Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1176942320 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1176942320.PHASTER.zip
gi|00000000|ref|MUMQ01000111.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_12 40163, gc%: 55.45%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 0 regions are incomplete, and 1 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 16.7Kb | questionable | 80 | 13 | 23285-39992 info_outline | PHAGE_Salmon_SJ46_NC_031129(3) | 57.42% | Show info_outline |
>1 23285-39992 CAGGGCGAGAGCGTGAACATATTGTTAAAATTCACCCAATTTGTTGAGGCCAGCATTGAGGGGTTCTAAG CGGGAATCCCAGAAAATTCCGTCATTCCGTATGATGAAAATTCAGTCGACTCCTCGCTTGACGTGACGAG CGCCAAAAGCCTGCCGCATCTGCCTGGCGCGCTCGAGCTCATCGCCATGCAAATACATCGACGTCGTGGC GATCGACGCATGGCGTAGGTTGTCGCGCACCGCGGTGAGCTGAGCTCCCCGGGCCAACGCATGGCTGGCA TGACTGTGACGCATCCAATGAGGCGTGGCACGGCGCAGCTTTTCGGCGGCGACCGGATGATCGGCCTCAA TGGCCTCAGCGGCTTGCGTAAAGAATCTTCGCAACACGCACCAAAGGTGAGGGCCGGTGATGCCGGCATT ACCGTCTTCCCCAAGACTGCCCACCAGGGGCGTTTTCGGATTCCACCGTTCCCGGCTGACTGGCAGTTGA CGCTGTGCCAAGTATTGGTCCAGCGCCGTATACGCGAGCGGCGGCAAGGCCACCTTACCTGGTTTGCCAC CTTTGCCAACCAAATGCAGCCAGTGGTCACCGTGCTCGTCGAGGCGGACATTACCCAGGACGGCGCCGAC CAGTTCGCTAGCGCGCAGGCCCGTGGCATAGCCGAAGTCGAGCATGAAGCGCAGGCGTTGTGCTGCCGGC TCGGACCAGCCGTAGGACCATTCCAGGCCGTCTGCAATGGCGCGCAGCAGTAGCCATTCTCCCTCGGTAA AGCCTCGCGCCGTATCCAGTGCGGGCCGCAAGGCGTGACCGCGTACCTTGACGCCGGCGAAAGGGTTGGC CAGCACATAGCGCTGCTCGATGAGCCACCGGAACAGCGCCGAGAGCACCGTCAGCGCATACGCTGCCGAG CGTGCGGACAAGCCGCCCGAGAAGGGGCGCCATTCCACCGAATCGCGTGGTCGAGGTGGCCCCACCCAAC GCTCGCGCGGGGTCGGGTGCCGGACAAAGGCCCGGTACGCGATTGCATCGTCCGTGGTCAGGGATGATAG CGCCCGTCCGCGTTCGACGATGGCCCACAGGATTAGCCGCGCAGCCTCCTTGCGATAGGCGCGCTGTGTG GCGACAGTCTCGTGCAGCGCCAGCCAGGCCTGCACGGCCTCGTAGTCGTTGGTCGCATTCAGCGTGCAAG CGTTGCGCGGGGCCCGGAAATTGCCCTGCGAGCCGTCGACTTCGTTCGGCAGACGCAACTGCTCCCACGG CACGATGCCGCTGGGCTGAATAATCGGGATCAGGGCCCGGGCGCGCTCGGTGAGCTGCGGATGTGCGGCA AAGAAAGCCTCGACCTGCCGGGCGCCTGTCATGCCGAGTCCCTCGATGGCTTTCCACCAGCCACGCCGGC GGGGAATGCGCACGGTCAGCGCCGAGAGGGTGTGGATACCGTACGCCTGCAGTGCCCTGACGGTCCTCGG AGACAGCCACTGGTCGATGCTGTCGCTGATCTGGGGCTTCGGCGCCGGCAGCGTGGGCAAGAGCCGGATC GCGCGTTCGACGGCACCCGCGCGCCCCTGTCGCTCTTCGGGGGCGTGCTGGAACACGTCGGCCAGATCCG GCCGGTGGCGGCTGTTGGCGAAAACGATGAGCTGGCGGCGGATATGCCCCAGCATCCCTCGCGCTGATTG ACCGGCGGCCTTGCGTGCCGCCAGGTAGTGTTCAACGGCCGCGCGAGAGCTGAGTCCCGCGTACCAGCCG CGCAAGGCAGCCAGCGAATCCGCATCGGGAAAGCCGACTGGGGTAGAACTCGAAGCCGTAGTCTGGCCCG TTTTCATATGGACAGGTTGCGATTCGAAAAGCGAGTAACGCGATAATAACGATTATTTCAGTAGAATCGA AAATGCCCCATGTTTCTACGAAACCTCAAGATAGCAAGAACGGGCCATGAGCAAGAAGAACAAGCTACTC AGCGTCCTATCCGACGCCGAACAGGAGGCCTTGTATGGCCTGCCGGAGTTCGATGATGCGCAGCAGCTGG AATATCTGGCTGTGACAGAAACCGAGTTGGCGCTTGCCAACAGCCGGCCCAGTCTTCATGCCAAGGTCTA TTGCCTCTTGCAGATCGGCTACTTCAAGGCCAAGCATGCCTTCTTCAGTTTCGACTGGGACGAAGTCGAG GACGATTGCGCTTTCGTGCTGAGCCGCTATTTCCACGGCGAGGTGTTCGAACCCAAGGCGATCACCAAGC ATGAACGCTACACCCAGCGCGAGCAGATCGCCAAACTATTCGGCTACTGGCCGTGGTCGGCCGCCTTCCT GCCGCAGCTCGAGCAGCAGGCCGCACGGACCGTGCGGCGTGACGTAACGCCGGGGTTCGTCGCCGCCGAG CTGATCGTCTGGCTCAATGAGCACAAGATTATCCGGCCCGGCTATACGACCTTGCAAGAGTTGGTCAGCG AAACGCTATCCGCCGAGCGCCGGCGCCTGGGCAATCTGCTGGAGCAAGCGTTGGACGAATCTGCCAAGGC CGCGCTGAGCCAGCTTCTGGTCCGTGATGACACCCTGTCGCAACTGGCGGCGCTCAAGCAGGACGCCAAG AATTTCGGCTGGCGCCAGATGGTCCGCGAGCGCGAAAAGCGCGCCACGCTGGAGCCGCTGCACGCAATCG CCAAGACACTGCTGCCTAAACTCGACGTCTCGCAGCAGAACCTGCTGTACTACGCGAGCCTGGCAAACTT CTACACCGTCCACGACCTGCGCAATCTGAAGGCCGATCAGACCCAACTCTACCTGCTGTGCTATGCCTGG GTACGCTACCGGCAGCTCTCCGACAACCTGGTCGATGCGATGGCGTACCACATGAAGCAGTTGGAGGACG