Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1241977251 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1241977251.PHASTER.zip
gi|00000000|ref|NTHR01000122.1| Klebsiella pneumoniae strain BA11544 plasmid pIncFIB 14440, gc%: 52.98%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 11.6Kb | incomplete | 20 | 14 | 1230-12912 info_outline | PHAGE_Entero_P1_NC_005856(4) | 53.70% | Show info_outline |
Region DNA
>1 1230-12912 TTATTTTTCGAAGGACTGCATGTTGCCCATAACCAGCCTGATGGCCTTATCTAACTCAGCCTGAACTGAA GCAGGAAGACGGGCAAATTCATAGGTCACTAAGCGTTTAGACGGATCGGTTTTCTTCCGGGCAAACTGCT TTTTGTCTTCAAACTCACGTAGCTTTTCAGTTTGTACAGTTTTCACTGGCGCTGGCTTCAGCTGCTTCGA ATGGCGTTTAAAAGAGTCCATAATTAGCGACTTACTTACGCTTTCAACTTTTGCTGCACTGATGTCTGCC TGCACTTTTCCGAGCAAATCAGACAGAGGCACACCTTTGCTATCTAAGTCCTCTGAAATTTTTAACAGCA GCTGGTAATCAGCAAGGGAGAGTTCATTGATAACCGGGAATAACTCGACCATTTCAGCTGGCACAGAAGC AGCTTGAAACGCTCGGGAAACGCTTGCCGGTGAGACGTCCTCTACGCGCGCAATTTCATCCTTAGACATG CCATTTGCGTACATAAATTGATATCTTTGACCTATCTCACGAAGCGTATGCTCACGCGCGGTCTGAATGT CTTTGGCAAGCTGACGAGCATCTTCAAGACTTATCTCATCTTCTGTAACCAGAATTTCGAATTTCGCGCC ACTGAAGATACATGCCGCCGCGCCGGAACCATCTAACACTTCAATACAACCGTTAATAACTCGGCCGATT GCTGGGAAAAATTGCTGCAGGTTGATAGTTCGCGTTATGTCGCTCACTGACTCAGGGGTTACATACCTTT GGTCGCGACCGTTAACAGCTGGATCCACAAATGTCTTCTCTTCAATATCACCATTCAAAATGGTTGAGAG GGTGAACTTGGCCTGATTACCGGACTTAAGGGTGAATACCTTCTCTGCTTCTTTGGTTTCGAGGCTACGG ATAAAATCTGAGCTATCACTACCTAAAATGTTTCGCCCGCGAGCTACTATTTTTTTCTTCACGCTGATTG GCTCCTCAGGAATTCAATACGGTCAAACACAGCCTTCGTAAAATGCTCTGCTTCTGTACGCGCTTTTTTT AACGCGTTCGTTGCTACCGGGATAAGATGCTGGGTTGGCACTAATAATCGTATCAAACGTTTCTCCGCAA CGTTCAAAGCCATCCAGGCGGGGCAGGGAAGAGTCCAGTATGCTGCTTGTGTAGACTTCACGAGCAAGGC TATGTGAAACCAGATGATCGGGCTTGCCAGTCATTTTCGACATAAAACCAATACTGGCAGCCAGACGCGG TTCAATGCCTTCTTCTTCCAGCGTTTCCAGCATTTCAGGCAAGCGGGTAAGGTATTTCAACGTGGAATGG AAATCGACTTGCGCCGGCGGAGTAGGGGTGAGAATAAGGTCACTTGCCGCCAAACCGTTTAGTAAAAATG GATCGAGGTGCGGACCTGTATCAATCAGGATGAAATCGTAGTCATCAGCCACACGATCGATAATTATTTT