Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1070128893 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1070128893.PHASTER.zip
gi|00000000|ref|MEBR01000087.1| Klebsiella pneumoniae strain CMC_VB6753 plasmid pIncFIB 88735, gc%: 43.43%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 7Kb | incomplete | 10 | 10 | 794-7847 info_outline | PHAGE_Escher_Av_05_NC_025830(2) | 44.83% | Show info_outline |
| 2 | 7.1Kb | incomplete | 10 | 10 | 29689-36880 info_outline | PHAGE_Burkho_KL3_NC_015266(2) | 47.01% | Show info_outline |
Region DNA
>1 794-7847 TCATAGGTTAACTTCATCTGGTTTAATGCCGCCGTCACAATGTGAGATGCCAGGGCCCTGCAGAATGGTG ATGGCGCGAGTTAATGCCATGCGCTCACCACTTTGAAGAATCCGAGCAGCCTCTGCGCACGAGGACTCTG CTGAACCGGCACGTTCAAGAAGATTTTTTACGTTATTTTCGTAAACTCTGCAGTCTTTATCCAGCTCAGC AATACGCTGCAGGGCCTTCTCCAGTGACTCTACCAGCGCATCAACGTAACCAGCGGCACGAAGGGCAAAC TCCGTGATTGATAGCTCTGCGTCAGTTTCTTGCCCGTAGCTTTCGCATTCCGAGACAACGGCAAAATAGT CGGAGTCGATCTCGTTATTTGCCAGGTGGCGTAGCAAATTGGCCGTTTCATTTCCGTTTGCGATGAGTAG ATCATGGCTCTGCGGTTGTTCGGTAATATCGGTTCTCTTGCTGCACTCAAATGAATTGTTCATGGTTATA TTCCGTATGAGAACGTGCGACCTAGAAAAGTAGAAACATGTCACTGTAAACCAGGTTATCATATTAAAAC GTTCCTGCAACTCCTATTATCTTATCATTTATAAAGTAACTTTCTGGATTTATAAGGTGGCAACCTTCTG TAAAGTTGGTTGACTAAAAGCGAAGCTTTGTAGTGTGGAGGAAGTATTAACTTAAGTGGATAATTTTAAA AATCAAGGCAAACACTCGAAAAAAACCTCGGATGATAAAAGCATTTTTTATTAAGCAGGCCTTCGACCTG CTTTTTCGGAATGAGATAAAATGAAAGCTTCATTATCGCTGGTGGGAAAATTAAATATCGTCGTCAGGAA ACTCTTGCTGGATGGCATGGACCAGTTCAACCTTATGCTCACGAGTTAAATCACCCCATGCAACTTTAGC CAGTGGCGCTTCGCCATCAGTTGTTGCTTCAATATATGACCATAATTTTCTGTAAAGTTCTTGCCCCACC CCATCGAGACATTCAGCTACTTCATCCACTGTCCAGTGGTTCAGAAGTTCTGGCATAGCTATGTCATTAC CAGGGCAATCGTCTGAAGAACAAAGGTCTGCGTCATGATAAATGCGACCGCAATGAACGCACTCAAAATT TGATAGAGGAATTTTTGGTACAGATACATTACTCATGATCATATCTCCAATATTAAGTTTCCTGCTTTAT AAAATACAATGACGTCAGAACCCGGATACTACCAGTGCGGTGATATCCGTCATGTTCGCCCCCGTTTCAA TGCCTTGTGAATTTGCTGCATCTGCCGCAACGTACTTGCATGACCCTGCCTCGGATGACATCCGCTAAAC TTGGTATGTTCGCGGTCGTAGTCGTTAATTAAATCTTCCATTGCGGTGATGGCCAACTCGATTGCACTAG CAGCAGCTCGTAACTTTGCTCTTCTATATTCTTTTACAACGGTGGAATCATTCATGAGCGATTGTCTCGG TTAATATCCTTTTTCTTTAAACCCAGGATACTACTTTGGAACTCATGTGCAAGCCCCTATTTGCAGGTTC CAGGAAAGCAAATAAGGAATGTCCATAAACACTGGAAAATAATGAGCGAAGAATAATATAGTTTCGCGAT CAGTATGATGACTACAAAAAGGTGAGTATGAAGATCTTCATTATCGACGAATACCTCCCCGCTTATGCGG GGTTCTCTCTAACAGAGAGTAGGAAAGTAACTTTCTATCTGACTGCCTGTGACATCATTCATCCTTTATG ACAGCCCGGCACGCTTCTCGCAGTACCCTTTCAACGGCATCTTTATAAGCTCCCGTTTCTACTGGCGGAT TTTCACGCTTAACCTGCTCATAAAATGCTACAGCTTGTATCAATGCATCCGGCACTAGCTTCGCGTGCCG ATAGAGCGGTATATCCCCTGTCTCTGAGTTCTGCTTTCCCCAAATCAGAGAGGTTTCTCGGCCCATGGCA ATATGATGAAGGTTTCGTTCGTCTGTAAACACTACCGGCTCGCCGTCCATTGCGGTCAGCGCCATGCGGG CCACTCTCTTAAGAATCTCGATGTCGGCGAGCCCAAGTGTATAACCAACTTTTAGATCAAATACAGCCTG AATATTTTCGTCTCTACTCATGCATCCGCCTAAAAAATCTAAGTCCAAGTGATTCCAGCAGGGGGAGAAC CTGTTTTTTGTTATAAACCGGATAATAGTGGTTAGCTGCCTACTTATTTATAACTTCCGTACCACCACCC GTCCCCGCCATCAGTCAGGGATATTCGGCACTTTCCCACTGCATTAAATACGCTAACCGAGCAACTGAAT ACGCCCTGTCTTTGAGTTACCGTCACTCCGTTCTCGTACTCGCCAAGACGGATAGTTTTATTATCCTCAT CAATCTGAATGTCTATTTTAGTTCCGCGCAGTCCAGTGTCCTTAGTAATAAGCCCACCAGTAGCACCAGA TTTTGTCTTTCTAAACGAAACGAACTTAGAACCTGGCACTCTTCCGCTACGCTTTGGTATTGTTCCCAGT TGAGATATGAATGCCATCTATTCAACCTCCATCTTGATGCCAGCGGCGGCCAGCAAAACGGCCTCTACTA CCTCCATGGACGGTGTACCCTCCCAACATTCGCATTGGTCATCGTACCCTATTGCGTTCTGAACTTTGCT GATAAATTCTGGATCAATTTTCCAACCCGGGTCAGAATCTTTAGGTTTCGGCAGCTGCACGGTGCGGGAC TCCAGCTCTGCAATCTTTCGCTGCTGATTTAATAGCGTTCGCTGGGCTATGAATAACTGGCCTCGTGCCA GTTCATTCTCGGTTTGCGTGTTCTTCAGCGCCTCCCGAACGTAACCATCTGGTAATTCCGATGAGATGCA AGTCAGCATGCGGATAATAGCGGAACCGCGTGCGGCATATTCAGTAATGGATACGTCAGAGCCAGTGTCG ATATCAGCGATCTCAAAACGTAAATCTACTGTGTCGCTATCAATATCAGTAGCCTCAAAGCTACCGATAA GCTCTAATACAGCGGCAACATGCTCGACCTCATCCGCCACTACCGGCTTGCTACTCATCGCGGCCAGCGC CAGCTTGAAAGCAGCCAATGTGTTGCTGTCAGTGATGCCAGCGCCTTCAATTGCTGAAATTTGATGCTGT AACCACTCTCTGCTTAAGGTTTCTGTTGTCATGATTTAGCCCTCACCCATCCCTTAGTTGTGCTGCGGAT TACACCAGCTTTACGTAGCGCCTGGAGTCGGCGATCGAGAATGCGAAAGGGCTCAGGTTTATTCTCCTCC GTTGCAAGTCGGATACATTCTTCTGCAACATCTTTGACGTACAGACTGGAAAATGGCGTTGGATGCCCGC TAATTTTAGTCAGTATTTTTGAGTCAAGCTCGTTATATTTTGTCATTGTCAGATTTCTCATGTTTTAAAT