Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1185358632 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1185358632.PHASTER.zip
gi|00000000|ref|NBOQ01000074.1| Klebsiella pneumoniae strain ARP-657 plasmid unnamed37 contig74, 24754, gc%: 44.55%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 7.5Kb | incomplete | 20 | 13 | 17052-24633 info_outline | PHAGE_Burkho_KL3_NC_015266(2) | 46.68% | Show info_outline |
Region DNA
>1 17052-24633 ATGTCTGAAAAGATAATCAAAAGGGGGGGGGAGCTCATAGAGTTGCCCTCTCACAACAACAATGCCGTAA AAACCGAGATGCAGACCAGGACAGAAAAACCCAAAACGAAAATCACCAAAGCGCAAAGAGAAGAGCTCAG ATTAAAATTTGCGTGCAGGTGTGCCTACTGCGGCTGTGAACTGAAGGAAAAGGGCTGGCATGCCGATCAT GTAGAGCCAGTTCGTAGAGATTTCGATATAGTTCGCGCGCCCCAGGGGAGTAGGGTGAGTCACGTCGCAC GCAGCAATGGACGAGTATTTCATCCTGATCGCCATGATTTAGATAATCTTTTCCCTGCGTGTTCAGCATG CAACCTTTTCAAAGCGACATATTCGATCGAAGGGTTCAGGGAACAGATTGCCCACCAGCCTGAGCGTGCT CAGGCATACTCAGTCAATTTCCGCACAGCCCAACGATTTGGGCTGGTAACGGTTATTGAGAAACCTGTGG TTTTCTGGTTTGAGGCGTACGATGCCTCAAAAGAACTTGAACCCCAGCTTTCTTATTTTTTGGCACACCG GGAGGCTTATCAGGATTGAGGTTTGCTGTCTTTTCTTGGACTGATGTCGGCTTCTTTAATCCGTTCCTCA GCTTGCATTCCGGTATAGATACATATAGCACTATTGTGATTATTAAAAGCAATCTGACTTTTGAAATCAC AAAAATATGCAGGGTTCTTTGTCGCTATAGTATCGCCTTTCTGGCACTTCCCCTTCAGGCCTTCAATCAA TGAGTCATTATCGGTGCCCATACATGCTTTGCCAGTTGGGGTTATACCTTCTTCCTTACAGCCAGAAAGA AAGACTGTGGCACAGATCAACACTGTAAGCATTTTTTTTTGCATTGTTCCCATTCCCTGTTATACATGGT TTTTCAATTATAGACATTACCTGGTCTGATGCATCTACCAGTAATTGTATCGCGTCTATCTGGCTTAATG CCTCAACATGGTAAAAACGGATAAACGCATACCATCTCAGCTCCCCCTTGACCCAAAACTTCCGGCCAAT TTTGATGACACCCCTAATAGTGAACGAAGCAAAGAACAGCTAGATGAATGGTGGGATCATCCTTATGGGA TCACTAAACCAGACGGCTCATTTACTGACAGATGTCTTAACGGTGGAGCGAGGGACCGCTCATCGGTGCT TGGAAAGGTAAGAACTTACGAAGAGGCTTGTGTCCTGGCTCACGACGCCCAGGCAAAATGGGTCAATACC CGTCTGAAACCTATCTTCATGTACTCTAACGAACCGCCCTTCAGGCTAGTGGTTCAGTCCCAGCGACCAG ATTACGAAGAAAGCATCATTGAGGAGTTCAATACTATTGATGAAATTAATTTGTTCTTGTTAAAGCAGCA CCCCACCCGAACTACTTGAATTACCTCCGACCATCGACACAAAACTCATTGATCTTGAGGCCGTGGCCTG GTATGGGAAAGAGCTTGATCTCGCTGCCTCCAGACTAAAGGCTGAGCTTATGGCCATTTCTGTTTTGCGT GAGGAGGTCAGTATGGCCGTTCGTAGGAAAAAAGGAGACGCCAGTTAGCGGCGGACTGTGGGATTACCGG CGTTTATCAATAGTGTCAACTATCAAGCTTATGTAAGCAGACCTCGAATCTTCACTGTCGGACTGTCTTG CATAGGCTTTTTTTATTGCTCCATCGGAGAGTGGATGCTTCATATTGAGGAATAACATTACCACCAACAC ATCAATACAGCGGGCGGATGCAAAATACTCATAGATATAATCGTACGTCGTTTTTTTAAAATCGCCCCCC ACTGAGCCGAGGTCAATCAGCGCTGCGATTATCTCTCCTGCCTCGCCATTCCTAACAGTTGGCTTCAACT