AAAGCAGCGCTGGTGCCAAACAATCCTTTGCCGACGAGCAGGTGCGCCGTCAGCAGGAAACGCCGCGGGT AGGCCGCCTGCTGTCACTCTACGTTGATGATAGCGTGGCCGATCCCACGCCCTTCGGCGAGGTGCGGCAG CGCGCCTACAAGATCATGCCTCGCGATACGCTGCAAACCACGGCGCAGCGTATGAGCGTGAAGCCGGCGA GCAAGCTGGCCTTGCAGTGGCAGGCGGTGGACGGGCTGGCCGACCGCATGCGCCGCCATCTTCGTCCACT GTACGTTGCGCTCGACCTCTCCGGCTCCAATCCAGACAGTCCATGGCTTGCCGCGCTGGCCTGGGCCAAA GGTGTTTTTGCCAAGCAGCAGCGGCTGTCGCAACGGCCACTCGACGAGTGGCCCGCGGCGACACTTCCGA AACGCTTGCGGCCGTACCTGCTGACCTTCGACGCCGACGGTAAACCAACCGGCCTGCACGCTGACCGCTA CGAGTTCTGGCTGTACCGCCAGATCAGGAAGCGTCTCCAATCGGGTGAACTCTACCTCGACGACAGCCTG CAACACCGGCACTTCTCAGATGAACTGGTTGAGATGGACAGGAAGATCGATGTGCTCGCAAAAATGGAGA TCCCCTTCCTGCAGCAACCCGTCCATGCCCAACTCGATGCGCTGACTGCCGAACTGCGCACGCAGTGGCT GGCGTTCAACCGCGAGCTGAAACAGGGCAAGCTGACGCACCTCGAATACAACAAGGACACGCAGAAACTG ACCTGGCGCAAGCCCAAGAGCGAGAATGAGAAAGCGCGCGAAAAGGCATTCTACGAGAAGCTTCCGTTCT GCGACGTGGCCGACGTGTTTCGCTTCGTCAACGACGAGTGCAAGTTTCTGTCGGCGTTCACGCCCATGCA GCCGCGCTACGCGAAGAAGGTCGCCGACGCTGACAGCCTGATGGCGGTCATCATCGCGCAAGCGATGAAC CACGGCAACCACGTCATGGCGCGCACCAGCGACATCCCGTACCACGTGCTGGATAGCGGCTACCAGCAGT ACCTGCGCCAGGCAACGCTGCACGCGGCCAACGACTGCATCAGCAACGCCATCGCCACGCTACCGATCTT CCCATACTACTCGTTCGACCTCGAAACGCTGTACGGTGCCGTCGACGGGCAGAAATTCAGCGTCGAACGG CCGACCGTGAAGGCGCGCTATTCGCGCAAGTACTTCGGGCGCGGCAAGGGCGTGGTCGCCTACACGCTGC TGTGCAACCACATCCCGCTCAACGGCTACCTGATCGGCGCGCACGACTACGAGGCCCACCACGTGTTCGA CATCTGGTATCGCAACACGTCGGACATCATGCCGACCGCGATCACCGGCGACATGCACAGCGTCAACAAG GCCAACTTCGCCATCCTGCATTGGTTTGGCCGGCGGTTCGAGCCGCGCTTCACCGACCTCAACGCGCAAT TGAAAGAACTCTACTGCGCTGACGATCCAGCACAGTATCAGGCGTGCCTGATTCGGCCAGTCGGGAAAAT CGACTGCGATCTCATCCATCGCGAGAAGCCGAACATCGACCGGATCGTCGCCACACTCGGGCTGAAGGAA ATGACGCAGGGCACGCTGATCCGCAAGCTGTGCACCTACACCACGACGAACCCGACGCGGCGCGCGATCT TCGAGTTCGACAAGCTCATCCGCAGCATCTACACGCTTCGCTACCTGCGCGATCCGCAACTGGAACGCAA CGTGCACCGCTCGCAAAATCGCCTCGAGTCCTACCATCAGCTACGCTCGGCCATTGCCCAGGTCGGCGGT AAGAAGGAACTGACCGGTCGCACCGACATTGAAATCGAGATCAGCAACCAGTGCGCACGGCTGATCGCCA ACACGATCATTTTCTACAACTCGGCAATCTTGTCGCGGCTGGTGACCAAGTACGAGGCGGCCGGCAACAG CAAGGCGCTGGCACTCATCACAAAAATTTCGCCTGCGGCATGGCGGCACATCCTGCTCAACGGGCACTAC ACCTTTCAAAGCAGCGGCAAGACGATCGATCTCGATGCGATCGTCGCAGGCCTGGAACTGGAGTGACGGA ATTTTCAGCGGTTCCGTGTTAGCAGCAGTGTAAAACTGACCCACCCCAGCGAAGTAAAACTGATCCACCT GGGCTAGTTTGGCGGCCTTTTCGAGGCCGTCGATGTTGACCCAGGAGCAAACCGTGGAAATCAGAGTTCT TGCCCGACAGGGCCACTCCATCCGGCACATCGCCCGCACGTTGGGGGTCTCGCGCAATACCGTGCGCCGC TACCTCCGCGATCCGTCGGTAGCGCGATACCAGCCCCGTGAACCACGCCCCACCAAACTGGGGCCATTTG AATCTTATCTGCGGCAACGGGTCGAGCAGGCCCACCCCATCTGGCTGCCTGCCACCGTCCTGAATCGGGA AATCCGCGCTCAAGGGTATGGCGGCGGTCTCTCGTTATTGCGCGCCTTCCTCGCCACGCTCAAGCCCGCC CGCCGCGAAGCAGGTCCGGCCGTCCGTTTCGAGACCGAGCCCGGACGGCAGTTGCAGGCTGATTTCGTGG TCTTGCGCCGGGCCAGATCCCCCATGTCGGCCTTCGTCGCCACGCTGGGATACAGCCGCATGACGTTTGT CACCTTCGTACCGGACGAATCCTTCGAGTCCGTGCGGGACTCCCTGTTGCTGGCTTTTGACTATCTGGGC GGTGTGCCCCGCGAGGTGTTGTTCGACAACATGAAGACCGTGGTGCTGGAACGCGATGCCTACGGTGACG GCAAGCACCGTTTTCACCCCGGCTTGCTTCAACTGGCCGATGACCTGGGGTTCCGGATCCGGCTGTGTCG CCCGTATCGGGCCCAGACCAAAGGCAAGGTCGAGCGCTTCAATCGCTACTTCCGCGAGAGCTTCTACAAC CCGTTGCTGACCCGGATGAAGGGCACGGGGCTGCTGCTCGATTGTGCTGCTGCCAACCGACGCGTCCGTG ACTGGTTGGCAGACGAGGCGAATGTGCGGGTCCACGCCACCCTGAACGAGCGCCCCATCGACCGTTGGCG GCAGGAGCGGGAACACCTGCAACCCTTGCCATCCCGTGTGCGGCGCGACGAGGCCCCCCTGCTGGATAAC AGTCTCCGCCCGGTACCACTGGAATCTCTCCAGCACCCACTGTCTGTCTATGACGCAATTGGGGAGGCCT GCCGATGAACCTCCAGCATGAGCGGATCGACGCCCTGTGCCAGCAACTCAAACTCGAACGGGTGGCAACG CATTACCCCGTCCTGGCGCAGCAGGCGGTGCGCGAGGACTTCAGCTTCACCGACTTCCTGGAACACCTGT TGCGGCATGAAGCGGGGTGTCGCCAGCAGCGCAGCCGCGAACTGCTGACGCGGATGGCTTGCTTCCCGGG