GCGAAGCACTTCGTACTGGTTTACGCCCGGCAGGTGCTCGCTAACCAGCTCCTTCCATGCGCTGGCTACA AAACCATCATCAATAGAAGCAGGAATAACATCTACACCTGGAATGATGGTTGGCCGTATCACTTCGTTAC GCAGGGTTTCAGCATCGACATCGTTTAGCATCGCTTGCGCGGCGGTTTCAAGAATGGAACCAATACTGTG CGTGTGATCGAGGAACATGGTGCTGGATGCCTGCGGATCAAGGTCAATAACCAGAATACGCAGATCGTGA CGCAATAAATCCTGATGCACTCGCAACGCGTGCGCCAGCGTTACAGTTGATACGGTTTTGGATACGCCAC CTTTCAAGTTAACGACGAAAATAACGTAAGGCGATTGATGGATTTCACGATACTTCGGGATCTTGCGGTG GGCGTAAATATCAATAACATTCTGTACTGTAAGAGCATATTGCTCAACATTTCCGACGCGTTTCTTGTTG AAATCGTAGCCTGCATCTTCCATTTCTTTAATGGCCTGCTCCACGATGCGACGGCTTAGCTTGGGTAATT TGGCTACTGCGTTCCGGGTAAATGTCTGGAAGTATTCTGTAAGGTTAAACTCTTTGCGTTGATCTTCAAT GTCCCGGCTCATTGACTCAAGCAATATGCCAGCTCGTCGCGCTATCGAGCCTACTCCACCGTAATCTCGT TTCATTCTGTTCTCCATGATGTTTTCAATGTAGAGGACATTGATTGTACAGCTCGGAGTGTACAACAAAT ACCGTGACGTGCAAGAAATTATTGATATTGGTGTTTTTGTTGCACGTTCAGCGAGTGACTCAAAGGCTGA ACGCTGATACATGTGTTTATAAATCGGCTCGGAAGTGAGCAAACAGGTGTGTTTACAAAGCGGAAACAAT ATGAGAGGGAATAGATGTGTTTATAAAACGGATGCTGATGCTGTGTTACCGGGAAAACAGCAAACACTCG CAGTCACTGCGGCACATATCCGCTTTACAAACACAGTCAGGCGCTTTTACTCTCCATCTTTTAAGGCTTC AGACATAGCCTTAATGTCTGGCCTAGGCGTGCGACGGGTTATGATTAAGTGCCATTCACCATCCTTTTTA ACGACATCGCCATCTAAATAACCGACCGCTTTAAGCTCGTCTATAGCCTTGTTAATCACTCGATTCTGCT GGTTATTGGGTGAGGTAAGCATTAGGCGACGTTTAATACGCGCGAACGATAGTGGTATTGGTCGCTCAGG AAGGCTCTCAATGAAAGTGTATAGGGCCTGTGCTGTCCCTTTGTTCGCAAGTTGCCGGATTATAAACATC TGCAGAAGCACCTGACGGTCGAATTGATAAAGCTCCCAAAGAGACTCATCGGCGGTAAGTTCCATGATGT CGTCTTTTTCGTCCCACTTACCACGACTTAACAGACCAGATACAACACCATTCCGATCCTTTTCTGAGGC AAGCTTGATAGTTGTGCTGCGAAGACGAATAAGAGAGTCGGCCAAGCGCGTTCTGAGTCCTTTATCTTTG TCCTTTGAGCTAAACCCGCAGAATGTAGCAAACTCGCTGAATGGAAGTTCAATGGTGCTGCTGTTTAAGC CATATTTCGAAAACGCGAGAATGATGCCAACCCACACCTTGAAGTCAGTCTCCATCGAAAGTCGTGGGCC GGTAATACGGATGTCTGTATAACCTTCGGCTCTTGCCAACTCTAAGCTTTGAAGTTCGCTACTCGCATCA ATACTGATATTTTCTGTGTCCTTTCCTTTTCGTTTTAAGGAAGGTAGAAACAGACCTAAGCGCATCAAAG CTACAGGCTGGACAGTAGCGTTTCTGGAAGGCATGAGCTTCTTATTTTCATCGATTTCTACGAGAACCGA TTCAAGTGATAGATCTACACTTTTCTTATACATAAGGACTTATCCACAGTTAAAGGATCATCCACAGACA