GGCTTAGTTTTCGTTTCAGAGCCTCATCGCGATCTCGTTGTTGCTGTAGATAATCAGAAAGGCTATTAAA CATTCAAACTGGTCCTGTGCATTCTAATCTCACCTATCATACGGACATTCTTAAAATCTTGGAACCAGGG AAAGATACGGTCGGATCTAGACCGGTAGTGGGGGAGTATCGACTTTTACCTTTCGAAAAAACAGTCGTTT TATAAAAGGGGTTGCAGCGTACCTAAAATAAGGTACAATTTGTTTGAAAGGGAAGGCTACGGAGCCGCCC ATTAACTGCCTAAGGAGGCGTTCATGTCAACTATCCCTCAATTAGCTAAGCTGGGTTTTTCCTCAGATGT TGTTCCTGTGATCAATACCCCAGCGCCCAATATGACTCGCGGATTTGAGCGCTTTCATATCAGCTATAAC AGTTCATCTGCCGGGTATGGCTGCGATACAACCGCTCTGGTTCTGGATGGCCGTGTGTTTTTCGTACTGA ACGGGGACCATGCCTGTGATATGACCAAAGCTGCCGCAGCACGCGGTATCGATGGCTGCATTGACGTCTT CATAGACCGTATCGAGTCGGCTAGTCGACACAGCGAGCATAAAATGGCTATTGGTCTGACAAACGATGAG TTCGGATTGATGCCGACCGCGCTCGCTGTCATCGGAGAAGAGAACATCCTCCGTCTTCTATCTGCTGTGA CAGGAAACGTTCAGGACTTTTCAGCGTACGGTATTAATCAGGATTAACCATTCTCAGCCCCTACTGACCC ATAACTTTTGAGGCTTGCATGAAACTTGAAGATTTAACAGGTGACGACCGTACTCTGGTTGTAGTCGCTC TCCAGGCTCTTTTCCGGGAGCGAAGTAACTCATATCATGCAGCCTGCACCGCCTGCCAGCTTGCAGGCGA GAAACCACCAGCTGAGAATCTTTTTGGCGTGGAGGAAAGTATTTCGGCAATTCGCCGGATGGGAGCTCTC CCGCAGAGATGAAGCCAGATATGAAATCAACCAATGAGAACGAAAACAGACGCGGATTGCTCATCAGTGC AGGTCAGTTGCTGTTTGGTGAGCGCTGGCAAACAGAACTCGCCAGAGCCCTTGGACTGTCGGACGGCAGA CGCATCCGGCAGTGGCTTTCTGGTGACAGACCAATACCTGTCGGTATATGGGATGACCTGCGTGAACTCC TGGAGGACAGAAGCTCCAAAATGGAGCTGATAGTTAAACAGATTCAAGCCAGTAAGAAAGATAAAATGTA GGTACCTGCAGCTGACCATTAACAGGAGGCATAATGACGCAACAATTTTCTCCTCCGTATGAGGTGGTGG AAATGTCCCGGCGTATTTTTGAAAATTTAATCTCCAGTACTCTTAAGACATCTGATACCACAGGAACCTG CATGTATGGTTCGATTCTGGTTTCCATGCTACTGGAGAAATTTTCTGGGGTCAGGACGCGTATCGCCGGT GGTGATGGTGTTGGTGATGGCGGAATTGTCACCCCTGAAGGCATGAAAGGGCATTACTGGGTTGTCGCTA ACGTTCATGGCATGCACTTTATTGTAGATATAACTGCCGATCAGTTCGGTATGGACAGTATCATATACAA AGGTCTTAAGGATGCCCCGGAGTACGTGGAAGGGCACCAGGCTGTAGTAGATGAGCATGTTGCTGATAGT TTTCAGAAGCTTTTTCAAAGCTACTCTTCAGAGGATACCCGGCTATGAGCCCTGTCAAAAATGGCGACAT CATGAAACGCCTCAGAAAAATGATGCCCAAGACCGTTGAGCCTGCATTCAATTCACCTGAGGAGTTGTTG CAATGGCAGCGGGAACAGGGACAGCTTCGCTCGGAGGCCCTTGAGCGCGAGAATAGAGCTATGAAAATGC AAAGGACTTTTAACCGGTCAGGGATACGTCCTCTGCATCAGAATTGTTCATTTGATAACTACTTAGTTGA ATGTGAGGGACAAATGAAAGCACTCATGCTCGCCCGCCAATATGTAGAAGAATTTGAGGGGAACATCGCC AGTTTTATTTTCTCTGGAAAACCAGGCACTGGCAAAAACCATTTGGCAGCAGCAATCTGTAATGACCTCT TGTTGCGGGGAAAGTCAGTTTTAATCATAACGGTTGCAGACATCATGTCGTCCATGAAAGATACCTTCGG CAACAGGAATACCAGTGAAGAACAACTACTGAACGATCTCAGTAAAGTTGACCTTCTGGTCATTGATGAA ATTGGAGTGCAAACAGAATCACGCTATGAAAAAGTTATCATCAACCAGATTGTTGATCGCAGGTCATCAT