CATCAAGACCCTGGAGGACTATGACTTCAGCTTCAACCCCGGCGTGCCCAAGGCACTGGTGCAGGAGCTG GGCAGTCTGGCGTTTGTCGAACGGGCCGAGAACGTGGTGCTGATCGGACCCTCTGGCATCGGCAAGACCC ACCTCGCCATCGCCTTGGGTTACAAGGCCGCGCAAGCCGGGGTCAAGACACGCTTCATCACGGCAGCCGA CCTGATGCTGCAACTGAGCACGGCGCAGCGACAAGGGCGGCTGAAGGAATACTTCAACCGCGCCATCCTC GGTCCACGGCTGCTGGTGATCGATGAGATCGGCTACCTGCCTTTCGGACGCGAGGAAGCGAACCTGTTCT TTCAGGTGGTGGCGAAGCGCTATGAGAAAGGGGCGATGATCCTGACCTCGAACCTGCCGTTCAGCCAGTG GGCCGACGCGTTTGCCGGCGATACCACCCTGACAGCCGCGATGCTGGATCGGCTGCTGCACCATGCCCAT ATCCTGACCCTGAGCGGCGAAAGCTACCGCTTGAAGGACAAGAGGAAGGCGGGAGTGGTCAGGAAAAATT CCAAACCCGAATGATCCAGGTGGGTCAGTATTACTTTGGTGATTCAGGGGTAAAGTGGGTCAGTTTTCAG TTGGTGTTGACACCGGCGTACCCTCGGTGCTATCTTCGCGCCCCAATAGTCGGGGCTTGGCCAGGACTTC CTGAGGCCGTCCGTAACGTGGATGCCGAGGTCAGGCGAGGTGGCCGACCCATGAACGCCGACCTGATTCG TTTTTCAAGCTCGGTGATAATCCCAGCTGTAGCGGCCTGATTACATCCGGCCGCTACACCTAGCTCCACC TTCAAACAAGGAATATCGTTGATGTCACTGTATCGCCGTCTAGTTCTGCTGTCTTGTCTCTCATGGCCGC TGGCTGGCTTTTCTGCCACCGCGCTGACCAACCTCGTCGCGGAACCATTCGCTAAACTCGAACAGGACTT TGGCGGCTCCATCGGTGTGTACGCGATGGATACCGGCTCAGGCGCAACTGTAAGTTACCGCGCTGAGGAG CGCTTCCCACTGTGCAGCTCATTCAAGGGCTTTCTTGCTGCCGCTGTGCTGGCTCGCAGCCAGCAGCAGG CCGGCTTGCTGGACACACCCATCCGTTACGGCAAAAATGCGCTGGTTCCGTGGTCACCCATCTCGGAAAA ATATCTGACAACAGGCATGACGGTGGCGGAGCTGTCCGCGGCCGCCGTGCAATACAGTGATAACGCCGCC GCCAATTTGTTGCTGAAGGAGTTGGGCGGCCCGGCCGGGCTGACGGCCTTCATGCGCTCTATCGGCGATA CCACGTTCCGTCTGGACCGCTGGGAGCTGGAGCTGAACTCCGCCATCCCAGGCGATGCGCGCGATACCTC ATCGCCGCGCGCCGTGACGGAAAGCTTACAAAAACTGACACTGGGCTCTGCACTGGCTGCGCCGCAGCGG CAGCAGTTTGTTGATTGGCTAAAGGGAAACACGACCGGCAACCACCGCATCCGCGCGGCGGTGCCGGCAG ACTGGGCAGTCGGAGACAAAACCGGAACCTGCGGAGTGTATGGCACGGCAAATGACTATGCCGTCGTCTG GCCCACTGGGCGCGCACCTATTGTGTTGGCCGTCTACACCCGGGCGCCTAACAAGGATGACAAGTACAGC GAGGCCGTCATCGCCGCTGCGGCTAGACTCGCGCTCGAGGGATTGGGCGTCAACGGGCAGTAAGGCTCTG AAAATCATCTATTGGCCCACCACCGCCGCCCTTGCGGGCGGCATGGATTACCAACCACTGTCACATTTAG GCTAGGAGTCTGCGCGGCAGAGCCGTGTGACCGGTTTTCTGTAGAGCACTGACGATGGCGGCGGCGCTCT CTGCAATTGGCAAGGCGTCGGCGCCAAGGATACCAATCTTGCGGCGCGCGGCGTGTTATGACGACTGGGG TGCATTTGAGCCGCCCCATTTAACCTTCGCCCTCACAGATACGCCATTCGCCTCAGATTTAGCGCCATGC AGACGAGCTTCCACTCGGCTTGCACCTTGTCCAGGCCCCTCATGCTGAACTGACGCAATCCCATCACCGC CTTGATCCAACCATTCGGAGCCTCCACGATCGACTTGCGCCGGCGGTAAGCTGCATCGCCTTGCTCCGTT TTCAATTTCGCCGCAATCGCCGCCGTATGCGGATGGGTCTTGGCATTGACCTTGGCATCTTCACGTCCCT CGCGGCCGAGGGCAACGATGACATCGCCGTGGTGATCGGCGACCTTTGCCAGAACAGCCTCACTACGGAA TCCCGCATCCGCCAGCGTCTGGGCCGGCATTTCTCCGGTGTTGGCCTGAACTGCTGCCAGCATGCCCAGC AGCGCCTGACTGTCCGCGGCGCAGTTGGTCAACTCCGCCGCCACGATGATCTGGTGCTCGGCATCGACCG CTGTGTACCCGTTGTAGCTCTGCTCGGAGCCACCACCGGCGTGTTTCATGATCCGGCTGTCCGGATCGGT GAAGCTTTCCTGATCACGGTCATCCGGCACACCAAACTCGCGTTTGTACGAGCCACCGCCCTTGTCCGAG CCATCCGGATGGCGAGGCCGGCGGCCATCGTCTTCGCTGCGCCCCCGGGCCTGGTCCGCTTCACGCTGGC GCGCTTCCAGGCGCGCCTTTGCCGCCTGGATCGCCTCCAGGCGCTTCTCGCGGCGAGAAATCTCGGCAGG AATGTCCAGCTCCGGCTCGTTACGCTCCTGGTCGTCGGTAGCCTTGGCGCGATCAAGCAGCGCCTTGATC TCGCAATGCAATTCGTCCTCGGCCGGCTTCATGCGCTTATAGCTCATCGCCTTGTGGCGGCTGGCGTTGG CTTTTACCTTGGTGCCGTCGACCGCGATCGTGCCAAGCTTCACCAGCCCACATTCGCGCGCCAGTTGCAC CACCTGAACGAACAAATTCTCAAGCTCGGTCAGGTGTAGGGCACGGAAGTCACTCAGCGTGCGGTGGGCC GGGAAGTTTCCAGCGGCCAGCACACGCAACGCGACATCCTCGTACAGCTTCCTGGCTAGTTTGCGCGAAG AGAAGACGCCGCTCGCGTAACCATAGATCAGCACTTTGACCATCATCGCCGGATGAAACGGCTGATTGCC CGGACCACCGCCGGCATACCGGGCGTGGAATGCGCTCAAGTCCAGCGTATCGACAGTCTCGCTGATGAAG TAGGCAAGATGCCCTTCAGGTAGCCACTCTCCCAGAGAAGGGGGCAGCAGATAGGATTGGTCGGGTCGGT AAGGAAGGTAACTGGCAGCCATCCCCGTATCGTCCTCGATCTTCCGCCGATTTGGCTTCTGCCGCGCAGG CTCCTAGGCCACCGTAGCTAAACATACGAGAAAAACCGCTTCTTGAGCGCTCTCTGAGACCACCTTGCCG