TGTCTATGCAGAACTGAGTAAGAACTCTGGCCTTCTCACCAGTAATTCTATACCGGTATGGATTTCCAAA GGTGTCAATCGTGTCGCCGAGTGCGTACCAGTCGTCAGTGTAGGGGCACGATTCGAATTTTCGTCCATCC CCACCAGTGACATAACGATGACGACGTGTGATCCCCCTGCGTGTGCAACTCCCGCCCTGCCAGCATGTCG CACCAGTTGGGTAAAAATCGCGCTTAGCCATTACTCATCTCCATCGAAGGGTCTGACTCTCCGGATGCGA GTTGCGGTTACGACCGCACTCATTACTGAATTAGCCTTCTTCTTTGCCCCCACCATATTTAAAATATATT GGGAAAAATCCGTGCGAATTGAGTGACGGGTGTGGGGTACTCGCTGAGTTGCTTTAGCTGAGACAAAGCA CCGTTTATTTCTGACTGTGTCAGTTCGGTGAAATCAGTCATCTCTGCTCTCTGCGATAATTTCTGAAATC AAACGTTCCACGACCCAATAGTTTATATTTTGAACTGATGGGAAACGCTTATATCTTCCGCCTCTGCCAT TTCTTTGCCCGCGCTGAGCATTTAATCGCCGGAGTACGCCATTGTTGATTTTGGGTGGCAGTGCGGTGAT ATCAGTTTTCATACTATACCACCTTTGACGCGGGCGATGGCTTCACGCGCAGCCCATACAGCATGTTTGT CAGGAATGACTACTCCGCTTTGCTTTCCATCCCGGTCACGTTCGCCAGTGTCGCAAGCAGCAGAAAGGGC TTCAAGGGCTATCAATAATTCATCACGTTGTCCTGCTACTTTCAAATACTCAGTCGCGGCGGTAGCCATT TCGGCTTTATGCTTCTTGTAAGCCTCATAGGCATGCCAGGACTGGCCTTTACGCACGCTGGTGGTTATGT CTGCTACCTGGTCTGGCGTAAGCGTGGTCAATGGCTGTGCCGGGTAAATCAACACCTGACCGGCACTCCA GTCGAACCCGGCCTCGATGGACTCGACTTCTACTGATGGAGTAACTCCGACACTTCCCGGAGAGTGGATG ATGATCGTGACTTCAGGATCGCGGCGCTGGTTGATTTTGTTTGCCCATATGGCAGTTATCAGCTCAAAGA ATCTGGAAAATTTCATACAACGCTTCCTCAAAAGAACTTCACACTAGATTTGCAGAAATTTTGCAGGCTA TGTCCGGCAAGAAGTGGATGTAGTTTTATGACAGACAAATTAACTTACCTGGCCGGACTTTTTGTCTGCT TTCATTTTGTGATATACAGCCCAGCTCAAAGCATCCAGTTTTTTCAACCCAGCCTTGTCATAAAGGAAGA TCCCATTATTACAGGCGTGTTCTTCTTCAACTTTCTTTTTTAGTTGTTCTAACTGGTCATATGTGAGCGT CGAAAGCTTTACCCGGTTCCAGCCAAAATTACGAATGTGAGTGGCCATTTATTAGCCTCCGTTACCCAGT AAATTTTATTCGCATTAATCACCAGGATAGCAACTTAGAACTCCCAGTCAACCCCTCTAAACACCCTATT TGTCATTAATTCATAATCACTGGAGCACTTAGCAGCAATGTAATAAAGCATGACATTAATTACGTGATTA TGTTTACTTTGATTGTAATGATGGATCCTTATAATCAATAGATGCAGATACGTTAGAAAAGAACGCCTCC CGGGTGTGGCTGTTAAGTGCACGAGCGAAGGTTGCATTAAGCACCTCGGCATCACTGCCATCAGTAATAT AAAGTGCGATTTTTGTAGCAAGCCGTGCCTTGGCTTCTTTTAACTTCATATCACGACAGGCACGGGGAAT ATATTCCGCAATCTGGGCAATAGACTTTTCAGTTTGGTTAAACATTAAAACCCCCTCGGCATTCATGATA TTAACAATGCCATTTCAAAAAAAATGCGTCCCGCTTAATAGTGTTATTGAACCCGCACACAGTTATAAAA AGGTAAAAAGTTACTTTCCAGGTAGTCAGACGTTCCGGCGGTTATACGTCACTTTCCAGTCGTGATAATC TTTCCCGTCATTAAGAGGGCTAAGTTTGACGACATTCTCCGCCAGTCCATTCATCATCAGCACGCGCTCA ATGCCAGAAAACCAGTCTTCCTCAGAGCTCAACGGGAACCAGAGATTATGATTAGCACCACTTAGGAGCT CATCATTACAGAAATGAATCCCTCTGCCATATTTTGTCACACAGCCGGTGACAATCACTTCATGTCGAAC GTCATTGTCGGTTGCAGGAACATCTTGCTGTACCGAACTATTTCCGTTTTCTATGCCCATTTGCGACTCC TTGATTTTCTGTTTAGCGTTTTATATATAGCCCCCGCCACGACAGGTTGTTAGGTCCTGGTAAAGAATTG TTACCAGTCCCACGCAATAAGTTCATCCACAATATCTGCGTCACGATCAAAGTGAACACATTCGAACCCT GCGTTAAGTACTTTTTCGATATTTTCGATTGTGGGCCAGGATATACCATCATCACGTAAATGTTGTTTCC ATTCCTGATTATCACAAGTTATCCGAATAATGTAACCATATTCATTTGCGTGAATCCAGTTACGACCACT TTCAGAACGAGGATTATAACTGGCTTCAGTTAATAACACTGCATCATCTTTAGAAATGTGAGCTGTGCTG ATAACAGCGGTGGTATAGCGTTCTTTAATTTCAATAGCCATGTCATGTTACCTGTATAAATAGTAGTGCA AGGGTATAAAGTTAGAATTAATTGTCATACTCTGGATGGTAAAGCATCAGGGTATCTACTGGCCACAATC TCATTAATTTTGTCAACGAGGTCTGGACGTGTGAACGTCACATGAGCGGACCCTTTCCAGAAAGATTTAA TAGTGAACCACTCACAGGTAAACACACCGTTTAACGTATAACTGTTTAAGTTGATAAAATCCCTGTACTG GCTTCCTTCCGCTATCCGTGAATCTGGAACGTTTTTATTGTCGATAAGGCAGAAAGCACGGGCGAGATCA TTAATCCAGTTTTGTGCATTAGTCCTTACCGAAGCGTATCGGTTTCGCGAGATATTTATGGATAAAACAC CTTCGAGGATAATTTTCTTGCCCAGACGGCAAGGATTATTTGTTTTGTAGTCCCAGGACAGCTTACGGAA AACGTCAATAATACCAGTTACAAATGTTTCGTTCTTTGAGGCATGAAGATGCTGAAACGTACTGATGACA TTGTCCAGAGTAACTTCAGGGCATTCTTCACTGTATACCTGGTCAGTCCATTTATCATGTTGCTCACTAC TCATAAATGTAAACATCCCTGTCTGGGTCATCAGGCGCGTCCAGATACTGCTATCAACACAACGAGCCAC CCTGCGGCGTAAAGCCTCTATTTCATTTTCTTTGCGGCAACGCCTACCTGACGCCACAATCTCATCCAGC CCCGAGAACCAATCCTTTTCAGCAGCAGCTGCGAACAACAATTCTGCTTCTCTGAGTTTCTCTAAACCTT CCATAAACGCCGCAATGCCAGCAGTACGTTGAGCAATGATTAAATCAATAGGTACTGAAGGAATAATATC TCCTGTGTTCTCTGATGTATTTAATTCATCAATCAATGTATTTTCGATGGACAT
Region Details
| Region | 1 |
| Region Length | 7Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 794-7847 |
| # tRNA | 0 |
| # Total Proteins | 10 |