CAAAACGCCCTACGGGGATGCTCACTAACAGCAATATGGAAGAGATGAACAAACTTGTAGGTGAGCGCGT GATGGACCGCATGCGTCTCGGAAACAGCCTATGGGTAGTGTTTAACTGGGAAAGCTACCGACATCGTGTT TCTGGAAAAGAATACTGAATCGACTGGAAAAACAATGAGAGTACTGCCTGGCAGAGCACGTTATACTGGT TAAAATCACAGATATTATTTGCGCTGGGTTAAATGAGTGATAGAATATCACGCATATAACCTGTGGAGGC AATAATGTCTGAATTTGATTCCCTTGCGGAAGAGCTGGTGGAAGAGGCACGTAATGAAGAGGCCAGACAA CAGCAAAGGGACCTGTCCCTGATAGGGAAAGTCCTTGAAATCTATGATCAGAAGTTTGTTGCCGAACTTT TGCGTAAGCTGGGAAATTCAGACTGGACCAGGGAGACCCTGAACCGCTGGATTAACGGGAAATGTGGGCC ACGTTCACTTACCGTAACTGAGGCATCGCTTCTTGAAAGACTGCTCCCGCAGCCGCCAGCAAACCATCCC AATTATGCTTTTCGCTTCATCGATCTCTTCGCCGGTATCGGCGGTATCCGTCATGGGTTTGAAGCCATTG GCGGCCAGTGTGTTTTCACAAGTGAATGGAACAGCTATTCAGTCAAAACTTATAAAGCAAACTGGTACTG CGATCCCGAAGCGCATATCTTCAATTCGGACATCCGCGATGTGACACTCAGTCATAAGGAAGATGTCAGC GAAGAAGATGCCTACGCCCATATCGATAAATCGATACCCGATCATGATGTTCTGCTGGCTGGTTTCCCGT GTCAGCCCTTTAGCCTTGCAGGTGTGAGCAAAAAAAACTCACTTGGCCGTAAACACGGTTTTGAATGTGA CACCCAGGGGACCCTATTCTTTGATGTGGCTCGTATCATCATGGCAAAAAAACCGGCCATCTTTGTACTC GAGAACGTCAAGAACCTCAAAAGCCATGATAAAGGGAAAACTTTCCGTGTCATTATGGATACCCTGAATG AGCTCGGTTACGACGTTGCTGATGCTGAAGCTACAGGTGCGGATGATCCAAAAGTTATAGATGGTAAGCA TTTCATCCCTCAGCACCGGGAGCGTATTGTTCTGGTGGGCTTCAGACGTGACCTGAATTTAAGTCAGGGA TTTAGCCTTGCTGACATTTCTTCGCTGTTTCCTGAAAGAAAAGTGCTGTTCAGAGAACTCCTTGACAGTG ATGTTGATGATAAATACACACTAACGCCAAAGCTGTGGGATTATCTCTATAAATACGCCAAAAAACACCA AGAGAAAGGTAATGGCTTTGGCTTTGGCCTGGTTAAACCAGACGATGATAAAGCGATTTCCAGAACAATA TCAGCAAGGTATCACAAAGATGGCAGTGAATCGCTTGTTGATCGTGGTTGGGATAGCGAACTCGGTGAAA AAAACTTTAATGACCCTGATAACATGGCCAGACGTCCTCGGCGTCTAACACCGCGTGAGTGTGCCCGGCT AATGGGATTTGAGCAGCCAGGGAAAGTAACTTTTCGAATCCCCGTATCCGATACTCAAGCTTACCGCCAG TTCGGAAATTCCGTCATCGTGCCGGTCTTTGATGCAGTAGCGAAATTGCTGGAGTCACGGATCATCGAGG CTGTAAAGGCCCGGAAATAAATGCACTAAAAGAGCCCCAAGGGGCTCTTCAAATATCTATGCTGGTATCA TCCCATGCGCATACGACTCTCGCCAGATGTGAGGGGATGTCACCAATAGAGTTTTTTGATTTCATCAATA AACGCAGATAGTGACATTAACTCACCCCTGATTTCCTCAGGAAAGGCCTTATGCAACCCTACCGGTACAA CGAGCCGTATCCCCTCAGACTGCATTTCCCTGAACTGGGCCACAGAGACGCCCTGCTGTACGGTGAACAG GTGTACTGTATCAATTCTGTCAGCCTCATTCAGTACCTGCCGCCAGCGGTCCTTACAGGTGGTTTTAACC CCCAACATGCGTAACCGTTCAGCTGGGTAATCAGGATCGTGATAGGCAGCACCGGAAGGAAAGATGAAAT CGGGTTTTTTCTTACCTTCCGTGATAGCCTGGGTTTCAAAGCTCGTTGCACCGTGTTCTTTGAAAAGAGA TTCAAGATGGAGCTCAAGACTTTTCCCGGCACGAGACTTCCTCCGGTTACTCACTGAATTAGCAAGCGTA ATAAAATCATTCACCGTAGCAAAGCCTTCGGCTATCTGACCCAGCACGTGCAGTTCCTCAACGGCAAGAA