ACAACGCAGAAACGGTTGCGGAAAAATCGGCGTTTCCGGCGTACGCCACCCGACCTGGACGAACTATTGC GGACCTGGAACTGGAGTAGCGGAATTCCCCGGGGTTTCAGCGTCGCGCCACAGCGCCTCAGATAGATGCG GTAGCCTTTGGCGGGTCGTCATGCCGCGGACCACCCCCCCAAAAAATTCCACAATGCGGAATGGCGGAAT TTTCTGGGGTTCCCGCTTACCCCCCCATTGAGTACCTTTTCCAGGTATTCACTGCTCATTCCTGCAATCT TTTGCTTCCGTCTGATGCTCGCTTTGCGTGAAGTTTCAGCCCTGAGCATGTTCAGCCCCATGTGCCGGAT GCACGCAAGGATCTCTGCGGCATCACCGCGATAAATTGGGCAATCGTCCTCGCCCATCGTGACGTCCAGC ACCCAGTGCAGGCTATTTTCGATGGCCCAGTGCCCACGCACCGATCGTGCAAACTCATCCCGCGTCAGTG CTTTGGAACTGATGTAATAACGCTGTTCAATAGTGATTTTTTCCCTTTTTTCAATGCGATAAGAGATGGC CACGCCAATACTGCGCAACTGTTCCCAATGAGGAAACTGGGCGGCTAACTCACCCGCCGCCATGATATGG TACTCACGACCATCGATGCGCCCATGAGCCTTATCAAGAGTCATCGTTGCTGCGCATAATGGGGTAGCCG CCAGCGGGGCCAGGGCTTGCCGGACCGCCTCGAACAACTTGGGCTGGTTGCCTTTGACGGCTAACAAGTA ATCGCCACTTTGCTGGAGGATGGTCTCGGCGATCTCGGTTTGGCACCCCATCGCATCGATGGATACCAGG CAGCCTTTGATGTCGAGCAACGCCAACAAGTCGGGAATGGCGGTGATTTCATTGGACTTGGCGTCGGTTT TTATCTGTCCGAGCACCAGTTTATTAGCGGCGGCATAGGCGCTTACCATGTGAATGGTCGACGTTCGATC TTCACGGTTATAGGAACTGCGCAGGGTTTTGCCATCGATAGCGACCAAGGCGCCTTCGGTGTGCTGGTTG ATGGCTTGAGTCCAACGTACGAACGCGGCCTGAAACGGCTCTGGTTTGATACCGGAGATGATCCTGGCGA TGGTGTCATGGACAGGAATACCATTTTTAAACAGCCCCTTGGATTGAAACCAAGGAAGATGAACCTCACC GAAATCTTCAATATCTTCCCACCCGTCTGCGCCACCTATCACTGCGCAGACGGTGAGAAACAGGACATCG TAGAAAGGATAATAAATCTTGGCATGCTGGCGAGGGTCGGGAATATCATCGAAAAACTGAGCAAAAACAG CATCAATAGACATGAAGGCACTCCTGAAAAAGGAGCATAAGATCACAGCTGGATCGCAGGGTCAAACCTG TTTTTCTTGGTCAAAAAACGTTCGCGATCTTGCCCTGGGGCGTAAATGAGGCGGTGCTGGTGATGCGCAA GGAAGGGCTGGTGCACTGGAAGAAGATATCGGGATATCACCGTCGCTCGCAGGCAGAGACGGCGATGTAT CGGTTCAAGCAGTTGATGACGGGCAAAATCAGTCTGCGAACATACAACGGTCAGGTAGGGGAAGTGATGG CGTATGTTGGTGCAATCAACAAACTGAACCCCCTTGGTCTGCCTGTCAGAAAGCGCCGAGTGTAACGGTC ACTTGGGGCTGGGGCAGTCGTGGCTTGATGGTTGATTTGGGAAACAACGCCATCTACACTCTGAATAATT CGAGTTTCTTGTAGGCCAAAGTCCAATAGTCAGGTAACTTGAAGTGAGATAAGTAAATACTTCTCAGCGA ACGAGTTTTCTTTAAGAGGTAGTAAAATGAACAAAAAAATATTGATACTGACCGCCCTATTAATGTCTCC TGTTGCTGTTTTTGCGGTTGACAAAACCATGCCGATGGGCGATCACCATTCCATGTCTCCAGCTTCTCAA GAGTTGATGTCTGGTATGAAAAGTATGCATAACGACATGATGGCAGGAGTGATGTCCTCTGATCCAGATG TTGCCTTTGCAAAAGGGATGATTGCCCACCATCAAGGTGCCATTCAAATGTCTGAAACGCAGCTTAAATT TGGTAAGGATCCTGAAATGCGAAAGCTGGCAGAAGATATTATCAAAGCCCAGCAACCAGAAATCGACCAG ATGCAAAAATGGGTTAAAAACCATGAAAAGCCATAGTGACGTTTGAGCAAATTGTTGCAAGCAATAGTTT TTCAGTACCGCACCTTCTGGTTATCAACGAGCACGGTTTTTTACACAACTGTCGAAGTAGCGGAAGGTGC GAACTCAGGGCGAGAGCATGAGTTACTGACATGTTAACCAAAAAAATTTAACCACTGTCATCCCAAGGTG CAATTGCATTTTCTGCTCGTATTTTGTACAGGGGTGTGCTGAAAATGCGATCTCAAATTTGTTCAGCATT GGCCGAGCCACCTATCTCATCATGAAAAACAACAAAAAATCAACTCATGCTCTCGCCCTGTGTGCCGGGG TGGATGTCAATGCGTCACCTGCTGAACAGCCAGGCAAACGCCCAGTGAAATGATACCGAACACCACGATA TTTAACAGGATGCATTTCAGTCTGCTGAACGAACGCGAGAATTCTTCCTTTTCTTCTCTGTCTGCCTATT CAATTAACCAGCGCGAATAGGCATCATTGTGTTTCTGGTCCGTCATCCGTCTTCCCTCTTTCAGTTCTGA TTTTTACGCGTTTCCGTGGCAGCGCGCAGTCGCATGATTATTTGGGTTATGAGTGTTCAATAAATTGGTT AAACTGATCTCGTTGACGGATATCCGTTGGTTGTTGACTTATTCATCTCAGGTATTAGCCGTCTAAATAT CTTTCCTTTGTTTTTGCTGTAATTGTAATTTTAATTTTTTATTAAAGAAAAGTTTTAAGGGTATGAAATA AAAGAACAAAGTTAAACCTGCGGATAAAAGGTATATCAACATGACAGGCACTTCCTCATAGAACTGTATT ATATGTTCAGTACCATCAGCTAGGCCCATCAAAGCTTTGTAATATGTCTCTACCTGAAAGAAGTGGATAA AGGGTACCATCAAAAAATATACGAAGAATACATTAAGTAGATAAGTTAAAGTCAAAGCTTGTTCGCCTCC CGGAAACGGAGCGTGCTGCGCAAAGCAGATCAGCCATGCTGTAAATACCAGAAAACATACCGCGAGATAC ACCAACACTCCTGACACTGTTTTCATACCTTCCCCGTATAAATTAATTTTCATAGATCACAAATGCCTTT CAGTCGTTCGGCCAGTCCCGCTCTGTCTCAGATAATCACTGATACTGATACCGGACAAACGAATTCTACC CGATGTAAGTGTTATTTATCAGCGCTGGAGCAGACCCGAATCACTGTCATTTTAGAAACGCCAGCCAGGC