| # Phage Hit Proteins | 9 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Escher_Av_05_NC_025830(2) PHAGE_Salmon_SSU5_NC_018843(2) PHAGE_Vibrio_pYD38_A_NC_021534(2) PHAGE_Aeromo_vB_AsaM_56_NC_019527(1) PHAGE_Escher_PA2_NC_028449(1) PHAGE_Shigel_Ss_VASD_NC_028685(1) PHAGE_Entero_Enc34_NC_019524(1) PHAGE_Entero_mEp390_NC_019721(1) PHAGE_Marino_P12026_NC_018269(1) PHAGE_Pseudo_PEV2_NC_031063(1) PHAGE_Entero_VT2phi_272_NC_028656(1) PHAGE_Pseudo_LUZ7_NC_013691(1) PHAGE_Entero_mEp460_NC_019716(1) PHAGE_Entero_P88_NC_026014(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Pseudo_phi2_NC_030931(1) PHAGE_Pseudo_KPP21_NC_029017(1) PHAGE_Salmon_SETP13_NC_022752(1) PHAGE_Salmon_SPN3UB_NC_019545(1) PHAGE_Salmon_SEN34_NC_028699(1) PHAGE_Pseudo_JBD44_NC_030929(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 20% |
| GC % | 44.83% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 29689-36880 ATGAGCCTTCTGGCGGAGTGGTTGCAAACAAAGTGTTCTGCGAATGTTTGGGTATACGTTAAGCGCTTAT CCGCGAACGATACCGGTGCTACAAGATCCCACCAGTCTGGTCTTTACATGCCGGGAGCCGTCATTGATGA GCTGTTTCCTTCCCTCCGTGATACTCAGTTAAGAAATCCTGAAGCTCTTTTTTCTGTTCACGTGTCATCT CATCCTGATTGCCCTGACCTTGATGATGTAAGGGCCATTTACTACAACAATAAATTTTTCGGGGGCACCC GTGATGAAAAGCGTCTGACGGGCTTTGGTAGACAAAATCCTCTCCAGAATCCGGAGAATACCGGCGCTCT GGCACTTCTCGCCTTCGACCATGTGCCTGGAACATCATCCAGTTATTGTGATGTCTGGGTCTGCAAGGAC CTGACCGAGGAAGATATTCTTGAACCAATTATTGGTGAAGTTATCCCGGGAGCAACGATATTTGGTCCGG GAGATAAAATAATTGGAGGGTTCGTTACAGAAACTTCTCCTGGCAGAACAAAGTATAAGCTTCCACCCGA ATGGACTCACCACTTCCCTTCAGGAAGGGAGATTATTAGTTTTGCCGCATGTCATTACGATAGAACAGCT GACGACCCGGACTCACAACTGACGCGGAGGAGGAAAATTGAGTTTGAAATTTTTCTTGCCGTTGAGGAAC TGCACGTGCTGGGTCAGATAGCCGAAGGCTTTGCTACGGTGAATGATTTTATTACGCTTGCTAATTCAGT GAGTAACCGGAGGAAGTCTCGTGCCGGGAAAAGTCTTGAGCTCCATCTTGAATCTCTTTTCAAAGAACAC GGTGCAACGAGCTTTGAAACCCAGGCTATCACGGAAGGTAAGAAAAAACCCGATTTCATCTTTCCTTCCG GTGCTGCCTATCACGATCCTGATTACCCAGCTGAACGGTTACGCATGTTGGGGGTTAAAACCACCTGTAA GGACCGCTGGCGGCAGGTACTGAATGAGGCTGACAGAATTGATACAGTACACCTGTTCACCGTACAGCAG GGCGTCTCTGTGGCCCAGTTCAGGGAAATGCAGTCTGAGGGGATACGGCTCGTTGTACCGGTAGGGTTGC ATAAGGCCTTTCCTGAGGAAATCAGGGGTGAGTTAATGTCACTATCTGCGTTTATTGATGAAATCAAAAA ACTCTATTGGTGACATCCCCTCACATCTGGCGAGAGTCGTATGCGCATGGGATGATACCAGCATAGATAT TTGAAGAGCCCCTTGGGGCTCTTTTAGTGCATTTATTTCCGGGCCTTTACAGCCTCGATGATCCGTGACT CCAGCAATTTCGCTACTGCATCAAAGACCGGCACGATGACGGAATTTCCGAACTGGCGGTAAGCTTGAGT ATCGGATACGGGGATTCGAAAAGTTACTTTCCCTGGCTGCTCAAATCCCATTAGCCGGGCACACTCACGC GGTGTTAGACGCCGAGGACGTCTGGCCATGTTATCAGGGTCATTAAAGTTTTTTTCACCGAGTTCGCTAT CCCAACCACGATCAACAAGCGATTCACTGCCATCTTTGTGATACCTTGCTGATATTGTTCTGGAAATCGC TTTATCATCGTCTGGTTTAACCAGGCCAAAGCCAAAGCCATTACCTTTCTCTTGGTGTTTTTTGGCGTAT TTATAGAGATAATCCCACAGCTTTGGCGTTAGTGTGTATTTATCATCAACATCACTGTCAAGGAGTTCTC TGAACAGCACTTTTCTTTCAGGAAACAGCGAAGAAATGTCAGCAAGGCTAAATCCCTGACTTAAATTCAG GTCACGTCTGAAGCCCACCAGAACAATACGCTCCCGGTGCTGAGGGATGAAATGCTTACCATCTATAACT TTTGGATCATCCGCACCTGTAGCTTCAGCATCAGCAACGTCGTAACCGAGCTCATTCAGGGTATCCATAA TGACACGGAAAGTTTTCCCTTTATCATGGCTTTTGAGGTTCTTGACGTTCTCGAGTACAAAGATGGCCGG TTTTTTTGCCATGATGATACGAGCCACATCAAAGAATAGGGTCCCCTGGGTGTCACATTCAAAACCGTGT TTACGGCCAAGTGAGTTTTTTTTGCTCACACCTGCAAGGCTAAAGGGCTGACACGGGAAACCAGCCAGCA GAACATCATGATCGGGTATCGATTTATCGATATGGGCGTAGGCATCTTCTTCGCTGACATCTTCCTTATG ACTGAGTGTCACATCGCGGATGTCCGAATTGAAGATATGCGCTTCGGGATCGCAGTACCAGTTTGCTTTA TAAGTTTTGACTGAATAGCTGTTCCATTCACTTGTGAAAACACACTGGCCGCCAATGGCTTCAAACCCAT GACGGATACCGCCGATACCGGCGAAGAGATCGATGAAGCGAAAAGCATAATTGGGATGGTTTGCTGGCGG CTGCGGGAGCAGTCTTTCAAGAAGCGATGCCTCAGTTACGGTAAGTGAACGTGGCCCACATTTCCCGTTA ATCCAGCGGTTCAGGGTCTCCCTGGTCCAGTCTGAATTTCCCAGCTTACGCAAAAGTTCGGCAACAAACT TCTGATCATAGATTTCAAGGACTTTCCCTATCAGGGACAGGTCCCTTTGCTGTTGTCTGGCCTCTTCATT ACGTGCCTCTTCCACCAGCTCTTCCGCAAGGGAATCAAATTCAGACATTATTGCCTCCACAGGTTATATG CGTGATATTCTATCACTCATTTAACCCAGCGCAAATAATATCTGTGATTTTAACCAGTATAACGTGCTCT GCCAGGCAGTACTCTCATTGGTTTTCCAGTCGATTCAGTATTCTTTTCCAGAAACACGATGTCGGTAGCT TTCCCAGTTAAACACTACCCATAGGCTGTTTCCGAGACGCATGCGGTCCATCACGCGCTCACCTACAAGT TTGTTCATCTCTTCCATATTGCTGTTAGTGAGCATCCCCGTAGGGCGTTTTGATGATGACCTGCGATCAA CAATCTGGTTGATGATAACTTTTTCATAGCGTGATTCTGTTTGCACTCCAATTTCATCAATGACCAGAAG GTCAACTTTACTGAGATCGTTCAGTAGTTGTTCTTCACTGGTATTCCTGTTGCCGAAGGTATCTTTCATG GACGACATGATGTCTGCAACCGTTATGATTAAAACTGACTTTCCCCGCAACAAGAGGTCATTACAGATTG CTGCTGCCAAATGGTTTTTGCCAGTGCCTGGTTTTCCAGAGAAAATAAAACTGGCGATGTTCCCCTCAAA TTCTTCTACATATTGGCGGGCGAGCATGAGTGCTTTCATTTGTCCCTCACATTCAACTAAGTAGTTATCA AATGAACAATTCTGATGCAGAGGACGTATCCCTGACCGGTTAAAAGTCCTTTGCATTTTCATAGCTCTAT