AAATTTCAAACTCAATTTTCCTCCTCCGCGTCAGTTGTGAGTCCGGGTCGTCAGTTGTTCTATCGTAATG ACATGCGGCAAAACTAATAATCTCCCTTCCTGAAGGGAAGTGGTGAGTCCATTCGGGTGGAAGCTTATAC TTTGTTCTGCCAGGAGAAGTTTCTGTAACGAACCCTCCAATTATTTTATCTCCCGGACCAAATATCGTTG CTCCCGGGATAACTTCACCAATAATTGGTTCAAGAATATCTTCCTCGGTCAGGTCCTTGCAGACCCAGAC ATCACAATAACTGGATGATGTTCCAGGCACATGGTCGAAGGCGAGAAGTGCCAGAGCGCCGGTATTCTCC GGATTCTGGAGAGGATTTTGTCTACCAAAGCCCGTCAGACGCTTTTCATCACGGGTGCCCCCGAAAAATT TATTGTTGTAGTAAATGGCCCTTACATCATCAAGGTCAGGGCAATCAGGATGAGATGACACGTGAACAGA AAAAAGAGCTTCAGGATTTCTTAACTGAGTATCACGGAGGGAAGGAAACAGCTCATCAATGACGGCTCCC GGCATGTAAAGACCAGACTGGTGGGATCTTGTAGCACCGGTATCGTTCGCGGATAAGCGCTTAACGCTGA TGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAAT GGTTTCGCGAAAAATCAATAATCAGACAACAAGATGTGCGAACTCGATATTTTACACGACTCTCTTTACC AATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCATTACTTGACTG TAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAA CGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTA GCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATTCGTGAGCAAAAACG ACTTATGGTATTGCGAGTGACC
Region Details
| Region | 1 |
| Region Length | 7.5Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | transposase |
| Region Position | 17052-24633 |
| # tRNA | 0 |
| # Total Proteins | 13 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 5 |
| Phage + Hypothetical Protein % | 92.3% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Burkho_KL3_NC_015266(2) PHAGE_Entero_JSE_NC_012740(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Phage_Gifsy_2_NC_010393(1) PHAGE_Salmon_g341c_NC_013059(1) PHAGE_Citrob_Miller_NC_025414(1) PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1) PHAGE_Xantho_OP2_NC_007710(1) PHAGE_Entero_RB43_NC_007023(1) PHAGE_Citrob_vB_CfrM_CfP1_NC_031057(1) PHAGE_Entero_Phi1_NC_009821(1) PHAGE_Phage_Gifsy_1_NC_010392(1) PHAGE_Shigel_SfII_NC_021857(1) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1) PHAGE_Edward_eiAU_183_NC_023555(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Salmon_SPN3UB_NC_019545(1) PHAGE_Entero_HK225_NC_019717(1) PHAGE_Shigel_Stx_NC_029120(1) PHAGE_Shigel_POCJ13_NC_025434(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 15.38% |
