAGCGAAGACGATGGCCGCCGGCCTCGCCATCCG GATGGCTCGGACAAGGGCGGTGGCTCGTACAAACGCGAGTTTGGTGTGCCGGATGACCGTGATCAGGAAA GCTTCACCGATCCGGACAGCCGGATCATGAAACACGCCGGTGGTGGCTCCGAGCAGAGCTACAACGGGTA CACAGCGGTCGATGCCGAGCACCAGATCATCGTGGCGGCGGAGTTGACCAACTGCGCCGCGGACAGTCAG GCGCTGCTGGGCATGCTGGCAGCAGTTCAGGCCAACACCGGAGAAATGCCGGCCCAGACGCTGGCGGATG CGGGATTCCGTAGTGAGGCTGTTCTGGCAAAGGTCGCCGATCACCACGGCGATGTCATCGTTGCCCTCGG CCGCGAGGGACGTGAAGATGCCAAGGTCAATGCCAAGACCCATCCGCATACGGCGGCGATTGCGGCGAAA TTGAAAACGGAGCAAGGCGATGCAGCTTACCGCCGGCGCAAGTCGATCGTGGAGGCTCCGAATGGTTGGA TCAAGGCGGTGATGGGATTGCGTCAGTTCAGCATGAGGGGCCTGGACAAGGTGCAAGCCGAGTGGAAGCT CGTCTGCATGGCGCTAAATCTGAGGCGAATGGCGTATCTGTGAGGGCGAAGGTTAAATGGGGCGGCTCAA ATGCACCCCAGTCGTCATAACACGCCGCGCGCCGCAAGATTGGTATCCTTGGCGCCGACGCCTTGCCAAT TGCAGAGAGCGCCGCCGCCATCGTCAGTGCTCTACAGAAAACCGGTCACACGGCTCTGCCGCGCAGACTC CTAGCCTAAATGTGACAGTGGTTGGTAATCCATGCCGCCCGCAAGGGCGGCGGTGGTGGGCCAATAGATG ATTTTCAGAGCCTTACTGCCCGTTGACGCCCAATCCCTCGAGCGCGAGTCTAGCCGCAGCGGCGATGACG GCCTCGCTGTGCTTGTCATCCTTGTTAGGCGCCCGGGTGTAGACGGCCAACACAATAGGTGCGCGCCCAG TGGGCCAGACGACGGCATAGTCATTTGCCGTGCCATACACTCCGCAGGTTCCGGTTTTGTCTCCGACTGC CCAGTCTGCCGGCACCGCCGCGCGGATGCGGTGGTTGCCGGTCGTGTTTCCCTTTAGCCAATCAACAAAC TGCTGCCGCTGCGGCGCAGCCAGTGCAGAGCCCAGTGTCAGTTTTTGTAAGCTTTCCGTCACGGCGCGCG GCGATGAGGTATCGCGCGCATCGCCTGGGATGGCGGAGTTCAGCTCCAGCTCCCAGCGGTCCAGACGGAA CGTGGTATCGCCGATAGAGCGCATGAAGGCCGTCAGCCCGGCCGGGCCGCCCAACTCCTTCAGCAACAAA TTGGCGGCGGCGTTATCACTGTATTGCACGGCGGCCGCGGACAGCTCCGCCACCGTCATGCCTGTTGTCA GATATTTTTCCGAGATGGGTGACCACGGAACCAGCGCATTTTTGCCGTAACGGATGGGTGTGTCCAGCAA GCCGGCCTGCTGCTGGCTGCGAGCCAGCACAGCGGCAGCAAGAAAGCCCTTGAATGAGCTGCACAGTGGG AAGCGCTCCTCAGCGCGGTAACTTACAGTTGCGCCTGAGCCGGTATCCATCGCGTACACACCGATGGAGC CGCCAAAGTCCTGTTCGAGTTTAGCGAATGGTTCCGCGACGAGGTTGGTCAGCGCGGTGGCAGAAAAGCC AGCCAGCGGCCATGAGAGACAAGACAGCAGAACTAGACGGCGATACAGTGACATCAACGATATTCCTTGT TTGAAGGTGGAGCTAGGTGTAGCGGCCGGATGTAATCAGGCCGCTACAGCTGGGATTAGGGGTCTGACGC TCAGTGGAACGAAAACTCACGTTAAGAAGTCATTTTTCAATATTATTGAAGCATTTATCAGGGTTATTGT CTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCC GAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATTAACCTATATGTCAAGACCCGGCTG GTTATACACGCGTTTCCTGAACAATTCAGGGCGTTTTTCATGCCATTCCTTGAGCGCCTGAACGGGTGTT TTGTGTTGGAGCGCGCGTTGCGGAATGCTGTGGTTGTAGATCTTGACGTAATTGCGCAGCGTCGATTCCA GTTCGGCAGCTGAACCAAAACGGGTCTGGTTGACGATGTCGCTGATACGACCGTTGAAGCGCTCCACCAT GCCGTTGGTCTGCGGATGACGAGGCGGGATGAGCCGGTGCTCGATGCCGAGCTGCTTGCACAGGCGGTCG AACACGTGTGTGCCGCTGGGTTCCTTCTTCTTGCCGCCAGCCGTGAAGCGGTCGGTGAACTGGCTGCCGT TGTCGGTCAGAAGCTTGACGATCTTGACGGGACAGGCTTGCTGGACTTTGTTGAGGAAGTCGCCACTGCT