TCTCGCGCTCAAGGGCCTCCGAGCGAAGCTGTCCCTGTTCCCGCTGCCATTGCAACAACTCCTCAGGTGA ATTGAATGCAGGCTCAACGGTCTTGGGCATCATTTTTCTGAGGCGTTTCATGATGTCGCCATTTTTGACA GGGCTCATAGCCGGGTATCCTCTGAAGAGTAGCTTTGAAAAAGCTTCTGAAAACTATCAGCAACATGCTC ATCTACTACAGCCTGGTGCCCTTCCACGTACTCCGGGGCCTCCCTAAGACCTTTGTATATGATACTGTCC ATACCGAACTGATCGGCAGTTATATCTACAATAAAGTGCATGCCATGAACGTTAGCGACAACCCAGTAAT GCCCTTTCATGCCTTCAGGGGTGACAATTCCGCCATCACCAACACCATCACCACCGGCGATACGCGTCCT GACCCCAGAAAATTTCTCCAGTAGCATGGAAACCAGAATCGAACCATACATGCAGGTTCCTGTGGTATCA GATGTCTTAAGAGTACTGGAGATTAAATTTTCAAAAATACGCCGGGACATTTCCACCACCTCATGCGGAG GAGAAAATTGTTGCGTCATTATGCCTCCTGTTAATGGTCAGCTGCAGGTACCTACATTTTATCTTTCTTA CTGGCTTGAATCTGTTTAACTATCAGCTCCATTTTGGAGCTTCTGTCCTCCAGGAGTTCACGCAGGTCAT CCCATATACCGACAGGTATTGGTCTGTCACCAGAAAGCCACTGCCGGATACGTCTGCCGTCCGACAGTCC AAGGGCTCTGGCGAGTTCTGTTTGCCAGCGCTCACCAAACAGCAACTGACCTGCACTGATGAGCAATCCG CGTCTGTTTTCGTTCTCATTGGTTGATTTCATATCTGGCTTCATCTCTGCGGGAGAGCTCCCATCCGGCG AATTGCCGAAATACTTTCCTCCACGCCAAAAAGATTCTCAGCTGGTGGTTTCTCGCCTGCAAGCTGGCAG GCGGTGCAGGCTGCATGATATGAGTTACTTCGCTCCCGGAAAAGAGCCTGGAGAGCGACTACAACCAGAG TACGGTCGTCACCTGTTAAATCTTCAAGTTTCATGCAAGCCTCAAAAGTTATGGGTCAGTAGGGGCTGAG AATGGTTAATCCTGATTAATACCGTACGCTGAAAAGTCCTGAACGTTTCCTGTCACAGCAGATAGAAGAC GGAGGATGTTCTCTTCTCCGATGACAGCGAGCGCGGTCGGCATCAATCCGAACTCATCGTTTGTCAGACC AATAGCCATTTTATGCTCGCTGTGTCGACTAGCCGACTCGATACGGTCTATGAAGACGTCAATGCAGCCA TCGATACCGCGTGCTGCGGCAGCTTTGGTCATATCACAGGCATGGTCCCCGTTCAGTACGAAAAACACAC GGCCATCCAGAACCAGAGCGGTTGTATCGCAGCCATACCCGGCAGATGAACTGTTATAGCTGATATGAAA GCGCTCAAATCCGCGAGTCATATTGGGCGCTGGGGTATTGATCACAGGAACAACATCTGAGGAAAAACCC AGCTTAGCTAATTGAGGGATAGTTGACATGAACGCCTCCTTAGGCAGTTAATGGGCGGCTCCGTAGCCTT CCCTTTCAAACAAATTGTACCTTATTTTAGGTACACTGCAACCCCTTTTATAAAACGACTGTTTTTTCGA AAGGTAAAAGTCGATACTCCCCCACTACCGGTCTAGATCCGACCGTATCTTTCCCTGGTTCCAAGATTTT AAGAATGTCCGTATGATAGGTGAGATTAGAATGCACAGGACCAGTTTGAATGTTTAATAGCCTTTCTGAT TATCTACAGCAACAACGAGATCGCGATGAGGCTCTGAAACGAAAACTAAGCCAGTTGAAGCCAACTGTTA GGAATGGCGAGGCAGGAGAGATAATCGCAGCGCTGATTGACCTCGGCTCAGTGGGGGGCGATTTTAAAAA AACGACGTACGATTATATCTATGAGTATTTTGCATCCGCCCGCTGTATTGATGTGTTGGTGGTAATGTTA TTCCTCAATATGAAGCATCCACTCTCCGATGGAGCAATAAAAAAAGCCTATGCAAGACAGTCCGACAGTG AAGATTCGAGGTCTGCTTACATAAGCTTGATAGTTGACACTATTGATAAACGCCGGTAATCCCACACTCC GCCGCTAACTGGCGTCTCCTTTTTTCCTACGAACGGCCATACTGACCTCCTCACGCAAAACAGAAATGGC CATAAGCTCAGCCTTTAGTCTGGAGGCAGCGAGATCAAGCTCTTTCCCATACCAGGCCAGGGCCTCAAGA TCAATGAGTTTTGTGTCGATGGTCGGAGGTAATTCAAGTAGTTCGGGTGGGGTGCTGCTTTAACAAGAAC AAATTAATTTCATCAATAGTATTGAACTCCCCAATGATGCTTTCTTCGTAATCTGGTCGCTGGGACTGAA CCACTAGCCTGAAGGGCGGTTCGTTAGAGTACATGAAGATAGGTTTCAGACGGGTATTGACCCATTTTGC CTGGGCGTCGTGAGCCAGGACACAAGCCTCTTCGTAAGTTCTTACCTTTCCAAGCACCGATGAGCGGTCC CTCGCTCCACCGTTAAGACATCTGTCAGTAAATGAGCCGTCTGGTTCAGTGATCCCATAAGGATGATCCC ACCATTCATCTAGCTGTTCTTTGCTTCGTTCACTATTAGGGGTGTCATCAAAATTGGCCGGAAGTTTTGG GTCAAGGGGGAGCTGAGATGGTATGCGTTTATCCGTTTTTACCATGTTGAGGCATTAAGCCAGATAGACG CGATACAATTACTGGTAGATGCATCAGACCAGGTAATGTCTATAATTGAAAAACCATGTATAACAGGGAA TGGGAACAATGCAAAAAAAAATGCTTACAGTGTTGATCTGTGCCACAGTCTTTCTTTCTGGCTGTAAGGA AGAAGGTATAACCCCAACTGGCAAAGCATGTATGGGCACCGATAATGACTCATTGATTGAAGGCCTGAAG GGGAAGTGCCAGAAAGGCGATACTATAGCGACAAAGAACCCTGCATATTTTTGTGATTTCAAAAGTCAGA TTGCTTTTAATAATTACAATAGTGCTATATGTATCTATACCGGAATGCAAGCTGAGGAACGGATTAAAGA AGCCGACATCAGTCCAAGAAAAGACAGCAAACCTCAATCCTGATAAGCCTCCCGGTGTGCCAAAAAATAA GAAAGCTGGGGTTCAAGTTCTTTTGAGGCATCGTACGCCTCAAACCAGAAAACCACAGGTTTCTCAATAA CCGTTACCAGCCCAAATCGTTGGGCTGTGCGGAAATTGACTGAGTATGCCTGAGCACGCTCAGGCTGGTG GGCAATCTGTTCCCTGAACCCTTCGATCGAATATGTCGCTTTGAAAAGGTTGCATGCTGAACACGCAGGG AAAAGATTATCTAAATCATGGCGATCAGGATGAAATACTCGTCCATTGCTTCGTGCGACGTGACTCACCC TACTCCCCTGGGGCGCGCGAACTATATCGAAATCTCTACGAACTGGCTCTACATGATCGGCATGCCAGCC CTTTTCCTTCAGCTCACAGCCGCAGTAGGCACACCTGCACGCAAATTTTAATCTGAGTTCTTCTCTTTGC GCTTTGGTGATTTTCGTTTTGGGTTTTTCTGTCCTGGTCTGCATCTCGGTTTTTACGGCATTGTTGTTAT GAGAGGGCAACTCTATGAGCTCCCCCCCCCTTTTGATTATCTTTTCAGACAT
Region Details
| Region | 2 |
| Region Length | 7.1Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 29689-36880 |
| # tRNA | 0 |