| GC % | 46.68% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NBOQ01000074.1| Klebsiella pneumoniae strain ARP-657 plasmid unnamed37 contig74, 24754, gc%: 44.55%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 13 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 17052..17630 | PHAGE_Edward_eiAU_183_NC_023555: DNA repair ATPase; B7D73_27315; phage(gi589889282) | 1.58e-53 | Showinfo_outline |
| 2 | complement(17621..17935) | hypothetical protein; B7D73_27320 | 0.0 | Showinfo_outline |
| 3 | 18060..18470 | PHAGE_Entero_P1_NC_005856: Lxr; B7D73_27325; phage(gi46401722) | 4.79e-53 | Showinfo_outline |
| 4 | complement(18655..19014) | hypothetical protein; B7D73_27330 | 0.0 | Showinfo_outline |
| 5 | 19245..19688 | hypothetical protein; B7D73_27335 | 0.0 | Showinfo_outline |
| 6 | 19730..19933 | hypothetical protein; B7D73_27340 | 0.0 | Showinfo_outline |
| 7 | 19942..20202 | PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; B7D73_27345; phage(gi971749619) | 1.11e-14 | Showinfo_outline |
| 8 | 20235..20669 | hypothetical protein; B7D73_27350 | 0.0 | Showinfo_outline |
| 9 | 20666..21409 | PHAGE_Shigel_Stx_NC_029120: DNA replication protein; B7D73_27355; phage(gi985761263) | 2.44e-82 | Showinfo_outline |
| 10 | 21536..22951 | PHAGE_Burkho_KL3_NC_015266: gp47; B7D73_27360; phage(gi327198092) | 4.80e-130 | Showinfo_outline |
| 11 | complement(23041..24243) | PHAGE_Burkho_KL3_NC_015266: gp45; B7D73_27365; phage(gi327198090) | 3.62e-41 | Showinfo_outline |
| 12 | 24188..24355 | LPS core heptose(II) kinase RfaY; B7D73_27370 | 0.0 | Showinfo_outline |
| 13 | 24295..24633 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; B7D73_27375; phage(gi24375070) | 1.47e-39 | Showinfo_outline |
Sequence
>17052..17630
KlebsiellapneumoniaeMSEKIIKRGGELIELPSHNNNAVKTEMQTRTEKPKTKITKAQREELRLKFACRCAYCGCELKEKGWHADHVEPVRRDFDIVRAPQGSRVSHVARSNGRVFHPDRHDLDNLFPACSACNLFKATYSIEGFREQIAHQPERAQAYSVNFRTAQRFGLVTVIEKPVVFWFEAYDASKELEPQLSYFLAHREAYQD
Sequence
>complement(17621..17935)
KlebsiellapneumoniaeMQKKMLTVLICATVFLSGCKEEGITPTGKACMGTDNDSLIEGLKGKCQKGDTIATKNPAYFCDFKSQIAFNNHNSAICIYTGMQAEERIKEADISPRKDSKPQS
Sequence
>18060..18470
KlebsiellapneumoniaeMPSQLPLDPKLPANFDDTPNSERSKEQLDEWWDHPYGITKPDGSFTDRCLNGGARDRSSVLGKVRTYEEACVLAHDAQAKWVNTRLKPIFMYSNEPPFRLVVQSQRPDYEESIIEEFNTIDEINLFLLKQHPTRTT
Sequence
>complement(18655..19014)
KlebsiellapneumoniaeMFNSLSDYLQQQRDRDEALKRKLSQLKPTVRNGEAGEIIAALIDLGSVGGDFKKTTYDYIYEYFASARCIDVLVVMLFLNMKHPLSDGAIKKAYARQSDSEDSRSAYISLIVDTIDKRR
Sequence
>19245..19688