GCCATCGGTCTGGTCGGCATAGAGCTCGATGAAGACCCAGCGCGTAGCACGGTCGATGGCAACGAAGAGA TAGCGCCTTGCCGTCTCGTCGGGCATCTGCGGCAGGTACTTGATGTCGATGTGCACAAAGCCCGGCTCGT AGTCCTTGAAGGTCTTTTTCGTGGCGGGCGCAGTGCCTTCCTGCTCGACCAGGTTACGTAGATCCGAGAC ACCGTGGCGGCGCAGGCAACGTCCCAGGCCGGCACGCGAGACGGCTGGATTGATGAACTCGCGCGTGACC GCCAGCAGGTCGTCCGTGGGCAGCAGCAACGTCTTGCGCAGCTCCACCACGATGAGCTCCTGCTCGGGCG TGAGCGTCGTGTACATCTTGTTCGGCGCATGCGACTTGTCTTCAGGAGACTCGCGGTTTTGCCACTTTCG GATGGTTTGGCGGGTGACGTTGTACATCCTGGCCAGTTCGGCCTGCGGGAGCGTCGAGTTCCTGATTTCC TCACGGATCAGGTGGGTAGTACGGGCTTGGCTGTGCAGTGCCTGGGTCATCGAGTTGCCAGTGAAGAGTC GGATTGGAACAGTGTACGCAAAACGTGTCTGGCCTTGAAGAGCGGCCAGCTACGCATGGGTACATGATCC CACGAGTCCAGACACCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTTCAAGAATTTTATAAACCG TGGAGCGGGCAATACTGAGCTGATGAGCAATTTCCGTTGCACCAGTGCCCTTCTGATGAAGCGTCAGCAC GACGTTCCTGTCCACGGTACGCCTGCGGCCAAATTTGATTCCTTTCAGCTTTGCTTCCTGTCGGCCCTCA TTCGTGCGCTCTAGGATCCTCCGGCGTTCAGCTTGTGCCACAGCCGACAGGATGGTGACCACCATTTGCC CCATATCACCGTCGGTACTGATCCCGTCGTCAATAAACCGAACCGCGACACCCTGAGCATCAAACTCTTT TATCAGTTGGATCATGTCGGCGGTGTCGCGGCCAAGACGGTCGAGCTTCTTCACCAGAATGACATCACCT TCCTCCACCTTCATCCTCAGCAAATCCAGCCCTTCCCGATCTGTTGAACTGCCGGATGCCTTGTCGGTAA AGAGGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAAC TCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGT GCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGC CGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTC AACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCC GTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAG CTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAG ATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTA CGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGT GATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTA CCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCC ATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCATCGGCGTAGTAGTGG ATGTGGTCGATGACAAAGCCGGTGCGGGTCAGCGTGCGCCGGAGGATCGGCAGAAAATCGACCAGGAACG AAGTAGCGCGTGTGACGACGGCCGGTACGCCGACACGCGCCACGGCCTCGGCCCAGCGCGCGGCCGGCGG TTGGAGCAGGCCGTTGTGCACCGAACCGTGGTAGGTGCCGACCGCCAATGTGAGCCAGCGCTCTAGCTCG CGCAGCGTCAGGGCGGCCTTGTTTTCGGAATCGTAGTCGCCGCGCTGGTCAGGGTTGGAGAAGGTCGTTC CCGGCAGTTCGTCGTGAATCATCTGCATCGCCGTGCCGATGATCCGTTCCACGATGCCGCCATAGTGCGG CTGTCCCAGCGGGCGATAGTCCAGCCGGATGCCATGCTGCTCGCAACCCCGGCGCAGGGCCTCGCTCTTG AACTCGGCCGCGTTGTCTAGGTAGAGCAGCAAGGGCTTGCCGCTCATCTGCCAATCCATTTCCACGTTCA GTCCTTCCAGCCAAGGGCGCTTGTCGCAGGCGACATGCACGAGGCACAGGCCAACCGAAACGGCAGACGG CGCTTCCAGCGTGACGACCATGCCGAGCACGCAGCGGGTGAACACGTCGATGGCGAGGGTCAGGTACGGG CGGCCAATAGGTTGCCGGTCGCGGTCATCGACCACGATCAGGTCGATGACCGTATGGTCTATCTGCACCT