| # Total Proteins | 10 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 4 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Burkho_KL3_NC_015266(2) PHAGE_Entero_JSE_NC_012740(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Salmon_g341c_NC_013059(1) PHAGE_Phage_Gifsy_2_NC_010393(1) PHAGE_Citrob_Miller_NC_025414(1) PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1) PHAGE_Xantho_OP2_NC_007710(1) PHAGE_Entero_RB43_NC_007023(1) PHAGE_Entero_Phi1_NC_009821(1) PHAGE_Citrob_vB_CfrM_CfP1_NC_031057(1) PHAGE_Phage_Gifsy_1_NC_010392(1) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1) PHAGE_Edward_eiAU_183_NC_023555(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Salmon_SPN3UB_NC_019545(1) PHAGE_Entero_HK225_NC_019717(1) PHAGE_Shigel_POCJ13_NC_025434(1) PHAGE_Shigel_Stx_NC_029120(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 20% |
| GC % | 47.01% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|MEBR01000087.1| Klebsiella pneumoniae strain CMC_VB6753 plasmid pIncFIB 88735, gc%: 43.43%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 10 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(794..1276) | PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; BGP86_19230; phage(gi966201466) | 2.02e-07 | Showinfo_outline |
| 2 | complement(1614..1829) | PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; BGP86_19235; phage(gi410491522) | 7.34e-18 | Showinfo_outline |
| 3 | complement(2528..2914) | PHAGE_Salmon_SPN3UB_NC_019545: putative Eaa protein; BGP86_19240; phage(gi423262432) | 1.10e-22 | Showinfo_outline |
| 4 | complement(3331..3975) | PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; BGP86_19245; phage(gi514051014) | 9.94e-07 | Showinfo_outline |
| 5 | complement(4862..5359) | PHAGE_Escher_Av_05_NC_025830: hypothetical protein; BGP86_19250; phage(gi730985103) | 9.42e-37 | Showinfo_outline |
| 6 | complement(5453..5671) | PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; BGP86_19255; phage(gi514051015) | 8.75e-28 | Showinfo_outline |
| 7 | complement(5837..6088) | PHAGE_Entero_mEp460_NC_019716: hypothetical protein; BGP86_19260; phage(gi428782346) | 8.97e-33 | Showinfo_outline |
| 8 | complement(6209..6523) | hypothetical protein; BGP86_19265 | 0.0 | Showinfo_outline |
| 9 | complement(6604..6924) | PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; BGP86_19270; phage(gi410491515) | 7.00e-36 | Showinfo_outline |
| 10 | complement(6978..7847) | PHAGE_Marino_P12026_NC_018269: putative DNA modification methylase; BGP86_19275; phage(gi399528347) | 2.15e-14 | Showinfo_outline |
Sequence
>complement(794..1276)
KlebsiellapneumoniaeMNNSFECSKRTDITEQPQSHDLLIANGNETANLLRHLANNEIDSDYFAVVSECESYGQETDAELSITEFALRAAGYVDALVESLEKALQRIAELDKDCRVYENNVKNLLERAGSAESSCAEAARILQSGERMALTRAITILQGPGISHCDGGIKPDEVNL
Sequence
>complement(1614..1829)
KlebsiellapneumoniaeMPELLNHWTVDEVAECLDGVGQELYRKLWSYIEATTDGEAPLAKVAWGDLTREHKVELVHAIQQEFPDDDI
Sequence
>complement(2528..2914)
KlebsiellapneumoniaeMSRDENIQAVFDLKVGYTLGLADIEILKRVARMALTAMDGEPVVFTDERNLHHIAMGRETSLIWGKQNSETGDIPLYRHAKLVPDALIQAVAFYEQVKRENPPVETGAYKDAVERVLREACRAVIKDE
Sequence
>complement(3331..3975)
KlebsiellapneumoniaeMTTETLSREWLQHQISAIEGAGITDSNTLAAFKLALAAMSSKPVVADEVEHVAAVLELIGSFEATDIDSDTVDLRFEIADIDTGSDVSITEYAARGSAIIRMLTCISSELPDGYVREALKNTQTENELARGQLFIAQRTLLNQQRKIAELESRTVQLPKPKDSDPGWKIDPEFISKVQNAIGYDDQCECWEGTPSMEVVEAVLLAAAGIKMEVE
Sequence
>complement(4862..5359)
KlebsiellapneumoniaeMKFSRFFELITAIWANKINQRRDPEVTIIIHSPGSVGVTPSVEVESIEAGFDWSAGQVLIYPAQPLTTLTPDQVADITTSVRKGQSWHAYEAYKKHKAEMATAATEYLKVAGQRDELLIALEALSAACDTGERDRDGKQSGVVIPDKHAVWAAREAIARVKGGIV
Sequence
>complement(5453..5671)
KlebsiellapneumoniaeMATHIRNFGWNRVKLSTLTYDQLEQLKKKVEEEHACNNGIFLYDKAGLKKLDALSWAVYHKMKADKKSGQVS
Sequence
>complement(5837..6088)
KlebsiellapneumoniaeMFNQTEKSIAQIAEYIPRACRDMKLKEAKARLATKIALYITDGSDAEVLNATFARALNSHTREAFFSNVSASIDYKDPSLQSK
Sequence
>complement(6209..6523)
KlebsiellapneumoniaeMGIENGNSSVQQDVPATDNDVRHEVIVTGCVTKYGRGIHFCNDELLSGANHNLWFPLSSEEDWFSGIERVLMMNGLAENVVKLSPLNDGKDYHDWKVTYNRRNV
Sequence
>complement(6604..6924)
KlebsiellapneumoniaeMAIEIKERYTTAVISTAHISKDDAVLLTEASYNPRSESGRNWIHANEYGYIIRITCDNQEWKQHLRDDGISWPTIENIEKVLNAGFECVHFDRDADIVDELIAWDW
Sequence