KlebsiellapneumoniaeMSTIPQLAKLGFSSDVVPVINTPAPNMTRGFERFHISYNSSSAGYGCDTTALVLDGRVFFVLNGDHACDMTKAAAARGIDGCIDVFIDRIESASRHSEHKMAIGLTNDEFGLMPTALAVIGEENILRLLSAVTGNVQDFSAYGINQD
Sequence
>19730..19933
KlebsiellapneumoniaeMKLEDLTGDDRTLVVVALQALFRERSNSYHAACTACQLAGEKPPAENLFGVEESISAIRRMGALPQR
Sequence
>19942..20202
KlebsiellapneumoniaeMKSTNENENRRGLLISAGQLLFGERWQTELARALGLSDGRRIRQWLSGDRPIPVGIWDDLRELLEDRSSKMELIVKQIQASKKDKM
Sequence
>20235..20669
KlebsiellapneumoniaeMTQQFSPPYEVVEMSRRIFENLISSTLKTSDTTGTCMYGSILVSMLLEKFSGVRTRIAGGDGVGDGGIVTPEGMKGHYWVVANVHGMHFIVDITADQFGMDSIIYKGLKDAPEYVEGHQAVVDEHVADSFQKLFQSYSSEDTRL
Sequence
>20666..21409
KlebsiellapneumoniaeMSPVKNGDIMKRLRKMMPKTVEPAFNSPEELLQWQREQGQLRSEALERENRAMKMQRTFNRSGIRPLHQNCSFDNYLVECEGQMKALMLARQYVEEFEGNIASFIFSGKPGTGKNHLAAAICNDLLLRGKSVLIITVADIMSSMKDTFGNRNTSEEQLLNDLSKVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLVGERVMDRMRLGNSLWVVFNWESYRHRVSGKEY
Sequence
>21536..22951
KlebsiellapneumoniaeMSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKARK
Sequence
>complement(23041..24243)
KlebsiellapneumoniaeMCIHLNLMIFTKIIRGFISVKRLSANDTGATRSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLDDVRAIYYNNKFFGGTRDEKRLTGFGRQNPLQNPENTGALALLAFDHVPGTSSSYCDVWVCKDLTEEDILEPIIGEVIPGATIFGPGDKIIGGFVTETSPGRTKYKLPPEWTHHFPSGREIISFAACHYDRTTDDPDSQLTRRRKIEFEIFLAVEELHVLGQIAEGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFKEHGATSFETQAITEGKKKPDFIFPSGAAYHDPDYPAERLRMLGVKTTCKDRWRQVLNEADRIDTVHLFTVQQGVSVAQFREMQSEGIRLVVPVGLHKAFPEEIRGELMSLSAFIDEIKKLYW
Sequence
>24188..24355
KlebsiellapneumoniaeLMNPLMILVKIIKLRWIHILSYDQMVSRKINNQTTRCANSIFYTTLFTNSAPNYT
Sequence
>24295..24633
KlebsiellapneumoniaeMCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRVT
Klebsiella pneumoniae strain ARP-657 plasmid unnamed37 contig74
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 24754 bps
Phages: 1
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: B7D73_27315 (Region 1)
Locus: B7D73_27315ORF Start: 17052
ORF Stop: 17630
Strand: Forward
Protein Sequence: MSEKIIKRGGELIELPSHNNNAVKTEMQTRTEKPKTKITKAQREELRLKFACRCAYCGCELKEKGWHADHVEPVRRDFDIVRAPQGSRVSHVARSNGRVFHPDRHDLDNLFPACSACNLFKATYSIEGFREQIAHQPERAQAYSVNFRTAQRFGLVTVIEKPVVFWFEAYDASKELEPQLSYFLAHREAYQD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7D73_27315, DNA repair ATPase, phage(gi589889282), PHAGE_Edward_eiAU_183_NC_023555
Homolog/Ortholog E-Value: 1.58e-53
Locus 2: B7D73_27320 (Region 1)
Locus: B7D73_27320ORF Start: 17621