CAGCATGCGTAATCCCATTTATAAACACGCGCAATCCGTTTTATAAACACATATATCCGCTTTGTAAACA CAGAATACCGATTTACAAACACAAATATCCGACTTATAAACACATGAAATGGCTGTTAGCCTATGCATGG CGCGGTTTTCAACGTACCGGGATCTGTTTGGATCATTATATGGATCTTTGCTGGATCAGATATTTGGATC TGCCCGGTGGATAACTGGATAAGTTGTCCATTTAACTTCGAGCGTAAGCAGAATTTATCCGTGCAGTTCC CTGGTGCTTCCTCGCTCACTCGCGGGCTTCGCCCTGTCGTTCGGCTGCGGCGAGCACTACTGGCTCTCTC TGAAAAGCGAAATTTAACTGATCCTCGCTATGGGGATATCTTTCCAGCGGGTGGTGTACGCAGGGGAGAG CATGTCGCGTTTCATTTGCCATGATGGCGCTATCCCTCGTCCGGCAAACCAGAGCTGTCCCAGCCCGGAA TGATTAATGCCATCGAGAACCTTCATCAGCTCAGCGCTGTGAGGACGTGGAGGACGTTCGTCGAACAGCT GCAGCTGCGAAACACCGGAGCCGGTGAAGTCATTCAGCATCACACCGGCTTTGGCATACCGGTGCCCGTC CTTCCAGATACGCTCCAGAGCCGTTGTGGCGGCCGCAATGATGTCCCGGGTGTCCTGAGTGGGGGTAAGC AGTTTCTCCGTGGCCACGTTGCCATAGTAAGGCTCTTTAACGGCGAACGGAGACGTTTTGATGAATACGG AAATATGCCGGCAATACTGGCGCTCTTTACGCAGCTTTTCTGAGGCCCGCTCTGCGTACTGACAGACAGC CTGGCGGAGCGAATCGTACTCCGTGATTTTCTCTCCAAAACTGCGGCTGCAGACGATCTGCTGCTTTGTT GGCGGGGCTTCCTCAAGCGACATGCAGCTTTCCCCGTTCAGTTCGCGTACCGTTCGCTCAAGGACTACGG AGAAATTTTTGCGGATAAAGGCCGGGTTCGTCAGGGCCAGATCGAGCGCGGTTTTGATGCCCAGAACATT GAGCTTGCGTGCAATACGGTTTCCCACGCCCCAGATCTCTTCGACCGGCTGCAGTGAAAGCAGTTTCCGC GTTCGCTGTGGATTCCCCCGGGTGAGTGCGAGCACACCACGAAACTGTTTCCACTCCTTTGAGGCCCACT GGGCTGATTTTGCGAGGGTTTTCGTTGGTCCGGCGCCCACACCGATGGTCAGACGGGTACAGTCATACAC GTGCTGTCGCAGCTGCCGGCCGAAGTCCTCCAGGTCCATGCAGTGCTCCACACCGGTCAGATCGAGGAAC ATCTCGTCAATCGAATACTGTTCCACCCCCGGAGCCAGTTCCTCCAGGCAGCTCATCACGCGCGCCGACA TGGATGCATAAAGTTCATAGTTGCTGGAGAACGCGTATATTTTTTCCGGGTATCTTTCGTTTTTCATCTG AAACCACGGCGTACCCATTTTGATCCAGGGCTTTGCCTCGGCACTTCTCGCGATTACGCAGCCATCGTTA TTGCTGAGCACCACAACCGGCTTTCCTTTCAAATCCGGGCGGAAAACACGTTCGCAGCTGGCATAAAAGC TGTTCACATCGGCCAGGGCAAACATCAGTACATCTCCCTCGGGCGGTGGATGATGTGCGTGACGACGCCA AAGATATCCAGATCGTCCGGGTCGGGATAAATCGGCGACCAGGCGGCGTTCATGGGCTGCAGCGTCAGTC GTGGCGTCAGCAGCAACCGTTTGACCGTAAACTCCCCCTGCACGCTGGCCACAACAATATCGCCATGCCG GGGCTTCTCGGCACAGTCCACAACCAGCAGATCGCCATTGTAAAGGCTGCCGTCGGCCATACTGTCACCG