GCTCCAGCGGCGCGGTCACGGCAGGAGGCTCGCCGCCCACACCTTGTAGGTCACGAGCGGCATCCTGGCC TTCCCGCCGGCGGATGACCTTGCGCGGGTCAAGGCTAGCGATCCGTAAGGCCACGGTATTGCGCGCCGGC ACTCGCAGTTTTTGAGCCTTGCACACCTGAGTGACTTCGCGGTGAAAGGCCGCTAGGCTGCGCTTCTGCT TGGTCAGGAACCGCTTTTGCAGTAGCTCGTGGATGACGCGCTCGACCGGTTCCGGCAAGCGCCCCTTACC TTTACCTCCACCGGACTGGCCGGGCACCAGATCCGTCACGAGGCCGCTGCCTTGCCGGGCACGCCGGATC AGAACGTATACCTGGCGCCGAGACAAGCCCAGCGCCTGAGCCGCCATATCGGCCGCTTCGTGCCCGACCG TCTCCGACTGCGCCAACGGACTGATGATCTCCGCACGACGGCGCGCACGCTCCCAAGCCTCATCAGGCAG AGTGGCCACGCCTTGTTCTGGAATCCGTGGGGTGTCCGTCGCCATGCTCACCTCGCTTTGGTGCACACGA GTATTGAGCAT
Region | 2 |
Region Length | 12.9Kb |
Completeness(score) | incomplete(40) |
Specific Keyword | transposase |
Region Position | 94539-107499 |
# tRNA | 0 |
# Total Proteins | 7 |
# Phage Hit Proteins | 6 |
# Hypothetical Proteins | 0 |
Phage + Hypothetical Protein % | 85.7% |
# Bacterial Proteins | 1 |
Attachment Site | yes |
# Phage Species | 5 |
Most Common Phage Name(hit genes count) | PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Spirop_SkV1_CR2_3x_NC_009987(1) PHAGE_Staphy_phiPV83_NC_002486(1) PHAGE_Spirop_1_C74_NC_003793(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Pseudo_YuA_NC_010116(1) PHAGE_Pseudo_M6_NC_007809(1) PHAGE_Pseudo_MP1412_NC_018282(1) PHAGE_Staphy_Pvl108_NC_008689(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 28.57% |
GC % | 59.22% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|KX236178.1| Klebsiella pneumoniae plasmid pHS091147, complete sequence. 121348, gc%: 52.81%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 11 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 10..804 | PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; -; phage(gi764159894) | 5.35e-07 | Showinfo_outline |
2 | complement(1591..2220) | PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; -; phage(gi89886027) | 1.73e-30 | Showinfo_outline |
3 | complement(2795..3745) | PHAGE_Entero_P1_NC_005856: RepA; -; phage(gi46401683) | 1.19e-107 | Showinfo_outline |
4 | complement(4139..5410) | PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; -; phage(gi431811050) | 0.0 | Showinfo_outline |
5 | complement(5410..5841) | PHAGE_Cronob_ENT39118_NC_019934: protein umuD; -; phage(gi431811072) | 5.10e-34 | Showinfo_outline |
6 | 6075..7046 | PHAGE_Entero_P88_NC_026014: recombinase; -; phage(gi744692717) | 4.25e-77 | Showinfo_outline |
7 | 7049..7720 | stbB; - | 0.0 | Showinfo_outline |
8 | 8375..9151 | PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; -; phage(gi100063) | 5.77e-27 | Showinfo_outline |