>complement(6978..7847)
KlebsiellapneumoniaeMSIENTLIDELNTSENTGDIIPSVPIDLIIAQRTAGIAAFMEGLEKLREAELLFAAAAEKDWFSGLDEIVASGRRCRKENEIEALRRRVARCVDSSIWTRLMTQTGMFTFMSSEQHDKWTDQVYSEECPEVTLDNVISTFQHLHASKNETFVTGIIDVFRKLSWDYKTNNPCRLGKKIILEGVLSINISRNRYASVRTNAQNWINDLARAFCLIDNKNVPDSRIAEGSQYRDFINLNSYTLNGVFTCEWFTIKSFWKGSAHVTFTRPDLVDKINEIVASRYPDALPSRV
Region 2, total 10 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 29689..30891 | PHAGE_Burkho_KL3_NC_015266: gp45; BGP86_19390; phage(gi327198090) | 6.66e-41 | Showinfo_outline |
| 2 | complement(30981..32396) | PHAGE_Burkho_KL3_NC_015266: gp47; BGP86_19395; phage(gi327198092) | 4.80e-130 | Showinfo_outline |
| 3 | complement(32523..33266) | PHAGE_Shigel_Stx_NC_029120: DNA replication protein; BGP86_19400; phage(gi985761263) | 2.44e-82 | Showinfo_outline |
| 4 | complement(33263..33697) | hypothetical protein; BGP86_19405 | 0.0 | Showinfo_outline |
| 5 | complement(33730..33990) | PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; BGP86_19410; phage(gi971749619) | 1.11e-14 | Showinfo_outline |
| 6 | complement(34244..34687) | hypothetical protein; BGP86_19415 | 0.0 | Showinfo_outline |
| 7 | 34918..35277 | hypothetical protein; BGP86_19420 | 0.0 | Showinfo_outline |
| 8 | complement(35462..35872) | PHAGE_Entero_P1_NC_005856: Lxr; BGP86_19425; phage(gi46401722) | 6.20e-54 | Showinfo_outline |
| 9 | 35997..36311 | hypothetical protein; BGP86_19430 | 0.0 | Showinfo_outline |
| 10 | complement(36302..36880) | PHAGE_Edward_eiAU_183_NC_023555: DNA repair ATPase; BGP86_19435; phage(gi589889282) | 1.58e-53 | Showinfo_outline |
Sequence
>29689..30891
KlebsiellapneumoniaeMSLLAEWLQTKCSANVWVYVKRLSANDTGATRSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLDDVRAIYYNNKFFGGTRDEKRLTGFGRQNPLQNPENTGALALLAFDHVPGTSSSYCDVWVCKDLTEEDILEPIIGEVIPGATIFGPGDKIIGGFVTETSPGRTKYKLPPEWTHHFPSGREIISFAACHYDRTADDPDSQLTRRRKIEFEIFLAVEELHVLGQIAEGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFKEHGATSFETQAITEGKKKPDFIFPSGAAYHDPDYPAERLRMLGVKTTCKDRWRQVLNEADRIDTVHLFTVQQGVSVAQFREMQSEGIRLVVPVGLHKAFPEEIRGELMSLSAFIDEIKKLYW
Sequence
>complement(30981..32396)
KlebsiellapneumoniaeMSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKARK
Sequence
>complement(32523..33266)
KlebsiellapneumoniaeMSPVKNGDIMKRLRKMMPKTVEPAFNSPEELLQWQREQGQLRSEALERENRAMKMQRTFNRSGIRPLHQNCSFDNYLVECEGQMKALMLARQYVEEFEGNIASFIFSGKPGTGKNHLAAAICNDLLLRGKSVLIITVADIMSSMKDTFGNRNTSEEQLLNDLSKVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLVGERVMDRMRLGNSLWVVFNWESYRHRVSGKEY
Sequence
>complement(33263..33697)
KlebsiellapneumoniaeMTQQFSPPHEVVEMSRRIFENLISSTLKTSDTTGTCMYGSILVSMLLEKFSGVRTRIAGGDGVGDGGIVTPEGMKGHYWVVANVHGMHFIVDITADQFGMDSIIYKGLREAPEYVEGHQAVVDEHVADSFQKLFQSYSSEDTRL
Sequence
>complement(33730..33990)
KlebsiellapneumoniaeMKSTNENENRRGLLISAGQLLFGERWQTELARALGLSDGRRIRQWLSGDRPIPVGIWDDLRELLEDRSSKMELIVKQIQASKKDKM
Sequence
>complement(34244..34687)
KlebsiellapneumoniaeMSTIPQLAKLGFSSDVVPVINTPAPNMTRGFERFHISYNSSSAGYGCDTTALVLDGRVFFVLNGDHACDMTKAAAARGIDGCIDVFIDRIESASRHSEHKMAIGLTNDEFGLMPTALAVIGEENILRLLSAVTGNVQDFSAYGINQD
Sequence
>34918..35277
KlebsiellapneumoniaeMFNSLSDYLQQQRDRDEALKRKLSQLKPTVRNGEAGEIIAALIDLGSVGGDFKKTTYDYIYEYFASARCIDVLVVMLFLNMKHPLSDGAIKKAYARQSDSEDSRSAYISLIVDTIDKRR
Sequence
>complement(35462..35872)
KlebsiellapneumoniaeMPSQLPLDPKLPANFDDTPNSERSKEQLDEWWDHPYGITEPDGSFTDRCLNGGARDRSSVLGKVRTYEEACVLAHDAQAKWVNTRLKPIFMYSNEPPFRLVVQSQRPDYEESIIGEFNTIDEINLFLLKQHPTRTT
Sequence
>35997..36311
KlebsiellapneumoniaeMQKKMLTVLICATVFLSGCKEEGITPTGKACMGTDNDSLIEGLKGKCQKGDTIATKNPAYFCDFKSQIAFNNYNSAICIYTGMQAEERIKEADISPRKDSKPQS
Sequence
>complement(36302..36880)
KlebsiellapneumoniaeMSEKIIKRGGELIELPSHNNNAVKTEMQTRTEKPKTKITKAQREELRLKFACRCAYCGCELKEKGWHADHVEPVRRDFDIVRAPQGSRVSHVARSNGRVFHPDRHDLDNLFPACSACNLFKATYSIEGFREQIAHQPERAQAYSVNFRTAQRFGLVTVIEKPVVFWFEAYDASKELEPQLSYFLAHREAYQD
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 88735 bps
Phages: 2
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: BGP86_19230 (Region 1)
Locus: BGP86_19230ORF Start: 794
ORF Stop: 1276
Strand: Backward