ORF Stop: 17935
Strand: Backward
Protein Sequence: MQKKMLTVLICATVFLSGCKEEGITPTGKACMGTDNDSLIEGLKGKCQKGDTIATKNPAYFCDFKSQIAFNNHNSAICIYTGMQAEERIKEADISPRKDSKPQS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27320, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 3: B7D73_27325 (Region 1)
Locus: B7D73_27325ORF Start: 18060
ORF Stop: 18470
Strand: Forward
Protein Sequence: MPSQLPLDPKLPANFDDTPNSERSKEQLDEWWDHPYGITKPDGSFTDRCLNGGARDRSSVLGKVRTYEEACVLAHDAQAKWVNTRLKPIFMYSNEPPFRLVVQSQRPDYEESIIEEFNTIDEINLFLLKQHPTRTT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7D73_27325, Lxr, phage(gi46401722), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 4.79e-53
Locus 4: B7D73_27330 (Region 1)
Locus: B7D73_27330ORF Start: 18655
ORF Stop: 19014
Strand: Backward
Protein Sequence: MFNSLSDYLQQQRDRDEALKRKLSQLKPTVRNGEAGEIIAALIDLGSVGGDFKKTTYDYIYEYFASARCIDVLVVMLFLNMKHPLSDGAIKKAYARQSDSEDSRSAYISLIVDTIDKRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27330, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: B7D73_27335 (Region 1)
Locus: B7D73_27335ORF Start: 19245
ORF Stop: 19688
Strand: Forward
Protein Sequence: MSTIPQLAKLGFSSDVVPVINTPAPNMTRGFERFHISYNSSSAGYGCDTTALVLDGRVFFVLNGDHACDMTKAAAARGIDGCIDVFIDRIESASRHSEHKMAIGLTNDEFGLMPTALAVIGEENILRLLSAVTGNVQDFSAYGINQD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27335, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: B7D73_27340 (Region 1)
Locus: B7D73_27340ORF Start: 19730
ORF Stop: 19933
Strand: Forward
Protein Sequence: MKLEDLTGDDRTLVVVALQALFRERSNSYHAACTACQLAGEKPPAENLFGVEESISAIRRMGALPQR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27340, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: B7D73_27345 (Region 1)
Locus: B7D73_27345ORF Start: 19942
ORF Stop: 20202
Strand: Forward
Protein Sequence: MKSTNENENRRGLLISAGQLLFGERWQTELARALGLSDGRRIRQWLSGDRPIPVGIWDDLRELLEDRSSKMELIVKQIQASKKDKM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27345, hypothetical protein, phage(gi971749619), PHAGE_Mannhe_vB_MhS_535AP2_NC_028853
Homolog/Ortholog E-Value: 1.11e-14
Locus 8: B7D73_27350 (Region 1)
Locus: B7D73_27350ORF Start: 20235
ORF Stop: 20669
Strand: Forward
Protein Sequence: MTQQFSPPYEVVEMSRRIFENLISSTLKTSDTTGTCMYGSILVSMLLEKFSGVRTRIAGGDGVGDGGIVTPEGMKGHYWVVANVHGMHFIVDITADQFGMDSIIYKGLKDAPEYVEGHQAVVDEHVADSFQKLFQSYSSEDTRL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7D73_27350, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: B7D73_27355 (Region 1)