9 | 9855..10622 | inner membrane protein; - | 0.0 | Showinfo_outline |
10 | 11303..11731 | PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; -; phage(gi162135127) | 1.06e-13 | Showinfo_outline |
11 | 11774..12280 | PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; -; phage(gi966199624) | 1.84e-12 | Showinfo_outline |
>10..804
KlebsiellapneumoniaeMNNLVPVGSPASPGTLLPVAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLVPPYPFVQLATLKQRTEKAARTAGRAPAGSQVHRLVPLSDHHYVSQLQMMVATLKIPLERRNKRTGRMEKARIWEITDRTVRTWLSEAVEAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPEAEAVALIKKLTPNQST
>complement(1591..2220)
KlebsiellapneumoniaeMMIIVLGSQKGGVGKSTLAVSIAAYLMSLGNRVIIVDADDQKSVLTWYNNRPEDLPHIPVTGATGNIKAMLKEHEKSYDFVIADCAGRDSAEMRSGLMAADVFISPLRPSQMDLDVVPHTCSVFTAAKDFNEDVRGYLVLNMTPTNMFVNEANQAADVLKDYPEMRLANSRVCDRKAHRDAWAESMTIFETQNDKAQQEIESLVKEVIL
>complement(2795..3745)
KlebsiellapneumoniaeMNGYNYMNENVYIGEVIGPDCESVNNKLTVTSKATVQPVALMRLNVFVPSSRPAKGTRTSIDATSVLKDLEFSRREGYDDIRITGERLSMAIDFKVWVGIIEAFSKYGLKTNSIKLTFHEFAGMCRFESKRFDSRLRKSISEALTRIRGKTITFTRSDSEGLQKVSVTGLLKTGELDFANDQVELEADQRLWELYQTDYTVLLRHKPINALTRKEAAQALYTFIESLPTNPVPISFKRIRDRLSLLSPVKEQNRIIKLALKQLQDIGYLDHSITKKGKETFILIHRRSANPNPGTLYRWFQPMHRNRCVDRSLFYI
>complement(4139..5410)
KlebsiellapneumoniaeMFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSAEAKPWIKMGTPWFQIKNERYPEKIYAFSSNYELYASMSARVMNCLEELAPRVEQYSIDEMFLDLTGVEHCMGLEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFGVKITEYESLRQAICQHAERASEKLRKEHQYCRHISVFIKTSPFAIKEPYYGNVATEKLLTPTQDTRDIIAAATMALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMRVLDGINNSGLGKVWFAGRGIAPSWQMKRDMLSPAYTTRWRDIPVARIG
>complement(5410..5841)
KlebsiellapneumoniaeMKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDELDIFGVVTHIIHRPREMY
>6075..7046
KlebsiellapneumoniaeMNIYCDDGSTNVKLAWFEGDELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAPDRIEVIGDPQMALAREIALYNKED
>7049..7720
KlebsiellapneumoniaeMPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGEAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPAASAAPVSGADTREIKKNMRRAFGD
>8375..9151
KlebsiellapneumoniaeMNRQRAAGNGIAVMPPAPSDYRSAAMSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
>9855..10622
KlebsiellapneumoniaeMMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVNPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWFDRRVLREMVREARASRTQE
>11303..11731
KlebsiellapneumoniaeMQYVNTCPVLNVEESDRLSFMPYLFGTDFMLAELQVYALAKKWMPEYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAAHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
>11774..12280
KlebsiellapneumoniaeMTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFRQAQDEGRAAAFVAWADYTGECDYDAFDEAYCGEAESEEDFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
Region 2, total 9 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 94539..94586 | attL | 0.0 | Showinfo_outline |
2 | 100386..100811 | PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; -; phage(gi162135127) | 1.17e-25 | Showinfo_outline |
3 | 101140..101436 | transcriptional repressor protein KorC; - | 0.0 | Showinfo_outline |
4 | 101441..102421 | PHAGE_Staphy_Pvl108_NC_008689: putative transposase; -; phage(gi119443708) | 1.17e-06 | Showinfo_outline |
5 | complement(102671..103552) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; -; phage(gi100066) | 2.88e-94 | Showinfo_outline |
6 | complement(103828..104808) | PHAGE_Spirop_SkV1_CR2_3x_NC_009987: hypothetical protein; -; phage(gi160688404) | 1.73e-09 | Showinfo_outline |
7 | 105395..105442 | attR | 0.0 | Showinfo_outline |
8 | complement(105444..106160) | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708) | 2.64e-53 | Showinfo_outline |
9 | complement(106195..107499) | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23501616) | 1.16e-33 | Showinfo_outline |
>94539..94586
ACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGC
>100386..100811
KlebsiellapneumoniaeMMQTELNPLICSLVATPRRMAAMPRYVGRFYVVFESMLYQQMKGLCREYRGAYWLMWELSNGGFYMAPGRRDEMLNIEAMNYFSGQMSADAAGITACLYLYSHLSFHTEGADQERFSRLYHSLRDWACEHDEKEAILAAID
>101140..101436
KlebsiellapneumoniaeMIRPETLRPFAEDWQAPTADEIKEVLELIRQRKGLSKPLSGVDVADLVGLPGERGSGKGTRTFRRWVSKTNPSPIAYGAWSILAHLAGFGAIWDADRD
>101441..102421
KlebsiellapneumoniaeMTEHKAERAPWGDFPAVVRNGDLKDLSKEPEYEAAKHGDHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
>complement(102671..103552)
KlebsiellapneumoniaeMSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ
>complement(103828..104808)
KlebsiellapneumoniaeMTQALHSQARTTHLIREEIRNSTLPQAELARMYNVTRQTIRKWQNRESPEDKSHAPNKMYTTLTPEQELIVVELRKTLLLPTDDLLAVTREFINPAVSRAGLGRCLRRHGVSDLRNLVEQEGTAPATKKTFKDYEPGFVHIDIKYLPQMPDETARRYLFVAIDRATRWVFIELYADQTDGSSGDFLNKVQQACPVKIVKLLTDNGSQFTDRFTAGGKKKEPSGTHVFDRLCKQLGIEHRLIPPRHPQTNGMVERFNGRISDIVNQTRFGSAAELESTLRNYVKIYNHSIPQRALQHKTPVQALKEWHEKRPELFRKRVYNQPGLDI
>105395..105442
ACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGC
>complement(105444..106160)
KlebsiellapneumoniaeMELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>complement(106195..107499)
KlebsiellapneumoniaeMLNTRVHQSEVSMATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Click on a region in the genome above to show details here.