GAGCTGTTTCGCGCAGCGATTTTCCGTTGACCAGGCGCAGGGTACGTATCAGTTCATGTTTCTGCGCATC AGCCACCCGGCCCCGGTATTTCCCTTCAGCTTTCGCCTTACTGATTCCCTCTGACTGACGACGTCGACGA TCTTCGTAATCTTTTCGGGCAATAGCGGCCAGCATATCCAGCAGCATTCCATTTACGGCCTTCAGCATGC TTCGGGTAAAGTCATCACTTACTGTGCTGGATAGCGCCAGATGGCTGGTCGGTAGATCAAGACTGACGAT GGCCAGCTGCTTGTCGGTAATTTGCTTTCTTAGTGTCTCCCAGCCAGCATCATCGAGGCGAGTAAGCCTG TCGACCTGTTCAATGAGGATCACATCACCAGGTTCCGCATCACCAAGAAGCCTGATCAGTTCAGGGCGGT TCATTGTCGTACCGGAGACATTATCGATATACCAGCCAGCAATACGGTGGCCATGTTGGTTTGCAAATGC CTTCAGTGCATTTTTTGCCCGGCTGGCATCCTGCTCTGATGTTGATGCCCGGAGGTAACCAAAAACGAAC ATTTTTTGTCCTGATGGTAACATTTAAGTGGTACTGCTTAAAATGGTATCACTTAAAGGGGTCGGTTCCG GCTGAGGGCGAAATGACACCCTAAGCTTTCGGTTCCTTGGGCCAAAGATATTCGCCAGTCAGTAGAATGT GCGCCCAGCCCAATGGGGATATGTGGGGAAGAAATTCAGGGGGAACATCCAACCCTTCGTTCCGCCGCTC CGTGACGGCATGACCAAGATGGACGGTATTCCAGTAAATGATCACCGCAGTCAATAAATTGAGCCCAGCG ATTCGGTAGTGCTGCCCCTCTGTCGTGCGATCGCGAATTTCCCCCTGCCTCCCGATACGGAGCGCATTTT TGAGCGCATGGTGGGCCTCTCCCTTGTTAAGACCGATCTGAGCACGCCGCTGCATGTCCGTATCCAGGAT CCACTCAATAATGAAAAGGGTCCGTTCAATACGACCAACTTCACGAAGCGCAACTGCAAGGTTGTTTTGT CGTGGGTAAGAAGCGAGCTTGCGCAGGAGTTGGCTGGGCCTGATTTTGCCAGCGGTCATCGTCGCGGCAC AACGGAAAATATCAGGCCAGTTCGCAACGATAAGATCCTCCCGGGCTTTTCCACCTACCAACTTGCGTAA CTCCCTGGGGGTCGTATCGGGATTAAATACGTACAACCGCTTCGATGGCAGATCCCTGATTCGCAGAACG AGATTGTAGCCGAGCAGGCTACTGGCTCCGAACAAATGGTCGGTGAATCCTGCTGTATCGGCATACTGTT CGCGAACATGGCGACCGACCTCGTTCATCAGTAGTCCATCGAGAATATACGGTGCCTCGCTCACGGTCGC CGGGATCGACTGACAAGCGAATGGCGCGAACTGGTCGCTTACGTGAGTATACGCTTTGAGGCCGGGAACA GAACCATATTTGGCATTGACCATGTTCATGACTTCGCCATGCCGCGCTGTCGGGAAAAACTGACCATCGC TCGATGCTGACGTGCCCATCCCCCAGACGCGTGACATCGGCAGTTTACCCTGCGCGGCCACCACAATTGC CAATGCCTGGTTCATGGCTTCGCTTTCAACATGCCAGCGGGCAAGGCGTGAGAGCTGCCAGTAATCATGC GTGTTTGTAGCTTCCGCCATCTTACGCAGGCCCAGATTGAGCCCTTCAGCGAGCAGGACGTTGAGCAGAC CGATCCGGTCGCGACATGGAGCCCCGGTTCTCAGATGGGTAAACGCATCTGTGAAACCAAGGGCTGCATC AACTTCAAGCAGCATGTCGGTAATCCGAACGGACGGCATTCGGCGATACAGATCCAGTATGAGTGCCTCG GCACCATCCGGCACGTCTGCTGTCAACCTGTCGATCCGCAACGTTCCATCTTCTATGCTACCGTGCGGAA TAGTGCCGTTACGGGCAGCCCGGGCCAGCCGCTTAAGAGCGATCGTGAGTCGCGCCTTTCTGTCTGCCAG CCAATCCTGTGGGTTGGAAGGCACGGCCAGTTTTGCATTTTCCTGCGCCGCGATCATCGGCACCAGTACC TGCTTGAGGTCACCATAGCGGCGCGAATGAGCGAGCCAGACATCTCCGGAACGAAAAGCATCCCGGAGGT GAAAGAGTACCGCCACTTCCCAAAGACGGGTATCTCCTTTTTCCTGAGCTCGTAAATGACGGTTCCATTT GGAGCTGGGCCGCAGGAAACGCCTTTCTGGCGATGCAACACCTTTCATCTCTCCGATCGACAAAGCTGCT GCTACCAATGGTCCGGCGACCGGCGCGGCTTCGAGCTTCAGACAGCGCAACATGCGGGGCGCATAACGAC GAAAGCGATGGTATCCCTGCCCGACATATGCAAGAGGCTCATCGGCTAGCGTGTTGCTGAGTTGAGTCCC TGTCGCTACCAGTTGAGCGAGCCGGTCCCATGCAACCGAACTGGCGACAGCCATCTCCAGCGGGGTTCCG TCACTGCGGGCCTCAAGCAACGAAGCTCCCAGCGCGGTGAAGGTACGGATCGTATCCGTGAGTGTGGCTT TAGAGCCGGAAATTGTTTCGTCATGCTGGCGCTTCGCTTCCCGCCAGGTTTTTCCTACGATCCTGTCATG GGTTTCGACTATGGCATCAGCAATCGCCGCTTCCCACTCCACAACACAGACGGCAAGGATCGCCCAGCGG CGGTCCGAAGTGATGTCACGCAAACCGTCGGTGAAGTAGCGTTCACCCTGCCGACGCAGCCGGGCAATGC GATGGGCAGGTATGCTGGCCAAAGCACTATGATTGATATTCAGGGTACGCAGAAATTCGAGCCTGTCGAG CAAACGGTTAGCAGCAGCCGAGTTGTTACCAACCTCGAAGTTGCGAAGCCAGATGAAACGACTGATATTG CCGGCGAGCATTTCACTCAGAAGTTTGTCCAGGTGATCGCGAACATCCGCTGTTAAATTTTCCGCAATCC GCGTTTCAATCCGCCACTCAGCGGCGACCAGAGCATCCGCGCACAAGCGCTCGATTGTCGATACTGCGGG CAGAATGGTGGAAGTTTCCCGACACCGCACAATAAAACGATGAGCAAGATCCTCGTTTGATCTGGCATCT TCGGCCTGGCCGAAAGTCCACTCCCGCAGATCACGGGCACCACGGCCCGTGAAGGTCTTGTAGCCGTAAA TTTCGCGCAGCGTGTCCATGTGCTGCTGACGGGTTTGGCGCCGTGTGGCATAAGTGAGAAGCGCATCAGC CGGAACTCCAAGCTGAGCACCGACGAAGGAAAGGACTTCACGCGGGATCATCTCACCAGGAGCCAGTGCA CGGCCCGGATATCGTAAGGCACAAAGTTGCAGGGCAAAGCCAATCCTGTTTTCCGGTCTGCGGCGCTGCC TAATGTTTTCCAGGTCATCATCGCCCAGCGTGTAGAACTTCAGTAGCGACAGTTCGTCCGTGGGCAGATC GAACAGCGCTGCTCGCTGCCGTTCGGTGAAAATATGGCGTCGTGACAT