Protein Sequence: MNNSFECSKRTDITEQPQSHDLLIANGNETANLLRHLANNEIDSDYFAVVSECESYGQETDAELSITEFALRAAGYVDALVESLEKALQRIAELDKDCRVYENNVKNLLERAGSAESSCAEAARILQSGERMALTRAITILQGPGISHCDGGIKPDEVNL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19230, hypothetical protein, phage(gi966201466), PHAGE_Salmon_SEN34_NC_028699
Homolog/Ortholog E-Value: 2.02e-07
Locus 2: BGP86_19235 (Region 1)
Locus: BGP86_19235ORF Start: 1614
ORF Stop: 1829
Strand: Backward
Protein Sequence: MPELLNHWTVDEVAECLDGVGQELYRKLWSYIEATTDGEAPLAKVAWGDLTREHKVELVHAIQQEFPDDDI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19235, hypothetical protein, phage(gi410491522), PHAGE_Salmon_SSU5_NC_018843
Homolog/Ortholog E-Value: 7.34e-18
Locus 3: BGP86_19240 (Region 1)
Locus: BGP86_19240ORF Start: 2528
ORF Stop: 2914
Strand: Backward
Protein Sequence: MSRDENIQAVFDLKVGYTLGLADIEILKRVARMALTAMDGEPVVFTDERNLHHIAMGRETSLIWGKQNSETGDIPLYRHAKLVPDALIQAVAFYEQVKRENPPVETGAYKDAVERVLREACRAVIKDE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19240, putative Eaa protein, phage(gi423262432), PHAGE_Salmon_SPN3UB_NC_019545
Homolog/Ortholog E-Value: 1.10e-22
Locus 4: BGP86_19245 (Region 1)
Locus: BGP86_19245ORF Start: 3331
ORF Stop: 3975
Strand: Backward
Protein Sequence: MTTETLSREWLQHQISAIEGAGITDSNTLAAFKLALAAMSSKPVVADEVEHVAAVLELIGSFEATDIDSDTVDLRFEIADIDTGSDVSITEYAARGSAIIRMLTCISSELPDGYVREALKNTQTENELARGQLFIAQRTLLNQQRKIAELESRTVQLPKPKDSDPGWKIDPEFISKVQNAIGYDDQCECWEGTPSMEVVEAVLLAAAGIKMEVE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19245, hypothetical protein, phage(gi514051014), PHAGE_Vibrio_pYD38_A_NC_021534
Homolog/Ortholog E-Value: 9.94e-07
Locus 5: BGP86_19250 (Region 1)
Locus: BGP86_19250ORF Start: 4862
ORF Stop: 5359
Strand: Backward
Protein Sequence: MKFSRFFELITAIWANKINQRRDPEVTIIIHSPGSVGVTPSVEVESIEAGFDWSAGQVLIYPAQPLTTLTPDQVADITTSVRKGQSWHAYEAYKKHKAEMATAATEYLKVAGQRDELLIALEALSAACDTGERDRDGKQSGVVIPDKHAVWAAREAIARVKGGIV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19250, hypothetical protein, phage(gi730985103), PHAGE_Escher_Av_05_NC_025830
Homolog/Ortholog E-Value: 9.42e-37
Locus 6: BGP86_19255 (Region 1)
Locus: BGP86_19255ORF Start: 5453
ORF Stop: 5671
Strand: Backward
Protein Sequence: MATHIRNFGWNRVKLSTLTYDQLEQLKKKVEEEHACNNGIFLYDKAGLKKLDALSWAVYHKMKADKKSGQVS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19255, hypothetical protein, phage(gi514051015), PHAGE_Vibrio_pYD38_A_NC_021534
Homolog/Ortholog E-Value: 8.75e-28
Locus 7: BGP86_19260 (Region 1)
Locus: BGP86_19260ORF Start: 5837
ORF Stop: 6088
Strand: Backward
Protein Sequence: MFNQTEKSIAQIAEYIPRACRDMKLKEAKARLATKIALYITDGSDAEVLNATFARALNSHTREAFFSNVSASIDYKDPSLQSK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19260, hypothetical protein, phage(gi428782346), PHAGE_Entero_mEp460_NC_019716
Homolog/Ortholog E-Value: 8.97e-33
Locus 8: BGP86_19265 (Region 1)
Locus: BGP86_19265ORF Start: 6209
ORF Stop: 6523
Strand: Backward
Protein Sequence: MGIENGNSSVQQDVPATDNDVRHEVIVTGCVTKYGRGIHFCNDELLSGANHNLWFPLSSEEDWFSGIERVLMMNGLAENVVKLSPLNDGKDYHDWKVTYNRRNV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19265, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: BGP86_19270 (Region 1)
Locus: BGP86_19270ORF Start: 6604
ORF Stop: 6924
Strand: Backward
Protein Sequence: MAIEIKERYTTAVISTAHISKDDAVLLTEASYNPRSESGRNWIHANEYGYIIRITCDNQEWKQHLRDDGISWPTIENIEKVLNAGFECVHFDRDADIVDELIAWDW
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19270, hypothetical protein, phage(gi410491515), PHAGE_Salmon_SSU5_NC_018843
Homolog/Ortholog E-Value: 7.00e-36
Locus 10: BGP86_19275 (Region 1)
Locus: BGP86_19275ORF Start: 6978
ORF Stop: 7847
Strand: Backward
Protein Sequence: MSIENTLIDELNTSENTGDIIPSVPIDLIIAQRTAGIAAFMEGLEKLREAELLFAAAAEKDWFSGLDEIVASGRRCRKENEIEALRRRVARCVDSSIWTRLMTQTGMFTFMSSEQHDKWTDQVYSEECPEVTLDNVISTFQHLHASKNETFVTGIIDVFRKLSWDYKTNNPCRLGKKIILEGVLSINISRNRYASVRTNAQNWINDLARAFCLIDNKNVPDSRIAEGSQYRDFINLNSYTLNGVFTCEWFTIKSFWKGSAHVTFTRPDLVDKINEIVASRYPDALPSRV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19275, putative DNA modification methylase, phage(gi399528347), PHAGE_Marino_P12026_NC_018269
Homolog/Ortholog E-Value: 2.15e-14
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Click on a sequence to see details.