Locus: B7D73_27355ORF Start: 20666
ORF Stop: 21409
Strand: Forward
Protein Sequence: MSPVKNGDIMKRLRKMMPKTVEPAFNSPEELLQWQREQGQLRSEALERENRAMKMQRTFNRSGIRPLHQNCSFDNYLVECEGQMKALMLARQYVEEFEGNIASFIFSGKPGTGKNHLAAAICNDLLLRGKSVLIITVADIMSSMKDTFGNRNTSEEQLLNDLSKVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLVGERVMDRMRLGNSLWVVFNWESYRHRVSGKEY
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7D73_27355, DNA replication protein, phage(gi985761263), PHAGE_Shigel_Stx_NC_029120
Homolog/Ortholog E-Value: 2.44e-82
Locus 10: B7D73_27360 (Region 1)
Locus: B7D73_27360ORF Start: 21536
ORF Stop: 22951
Strand: Forward
Protein Sequence: MSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKARK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7D73_27360, gp47, phage(gi327198092), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 4.80e-130
Locus 11: B7D73_27365 (Region 1)
Locus: B7D73_27365ORF Start: 23041
ORF Stop: 24243
Strand: Backward
Protein Sequence: MCIHLNLMIFTKIIRGFISVKRLSANDTGATRSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLDDVRAIYYNNKFFGGTRDEKRLTGFGRQNPLQNPENTGALALLAFDHVPGTSSSYCDVWVCKDLTEEDILEPIIGEVIPGATIFGPGDKIIGGFVTETSPGRTKYKLPPEWTHHFPSGREIISFAACHYDRTTDDPDSQLTRRRKIEFEIFLAVEELHVLGQIAEGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFKEHGATSFETQAITEGKKKPDFIFPSGAAYHDPDYPAERLRMLGVKTTCKDRWRQVLNEADRIDTVHLFTVQQGVSVAQFREMQSEGIRLVVPVGLHKAFPEEIRGELMSLSAFIDEIKKLYW
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7D73_27365, gp45, phage(gi327198090), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 3.62e-41
Locus 12: B7D73_27370 (Region 1)
Locus: B7D73_27370ORF Start: 24188
ORF Stop: 24355
Strand: Forward
Protein Sequence: LMNPLMILVKIIKLRWIHILSYDQMVSRKINNQTTRCANSIFYTTLFTNSAPNYT
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B7D73_27370, LPS core heptose(II) kinase RfaY
Homolog/Ortholog E-Value: N/A
Locus 13: B7D73_27375 (Region 1)
Locus: B7D73_27375ORF Start: 24295
ORF Stop: 24633
Strand: Forward
Protein Sequence: MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRVT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B7D73_27375, ISSod3, transposase, phage(gi24375070), PROPHAGE_Shewan_MR-1
Homolog/Ortholog E-Value: 1.47e-39
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download