CTGGCGCGAAGGTAGTAAGTCGCGCTCGGATGCCGTATGCAGTAATCATGGAGATCCAGGTCAGACTCGA CGTAGTCAGCTGCAGGGCTGGGAAAACCGCAGCTGGCCAGGTCTGCAAACAACGGATGGGCCTGTGGCGG GAGTTCTTTCCCGGTGCTGAAAAGCTGCAGTTTCATCTTTCCTCCTGATGTCTAAATATACTGGTTATGC ATACAGTATATTTAACAGCGTGAGGATAATCCAGATCGCCTGCGACATGAACAGTATGAGTAACATAAAT TACTCAAAATGCTCATTAATATCATTTTGATTCATCAGTTTTACTCATAATGAGAAATAAGGCTTTTATT TTTTCATTTTGCTCTTATAATATGTATCAAATTGAGTGTAATTGACGGAGCATAATGATGAATATTTACT GCGATGATGGTTCAACTAATGTTAAGCTGGCATGGTTTGAAGGAAACGAGCTGCAGACCCGGGTTTCTGC TAACTCCTTCCGGCATGGCTGGAAAGTGGCGGAATTCAGTGCTGCAACGTTCAACTATCAGGTGGGTACG CTGAAATACACCTGGGACAGCGTCAGCCGGGATGCCATCCCGACAACAAACGTGGAATATCAGTACGGTG ATCTCAACCTGCTGGCCGTGCATCATGCGCTGCTGAACAGCGGACTGGAGCCGCAGCCGGTGAGCCTGAC CGTGACGCTGCCCCTGAGTGAGTATTACGACGGGGACTGCCAGCGGAACGAGGAGAACATACGACGCAAA CGGGAAAACCTGATGCGTGAGCTGGTTCTGAATAAGGGCAGGGCATTTACCGTAACGGACGTGAAGGTGA TGCCGGAATCACTACCGGCGGCGTTCTCCCGTCTCGCGGAGCTGAAACCCGGCCCCGCTGAGACCACCCT GATTATCGATCTCGGTGGTACCACGCTCGATGCCGGTGTGATTGTCGGCCAGTTTGATGATATCAGTGCG GTGCACGGTAATCCGTCTGTCGGCGTGTCACAGGTCACCCGCGCAGCTGCAGGCGCGCTGCGTGCGGCAG ACAGCGAAACCAGCGCCCTCATCGCTGACACTGTCATCCGCAACCGCAATGATCGTCAGTATCTGCAGCG TGTGATCAACGATGCCGGTAAAATTGACGAGGTTCGGAACAAAATAACAGAGGCAATCACTTCCCTGGGG GCGCGTGTCACCAGTGAGCTGACGGCCTTCAGGAACGTTAACCGGGTATTCCTGGTCGGGGGAGGGGCTT CCCTCATAGAAGAAGCTATCCGTCAGGCCTGGCCTCTGGCTCATGACCGTATCGAGGTTATAGGCGATCC GCAGATGGCGCTGGCCAGGGAGATTGCCCTTTACAATAAAGAGGACTAAACGTGCCGGACGGCCAGTATT CTTTCTATCTGCACAGCGACGATCGCACCGACATCGCGGCGATGGCAACCATCAGCACCATCTCACAGCC CCTGCGCGGTGAGTTCATCCGTACCGCCGCCACCGCCGGGGCGGTGGTATACCAGGTGGATGCCCGTTTA CCGGCGCTGATCCCGGTGTTCTTTGCCGGGCAGCTGAGCGCTGTCCGCCTTTGCGCCGTGATGGCCCTGG TCTCCGGAACCTGGTCCTCACTCACCGGCCTTCCGGATGAGCCCGAAAATGGTGGGGCTGCTCTGCCCGT GTCACCGGAGACGGAATACCAGCGCCGGCGTTACACCCTGACGCTTCAGAATGGCCGGAGTGGAGAACGG GTGGAAAGTGTGCTGACGGAGGCGTCATCCCGTCTGCGTGGCGATCTGCTGAGAAACCTGATTATCACCG GTCTTGCCCTCCACACGACGGCACCGGAGCTGCCGCGCCTGCTGGCCAGTATGCCGGTACCGCCCACCTC GGTCAGTGAGCTGCAGGCACTGGTTCAGCAGATGGCCGGCACCGCTGACGTGAACAGGGCTGCAGCTGCA