Locus 1: BGP86_19390 (Region 2)
Locus: BGP86_19390ORF Start: 29689
ORF Stop: 30891
Strand: Forward
Protein Sequence: MSLLAEWLQTKCSANVWVYVKRLSANDTGATRSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLDDVRAIYYNNKFFGGTRDEKRLTGFGRQNPLQNPENTGALALLAFDHVPGTSSSYCDVWVCKDLTEEDILEPIIGEVIPGATIFGPGDKIIGGFVTETSPGRTKYKLPPEWTHHFPSGREIISFAACHYDRTADDPDSQLTRRRKIEFEIFLAVEELHVLGQIAEGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFKEHGATSFETQAITEGKKKPDFIFPSGAAYHDPDYPAERLRMLGVKTTCKDRWRQVLNEADRIDTVHLFTVQQGVSVAQFREMQSEGIRLVVPVGLHKAFPEEIRGELMSLSAFIDEIKKLYW
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19390, gp45, phage(gi327198090), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 6.66e-41
Locus 2: BGP86_19395 (Region 2)
Locus: BGP86_19395ORF Start: 30981
ORF Stop: 32396
Strand: Backward
Protein Sequence: MSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKARK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19395, gp47, phage(gi327198092), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 4.80e-130
Locus 3: BGP86_19400 (Region 2)
Locus: BGP86_19400ORF Start: 32523
ORF Stop: 33266
Strand: Backward
Protein Sequence: MSPVKNGDIMKRLRKMMPKTVEPAFNSPEELLQWQREQGQLRSEALERENRAMKMQRTFNRSGIRPLHQNCSFDNYLVECEGQMKALMLARQYVEEFEGNIASFIFSGKPGTGKNHLAAAICNDLLLRGKSVLIITVADIMSSMKDTFGNRNTSEEQLLNDLSKVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLVGERVMDRMRLGNSLWVVFNWESYRHRVSGKEY
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19400, DNA replication protein, phage(gi985761263), PHAGE_Shigel_Stx_NC_029120
Homolog/Ortholog E-Value: 2.44e-82
Locus 4: BGP86_19405 (Region 2)
Locus: BGP86_19405ORF Start: 33263
ORF Stop: 33697
Strand: Backward
Protein Sequence: MTQQFSPPHEVVEMSRRIFENLISSTLKTSDTTGTCMYGSILVSMLLEKFSGVRTRIAGGDGVGDGGIVTPEGMKGHYWVVANVHGMHFIVDITADQFGMDSIIYKGLREAPEYVEGHQAVVDEHVADSFQKLFQSYSSEDTRL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19405, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: BGP86_19410 (Region 2)
Locus: BGP86_19410ORF Start: 33730
ORF Stop: 33990
Strand: Backward
Protein Sequence: MKSTNENENRRGLLISAGQLLFGERWQTELARALGLSDGRRIRQWLSGDRPIPVGIWDDLRELLEDRSSKMELIVKQIQASKKDKM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19410, hypothetical protein, phage(gi971749619), PHAGE_Mannhe_vB_MhS_535AP2_NC_028853
Homolog/Ortholog E-Value: 1.11e-14
Locus 6: BGP86_19415 (Region 2)
Locus: BGP86_19415ORF Start: 34244
ORF Stop: 34687
Strand: Backward
Protein Sequence: MSTIPQLAKLGFSSDVVPVINTPAPNMTRGFERFHISYNSSSAGYGCDTTALVLDGRVFFVLNGDHACDMTKAAAARGIDGCIDVFIDRIESASRHSEHKMAIGLTNDEFGLMPTALAVIGEENILRLLSAVTGNVQDFSAYGINQD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19415, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: BGP86_19420 (Region 2)
Locus: BGP86_19420ORF Start: 34918
ORF Stop: 35277
Strand: Forward
Protein Sequence: MFNSLSDYLQQQRDRDEALKRKLSQLKPTVRNGEAGEIIAALIDLGSVGGDFKKTTYDYIYEYFASARCIDVLVVMLFLNMKHPLSDGAIKKAYARQSDSEDSRSAYISLIVDTIDKRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19420, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: BGP86_19425 (Region 2)
Locus: BGP86_19425ORF Start: 35462
ORF Stop: 35872
Strand: Backward
Protein Sequence: MPSQLPLDPKLPANFDDTPNSERSKEQLDEWWDHPYGITEPDGSFTDRCLNGGARDRSSVLGKVRTYEEACVLAHDAQAKWVNTRLKPIFMYSNEPPFRLVVQSQRPDYEESIIGEFNTIDEINLFLLKQHPTRTT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19425, Lxr, phage(gi46401722), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 6.20e-54
Locus 9: BGP86_19430 (Region 2)
Locus: BGP86_19430ORF Start: 35997
ORF Stop: 36311
Strand: Forward
Protein Sequence: MQKKMLTVLICATVFLSGCKEEGITPTGKACMGTDNDSLIEGLKGKCQKGDTIATKNPAYFCDFKSQIAFNNYNSAICIYTGMQAEERIKEADISPRKDSKPQS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BGP86_19430, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 10: BGP86_19435 (Region 2)
Locus: BGP86_19435ORF Start: 36302
ORF Stop: 36880
Strand: Backward
Protein Sequence: MSEKIIKRGGELIELPSHNNNAVKTEMQTRTEKPKTKITKAQREELRLKFACRCAYCGCELKEKGWHADHVEPVRRDFDIVRAPQGSRVSHVARSNGRVFHPDRHDLDNLFPACSACNLFKATYSIEGFREQIAHQPERAQAYSVNFRTAQRFGLVTVIEKPVVFWFEAYDASKELEPQLSYFLAHREAYQD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BGP86_19435, DNA repair ATPase, phage(gi589889282), PHAGE_Edward_eiAU_183_NC_023555
Homolog/Ortholog E-Value: 1.58e-53
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download