Region | 1 |
Region Length | 16.7Kb |
Completeness(score) | questionable(80) |
Specific Keyword | transposase,recombinase |
Region Position | 23285-39992 |
# tRNA | 0 |
# Total Proteins | 13 |
# Phage Hit Proteins | 10 |
# Hypothetical Proteins | 2 |
Phage + Hypothetical Protein % | 92.3% |
# Bacterial Proteins | 1 |
Attachment Site | yes |
# Phage Species | 9 |
Most Common Phage Name(hit genes count) | PHAGE_Salmon_SJ46_NC_031129(3) PHAGE_Entero_fiAA91_ss_NC_022750(2) PHAGE_Thermu_OH2_NC_021784(1) PHAGE_Clostr_phiCD27_NC_011398(1) PHAGE_Lactoc_98201_NC_031064(1) PHAGE_Deep_s_D6E_NC_019544(1) PHAGE_Clostr_phiCD146_NC_028958(1) PHAGE_Geobac_E2_NC_009552(1) PHAGE_Pseudo_F10_NC_007805(1) PHAGE_Staphy_phiPV83_NC_002486(1) PHAGE_Entero_HK022_NC_002166(1) PHAGE_Gordon_Utz_NC_030921(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) PHAGE_Staphy_Pvl108_NC_008689(1) PHAGE_Shigel_Stx_NC_029120(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 23.07% |
GC % | 57.42% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|MUMQ01000111.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_12 40163, gc%: 55.45%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 15 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 23285..23296 | attL | 0.0 | Showinfo_outline |
2 | complement(23396..25111) | PHAGE_Gordon_Utz_NC_030921: hypothetical protein; B0X03_30400; phage(gi100031) | 1.22e-05 | Showinfo_outline |
3 | 25221..28250 | PROPHAGE_Xantho_306: Tn5044 transposase; B0X03_30405; phage(gi21243163) | 0.0 | Showinfo_outline |
4 | 28357..29382 | PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; B0X03_30410; phage(gi557307612) | 2.30e-44 | Showinfo_outline |
5 | 29379..30158 | PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; B0X03_30415; phage(gi557307613) | 8.13e-78 | Showinfo_outline |
6 | 30155..30394 | hypothetical protein; B0X03_30420 | 0.0 | Showinfo_outline |
7 | 30446..31327 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; B0X03_30425; phage(gi100066) | 3.32e-94 | Showinfo_outline |
8 | complement(31577..32896) | PHAGE_Staphy_phiPV83_NC_002486: transposase; B0X03_30430; phage(gi9635722) | 7.29e-29 | Showinfo_outline |
9 | complement(33173..34357) | PROPHAGE_Shewan_MR-1: transposase, putative; B0X03_30435; phage(gi24373689) | 2.31e-142 | Showinfo_outline |
10 | 34459..34689 | PHAGE_Entero_HK022_NC_002166: IS903 transposase; B0X03_30440; phage(gi9634149) | 1.04e-14 | Showinfo_outline |
11 | 34861..35220 | DUF305 domain-containing protein; B0X03_30445 | 0.0 | Showinfo_outline |
12 | 35330..35341 | attR | 0.0 | Showinfo_outline |
13 | complement(35877..36260) | hypothetical protein; B0X03_30450 | 0.0 | Showinfo_outline |
14 | complement(36386..37006) | PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; B0X03_30455; phage(gi209901279) | 3.94e-07 | Showinfo_outline |
15 | complement(37095..39992) | PROPHAGE_Xantho_33913: Tn5041 transposase; B0X03_30460; phage(gi21231545) | 3.56e-34 | Showinfo_outline |
>23285..23296
CAGGGCGAGAGC
>complement(23396..25111)