ORF Start: 10
ORF Stop: 804
Strand: Forward
Protein Sequence: MNNLVPVGSPASPGTLLPVAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLVPPYPFVQLATLKQRTEKAARTAGRAPAGSQVHRLVPLSDHHYVSQLQMMVATLKIPLERRNKRTGRMEKARIWEITDRTVRTWLSEAVEAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPEAEAVALIKKLTPNQST
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: PHAGE_Mycoba_Squirty_NC_026588 non-functional integrase, -, phage(gi764159894), PHAGE_Mycoba_Squirty_NC_026588
Homolog/Ortholog E-Value: 5.35e-07
ORF Start: 1591
ORF Stop: 2220
Strand: Backward
Protein Sequence: MMIIVLGSQKGGVGKSTLAVSIAAYLMSLGNRVIIVDADDQKSVLTWYNNRPEDLPHIPVTGATGNIKAMLKEHEKSYDFVIADCAGRDSAEMRSGLMAADVFISPLRPSQMDLDVVPHTCSVFTAAKDFNEDVRGYLVLNMTPTNMFVNEANQAADVLKDYPEMRLANSRVCDRKAHRDAWAESMTIFETQNDKAQQEIESLVKEVIL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Sodali_phiSG1_NC_007902 ParA-like protein, -, phage(gi89886027), PHAGE_Sodali_phiSG1_NC_007902
Homolog/Ortholog E-Value: 1.73e-30
ORF Start: 2795
ORF Stop: 3745
Strand: Backward
Protein Sequence: MNGYNYMNENVYIGEVIGPDCESVNNKLTVTSKATVQPVALMRLNVFVPSSRPAKGTRTSIDATSVLKDLEFSRREGYDDIRITGERLSMAIDFKVWVGIIEAFSKYGLKTNSIKLTFHEFAGMCRFESKRFDSRLRKSISEALTRIRGKTITFTRSDSEGLQKVSVTGLLKTGELDFANDQVELEADQRLWELYQTDYTVLLRHKPINALTRKEAAQALYTFIESLPTNPVPISFKRIRDRLSLLSPVKEQNRIIKLALKQLQDIGYLDHSITKKGKETFILIHRRSANPNPGTLYRWFQPMHRNRCVDRSLFYI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Entero_P1_NC_005856 RepA, -, phage(gi46401683), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 1.19e-107
ORF Start: 4139
ORF Stop: 5410
Strand: Backward
Protein Sequence: MFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSAEAKPWIKMGTPWFQIKNERYPEKIYAFSSNYELYASMSARVMNCLEELAPRVEQYSIDEMFLDLTGVEHCMGLEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFGVKITEYESLRQAICQHAERASEKLRKEHQYCRHISVFIKTSPFAIKEPYYGNVATEKLLTPTQDTRDIIAAATMALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMRVLDGINNSGLGKVWFAGRGIAPSWQMKRDMLSPAYTTRWRDIPVARIG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Cronob_ENT39118_NC_019934 DNA polymerase, -, phage(gi431811050), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 0.0
ORF Start: 5410
ORF Stop: 5841
Strand: Backward
Protein Sequence: MKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDELDIFGVVTHIIHRPREMY
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Cronob_ENT39118_NC_019934 protein umuD, -, phage(gi431811072), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 5.10e-34
ORF Start: 6075
ORF Stop: 7046
Strand: Forward
Protein Sequence: MNIYCDDGSTNVKLAWFEGDELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAPDRIEVIGDPQMALAREIALYNKED
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Entero_P88_NC_026014 recombinase, -, phage(gi744692717), PHAGE_Entero_P88_NC_026014
Homolog/Ortholog E-Value: 4.25e-77
ORF Start: 7049
ORF Stop: 7720
Strand: Forward
Protein Sequence: MPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGEAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPAASAAPVSGADTREIKKNMRRAFGD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 7049, stbB, -
Homolog/Ortholog E-Value: N/A
ORF Start: 8375
ORF Stop: 9151
Strand: Forward
Protein Sequence: MNRQRAAGNGIAVMPPAPSDYRSAAMSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Staphy_Stau2_NC_030933 hypothetical protein, -, phage(gi100063), PHAGE_Staphy_Stau2_NC_030933
Homolog/Ortholog E-Value: 5.77e-27
ORF Start: 9855
ORF Stop: 10622
Strand: Forward