KlebsiellapneumoniaesubsppneumoniaeMKTGQTTASSSTPVGFPDADSLAALRGWYAGLSSRAAVEHYLAARKAAGQSARGMLGHIRRQLIVFANSRHRPDLADVFQHAPEERQGRAGAVERAIRLLPTLPAPKPQISDSIDQWLSPRTVRALQAYGIHTLSALTVRIPRRRGWWKAIEGLGMTGARQVEAFFAAHPQLTERARALIPIIQPSGIVPWEQLRLPNEVDGSQGNFRAPRNACTLNATNDYEAVQAWLALHETVATQRAYRKEAARLILWAIVERGRALSSLTTDDAIAYRAFVRHPTPRERWVGPPRPRDSVEWRPFSGGLSARSAAYALTVLSALFRWLIEQRYVLANPFAGVKVRGHALRPALDTARGFTEGEWLLLRAIADGLEWSYGWSEPAAQRLRFMLDFGYATGLRASELVGAVLGNVRLDEHGDHWLHLVGKGGKPGKVALPPLAYTALDQYLAQRQLPVSRERWNPKTPLVGSLGEDGNAGITGPHLWCVLRRFFTQAAEAIEADHPVAAEKLRRATPHWMRHSHASHALARGAQLTAVRDNLRHASIATTSMYLHGDELERARQMRQAFGARHVKRGVD
>25221..28250
KlebsiellapneumoniaesubsppneumoniaeMSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
>28357..29382
KlebsiellapneumoniaesubsppneumoniaeMLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
>29379..30158
KlebsiellapneumoniaesubsppneumoniaeMNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
>30155..30394
KlebsiellapneumoniaesubsppneumoniaeMIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSSSVIIPAVAA
>30446..31327
KlebsiellapneumoniaesubsppneumoniaeMSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKYSEAVIAAAARLALEGLGVNGQ
>complement(31577..32896)
KlebsiellapneumoniaesubsppneumoniaeMAASYLPYRPDQSYLLPPSLGEWLPEGHLAYFISETVDTLDLSAFHARYAGGGPGNQPFHPAMMVKVLIYGYASGVFSSRKLARKLYEDVALRVLAAGNFPAHRTLSDFRALHLTELENLFVQVVQLARECGLVKLGTIAVDGTKVKANASRHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
>complement(33173..34357)
KlebsiellapneumoniaesubsppneumoniaeMSIDAVFAQFFDDIPDPRQHAKIYYPFYDVLFLTVCAVIGGADGWEDIEDFGEVHLPWFQSKGLFKNGIPVHDTIARIISGIKPEPFQAAFVRWTQAINQHTEGALVAIDGKTLRSSYNREDRTSTIHMVSAYAAANKLVLGQIKTDAKSNEITAIPDLLALLDIKGCLVSIDAMGCQTEIAETILQQSGDYLLAVKGNQPKLFEAVRQALAPLAATPLCAATMTLDKAHGRIDGREYHIMAAGELAAQFPHWEQLRSIGVAISYRIEKREKITIEQRYYISSKALTRDEFARSVRGHWAIENSLHWVLDVTMGEDDCPIYRGDAAEILACIRHMGLNMLRAETSRKASIRRKQKIAGMSSEYLEKVLNGGVSGNPRKFRHSALWNFLGGWSAA
>34459..34689
KlebsiellapneumoniaesubsppneumoniaeNEAVLVMRKEGLVHWKKISGYHRRSQAETAMYRFKQLMTGKISLRTYNGQVGEVMAYVGAINKLNPLGLPVRKRRV
>34861..35220
KlebsiellapneumoniaesubsppneumoniaeMNKKILILTALLMSPVAVFAVDKTMPMGDHHSMSPASQELMSGMKSMHNDMMAGVMSSDPDVAFAKGMIAHHQGAIQMSETQLKFGKDPEMRKLAEDIIKAQQPEIDQMQKWVKNHEKP
>35330..35341
CAGGGCGAGAGC
>complement(35877..36260)
KlebsiellapneumoniaesubsppneumoniaeMKTVSGVLVYLAVCFLVFTAWLICFAQHAPFPGGEQALTLTYLLNVFFVYFLMVPFIHFFQVETYYKALMGLADGTEHIIQFYEEVPVMLIYLLSAGLTLFFYFIPLKLFFNKKLKLQLQQKQRKDI
>complement(36386..37006)
KlebsiellapneumoniaesubsppneumoniaeMFVFGYLRASTSEQDASRAKNALKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSHLALSSTVSDDFTRSMLKAVNGMLLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
>complement(37095..39992)
KlebsiellapneumoniaesubsppneumoniaeMSRRHIFTERQRAALFDLPTDELSLLKFYTLGDDDLENIRQRRRPENRIGFALQLCALRYPGRALAPGEMIPREVLSFVGAQLGVPADALLTYATRRQTRQQHMDTLREIYGYKTFTGRGARDLREWTFGQAEDARSNEDLAHRFIVRCRETSTILPAVSTIERLCADALVAAEWRIETRIAENLTADVRDHLDKLLSEMLAGNISRFIWLRNFEVGNNSAAANRLLDRLEFLRTLNINHSALASIPAHRIARLRRQGERYFTDGLRDITSDRRWAILAVCVVEWEAAIADAIVETHDRIVGKTWREAKRQHDETISGSKATLTDTIRTFTALGASLLEARSDGTPLEMAVASSVAWDRLAQLVATGTQLSNTLADEPLAYVGQGYHRFRRYAPRMLRCLKLEAAPVAGPLVAAALSIGEMKGVASPERRFLRPSSKWNRHLRAQEKGDTRLWEVAVLFHLRDAFRSGDVWLAHSRRYGDLKQVLVPMIAAQENAKLAVPSNPQDWLADRKARLTIALKRLARAARNGTIPHGSIEDGTLRIDRLTADVPDGAEALILDLYRRMPSVRITDMLLEVDAALGFTDAFTHLRTGAPCRDRIGLLNVLLAEGLNLGLRKMAEATNTHDYWQLSRLARWHVESEAMNQALAIVVAAQGKLPMSRVWGMGTSASSDGQFFPTARHGEVMNMVNAKYGSVPGLKAYTHVSDQFAPFACQSIPATVSEAPYILDGLLMNEVGRHVREQYADTAGFTDHLFGASSLLGYNLVLRIRDLPSKRLYVFNPDTTPRELRKLVGGKAREDLIVANWPDIFRCAATMTAGKIRPSQLLRKLASYPRQNNLAVALREVGRIERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRIAGLNLLTAVIIYWNTVHLGHAVTERRNEGLDVPPEFLPHISPLGWAHILLTGEYLWPKEPKA
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Click on a region in the genome above to show details here.