Protein Sequence: MMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVNPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWFDRRVLREMVREARASRTQE
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 9855, inner membrane protein, -
Homolog/Ortholog E-Value: N/A
ORF Start: 11303
ORF Stop: 11731
Strand: Forward
Protein Sequence: MQYVNTCPVLNVEESDRLSFMPYLFGTDFMLAELQVYALAKKWMPEYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAAHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Pseudo_YuA_NC_010116 hypothetical protein, -, phage(gi162135127), PHAGE_Pseudo_YuA_NC_010116
Homolog/Ortholog E-Value: 1.06e-13
ORF Start: 11774
ORF Stop: 12280
Strand: Forward
Protein Sequence: MTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFRQAQDEGRAAAFVAWADYTGECDYDAFDEAYCGEAESEEDFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Rhodoc_CosmicSans_NC_028677 ArdA, -, phage(gi966199624), PHAGE_Rhodoc_CosmicSans_NC_028677
Homolog/Ortholog E-Value: 1.84e-12
ORF Start: 94539
ORF Stop: 94586
Strand: Forward
Protein Sequence: ACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 100386
ORF Stop: 100811
Strand: Forward
Protein Sequence: MMQTELNPLICSLVATPRRMAAMPRYVGRFYVVFESMLYQQMKGLCREYRGAYWLMWELSNGGFYMAPGRRDEMLNIEAMNYFSGQMSADAAGITACLYLYSHLSFHTEGADQERFSRLYHSLRDWACEHDEKEAILAAID
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Pseudo_YuA_NC_010116 hypothetical protein, -, phage(gi162135127), PHAGE_Pseudo_YuA_NC_010116
Homolog/Ortholog E-Value: 1.17e-25
ORF Start: 101140
ORF Stop: 101436
Strand: Forward
Protein Sequence: MIRPETLRPFAEDWQAPTADEIKEVLELIRQRKGLSKPLSGVDVADLVGLPGERGSGKGTRTFRRWVSKTNPSPIAYGAWSILAHLAGFGAIWDADRD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 101140, transcriptional repressor protein KorC, -
Homolog/Ortholog E-Value: N/A
ORF Start: 101441
ORF Stop: 102421
Strand: Forward
Protein Sequence: MTEHKAERAPWGDFPAVVRNGDLKDLSKEPEYEAAKHGDHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Staphy_Pvl108_NC_008689 putative transposase, -, phage(gi119443708), PHAGE_Staphy_Pvl108_NC_008689
Homolog/Ortholog E-Value: 1.17e-06
ORF Start: 102671
ORF Stop: 103552
Strand: Backward
Protein Sequence: MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Salmon_SJ46_NC_031129 hypothetical protein, -, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 2.88e-94
ORF Start: 103828
ORF Stop: 104808
Strand: Backward
Protein Sequence: MTQALHSQARTTHLIREEIRNSTLPQAELARMYNVTRQTIRKWQNRESPEDKSHAPNKMYTTLTPEQELIVVELRKTLLLPTDDLLAVTREFINPAVSRAGLGRCLRRHGVSDLRNLVEQEGTAPATKKTFKDYEPGFVHIDIKYLPQMPDETARRYLFVAIDRATRWVFIELYADQTDGSSGDFLNKVQQACPVKIVKLLTDNGSQFTDRFTAGGKKKEPSGTHVFDRLCKQLGIEHRLIPPRHPQTNGMVERFNGRISDIVNQTRFGSAAELESTLRNYVKIYNHSIPQRALQHKTPVQALKEWHEKRPELFRKRVYNQPGLDI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Spirop_SkV1_CR2_3x_NC_009987 hypothetical protein, -, phage(gi160688404), PHAGE_Spirop_SkV1_CR2_3x_NC_009987
Homolog/Ortholog E-Value: 1.73e-09
ORF Start: 105395
ORF Stop: 105442
Strand: Forward
Protein Sequence: ACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
ORF Start: 105444
ORF Stop: 106160
Strand: Backward
Protein Sequence: MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 2.64e-53
ORF Start: 106195
ORF Stop: 107499
Strand: Backward
Protein Sequence: MLNTRVHQSEVSMATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23501616), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.16e-33
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
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