ORF Start: 23285
ORF Stop: 23296
Strand: Forward
Protein Sequence: CAGGGCGAGAGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 23396
ORF Stop: 25111
Strand: Backward
Protein Sequence: MKTGQTTASSSTPVGFPDADSLAALRGWYAGLSSRAAVEHYLAARKAAGQSARGMLGHIRRQLIVFANSRHRPDLADVFQHAPEERQGRAGAVERAIRLLPTLPAPKPQISDSIDQWLSPRTVRALQAYGIHTLSALTVRIPRRRGWWKAIEGLGMTGARQVEAFFAAHPQLTERARALIPIIQPSGIVPWEQLRLPNEVDGSQGNFRAPRNACTLNATNDYEAVQAWLALHETVATQRAYRKEAARLILWAIVERGRALSSLTTDDAIAYRAFVRHPTPRERWVGPPRPRDSVEWRPFSGGLSARSAAYALTVLSALFRWLIEQRYVLANPFAGVKVRGHALRPALDTARGFTEGEWLLLRAIADGLEWSYGWSEPAAQRLRFMLDFGYATGLRASELVGAVLGNVRLDEHGDHWLHLVGKGGKPGKVALPPLAYTALDQYLAQRQLPVSRERWNPKTPLVGSLGEDGNAGITGPHLWCVLRRFFTQAAEAIEADHPVAAEKLRRATPHWMRHSHASHALARGAQLTAVRDNLRHASIATTSMYLHGDELERARQMRQAFGARHVKRGVD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_30400, hypothetical protein, phage(gi100031), PHAGE_Gordon_Utz_NC_030921
Homolog/Ortholog E-Value: 1.22e-05
ORF Start: 25221
ORF Stop: 28250
Strand: Forward
Protein Sequence: MSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30405, Tn5044 transposase, phage(gi21243163), PROPHAGE_Xantho_306
Homolog/Ortholog E-Value: 0.0
ORF Start: 28357
ORF Stop: 29382
Strand: Forward
Protein Sequence: MLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30410, IS21 transposase, phage(gi557307612), PHAGE_Entero_fiAA91_ss_NC_022750
Homolog/Ortholog E-Value: 2.30e-44
ORF Start: 29379
ORF Stop: 30158
Strand: Forward
Protein Sequence: MNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0X03_30415, IS21 transposition protein, phage(gi557307613), PHAGE_Entero_fiAA91_ss_NC_022750
Homolog/Ortholog E-Value: 8.13e-78
ORF Start: 30155
ORF Stop: 30394
Strand: Forward
Protein Sequence: MIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSSSVIIPAVAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_30420, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 30446
ORF Stop: 31327
Strand: Forward
Protein Sequence: MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKYSEAVIAAAARLALEGLGVNGQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_30425, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 3.32e-94
ORF Start: 31577
ORF Stop: 32896
Strand: Backward
Protein Sequence: MAASYLPYRPDQSYLLPPSLGEWLPEGHLAYFISETVDTLDLSAFHARYAGGGPGNQPFHPAMMVKVLIYGYASGVFSSRKLARKLYEDVALRVLAAGNFPAHRTLSDFRALHLTELENLFVQVVQLARECGLVKLGTIAVDGTKVKANASRHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30430, transposase, phage(gi9635722), PHAGE_Staphy_phiPV83_NC_002486
Homolog/Ortholog E-Value: 7.29e-29
ORF Start: 33173
ORF Stop: 34357
Strand: Backward
Protein Sequence: MSIDAVFAQFFDDIPDPRQHAKIYYPFYDVLFLTVCAVIGGADGWEDIEDFGEVHLPWFQSKGLFKNGIPVHDTIARIISGIKPEPFQAAFVRWTQAINQHTEGALVAIDGKTLRSSYNREDRTSTIHMVSAYAAANKLVLGQIKTDAKSNEITAIPDLLALLDIKGCLVSIDAMGCQTEIAETILQQSGDYLLAVKGNQPKLFEAVRQALAPLAATPLCAATMTLDKAHGRIDGREYHIMAAGELAAQFPHWEQLRSIGVAISYRIEKREKITIEQRYYISSKALTRDEFARSVRGHWAIENSLHWVLDVTMGEDDCPIYRGDAAEILACIRHMGLNMLRAETSRKASIRRKQKIAGMSSEYLEKVLNGGVSGNPRKFRHSALWNFLGGWSAA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30435, transposase, putative, phage(gi24373689), PROPHAGE_Shewan_MR-1
Homolog/Ortholog E-Value: 2.31e-142
ORF Start: 34459
ORF Stop: 34689
Strand: Forward
Protein Sequence: NEAVLVMRKEGLVHWKKISGYHRRSQAETAMYRFKQLMTGKISLRTYNGQVGEVMAYVGAINKLNPLGLPVRKRRV
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30440, IS903 transposase, phage(gi9634149), PHAGE_Entero_HK022_NC_002166
Homolog/Ortholog E-Value: 1.04e-14
ORF Start: 34861
ORF Stop: 35220
Strand: Forward
Protein Sequence: MNKKILILTALLMSPVAVFAVDKTMPMGDHHSMSPASQELMSGMKSMHNDMMAGVMSSDPDVAFAKGMIAHHQGAIQMSETQLKFGKDPEMRKLAEDIIKAQQPEIDQMQKWVKNHEKP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0X03_30445, DUF305 domain-containing protein
Homolog/Ortholog E-Value: N/A
ORF Start: 35330
ORF Stop: 35341
Strand: Forward
Protein Sequence: CAGGGCGAGAGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
ORF Start: 35877
ORF Stop: 36260
Strand: Backward
Protein Sequence: MKTVSGVLVYLAVCFLVFTAWLICFAQHAPFPGGEQALTLTYLLNVFFVYFLMVPFIHFFQVETYYKALMGLADGTEHIIQFYEEVPVMLIYLLSAGLTLFFYFIPLKLFFNKKLKLQLQQKQRKDI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_30450, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 36386
ORF Stop: 37006
Strand: Backward
Protein Sequence: MFVFGYLRASTSEQDASRAKNALKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSHLALSSTVSDDFTRSMLKAVNGMLLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0X03_30455, putative phage site-specific recombinase, phage(gi209901279), PHAGE_Clostr_phiCD27_NC_011398
Homolog/Ortholog E-Value: 3.94e-07
ORF Start: 37095
ORF Stop: 39992
Strand: Backward
Protein Sequence: MSRRHIFTERQRAALFDLPTDELSLLKFYTLGDDDLENIRQRRRPENRIGFALQLCALRYPGRALAPGEMIPREVLSFVGAQLGVPADALLTYATRRQTRQQHMDTLREIYGYKTFTGRGARDLREWTFGQAEDARSNEDLAHRFIVRCRETSTILPAVSTIERLCADALVAAEWRIETRIAENLTADVRDHLDKLLSEMLAGNISRFIWLRNFEVGNNSAAANRLLDRLEFLRTLNINHSALASIPAHRIARLRRQGERYFTDGLRDITSDRRWAILAVCVVEWEAAIADAIVETHDRIVGKTWREAKRQHDETISGSKATLTDTIRTFTALGASLLEARSDGTPLEMAVASSVAWDRLAQLVATGTQLSNTLADEPLAYVGQGYHRFRRYAPRMLRCLKLEAAPVAGPLVAAALSIGEMKGVASPERRFLRPSSKWNRHLRAQEKGDTRLWEVAVLFHLRDAFRSGDVWLAHSRRYGDLKQVLVPMIAAQENAKLAVPSNPQDWLADRKARLTIALKRLARAARNGTIPHGSIEDGTLRIDRLTADVPDGAEALILDLYRRMPSVRITDMLLEVDAALGFTDAFTHLRTGAPCRDRIGLLNVLLAEGLNLGLRKMAEATNTHDYWQLSRLARWHVESEAMNQALAIVVAAQGKLPMSRVWGMGTSASSDGQFFPTARHGEVMNMVNAKYGSVPGLKAYTHVSDQFAPFACQSIPATVSEAPYILDGLLMNEVGRHVREQYADTAGFTDHLFGASSLLGYNLVLRIRDLPSKRLYVFNPDTTPRELRKLVGGKAREDLIVANWPDIFRCAATMTAGKIRPSQLLRKLASYPRQNNLAVALREVGRIERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRIAGLNLLTAVIIYWNTVHLGHAVTERRNEGLDVPPEFLPHISPLGWAHILLTGEYLWPKEPKA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_30460, Tn5041 transposase, phage(gi21231545), PROPHAGE_Xantho_33913
Homolog/Ortholog E-Value: 3.56e-34
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download