GTACCGGATACGCCGACAGCATCTGCCGCGCCGGTGTCCGGGTCGGATACCCGGGAAATAAAGAAAAATA TGCGGCGTGCATTCGGTGACTAACAACGAATCACATCCACTACTACACCGATTTCAAATGACAGGCATCC CAGGGAGGTTCTCATGTCACCAGGATTCAGAAATGTTCTCCGTCTCGCCCGCATTCCCGTCGACAGCAGT GAACCGGTGCGAAGAAAATTTGGCAGCCGGCTGATTGGCATTGTGACGGTATGTCTGCTTCCGCTTCTGG TTTTCGACGTTCCGCAGTGGGTTTTCATTTTGTCGCAGGTCATCTGGGGGGCTGGCGTCTATATTGGCCT GTCCCTGGCCGGGGATAAATCCCTGAACAGCTGATACAAACTTTCCGGTTGTTCAAAAAAAGAACAGGCG TGGTGGCGTCTGTTCTCCCGCGCTTCTCCGTCGTTTGCCTTCAGGTTATCCACAATTTTAAGCCCCGGAT TTGTGGACAGGTATGCCGGTAATTCCCCGTTCGCCTGGAGTTAACGCAAGCCTGCCGCCCCCTCAGACTA CAGGAGTGCTGCCATGTCCAGATTCATTCTCGGGAACTGTATTGATGTGATGCGCGGATTCCCCGACCGT GCCGTGGACCTTATTGTGACCGATCCGCCTTACCTCGTCGGTTTTAAGGACCGTCAGGGCAGACAGATTG CCGGGGATGTGACGGACGAATGGCTGCAACCGGCCACGCTGGAGATGTACCGCGTCCTTAAAAAAGACGC ACTGATGGTGAGCTTCTACAGCTGGAACCGTGTGGACCGCTTTATGGCCGCGTGGAAGGCGGCAGGATTC TATGCCGTGGGCCAGCTTGTGTTCACCAAAAACTATGCCTCCAACCGTCGTAACGCCAGGGCCCGACGCG GATTTGTGGACTACTGCCATGAAGGGGCTTATGTCCTTGCCAAAGGCCGCCCCGTGCCGCCCCTTAAACC GCTGCCGGATGTGCTGCCCTTCCCGTATACCGGTAATACCCTGCATCCGACGCAGAAACCGGTGGAGGCG CTACAGCCGCTGATTGAGTCATTCAGCGCCCCGGGCGCGATTGTTCTCGACCCGTTTGCCGGAAGCGGTT CGACCTGCGTCGCTGCATACCGTGCCGGACGCCGCTATATCGGCATCGAAATGCTGGCGCAGTACCACCG GGCCGGAACCGAACGACTGGCCGCCATGCACCGGGCCGTAAATACCCCGGCGGCGAACGATGAATGGCTC CCGGAGGCCGCGTAATGAATTACGACGGACACGAAGCCCTGCGCCGCGATATGGCCGGGCTGGCGAACAA TCTTTGCGACCTGAAAACCACCCTGAAAGTGCTGGAAGACACGTACCACTACCGGTACGACGGACTGGCG GAACGGCTTGCCGGTATCAGTCTGCGACGTCTCAGCGTCCTGATGGATGAGGCGTTCAATATTGCACTGA TGCTCGATGAAAGCTTTCTGGATTGAGGAGAGAACATGTACGGAACCCGTGAAGATCTTTGCAGGATGCT GAATGAGCAATATCCCGCAGAAACCCCGCTGAACCTGATTATCTGGACCCCGGCGGATATTGAAGCACTG GCTGACGGGATGGAATATTCCTTTTCAGAACATGACGTAAGGGCAGTACTGGAACGCATGGACACTATAC CGGAAGAACAACGGCTTGAGTCGGGCGTGTCAGCCGGCCTGGTGATGGCACTGATAGACCAGGTGAAAGA GAACGGGCAGAGGGTGACTGTGCCGGTTGACCTGCTTGAAACCCTGCTGATTACCGCCGAACAGGCATTG TGGGACAGGGAATGGACCGCACGGGATCGCAATCTCCCGGTGCCGGAAAGCGTAATGCGCCGCCTGGCGG ATACAGCAAAAGTGCGGGCATTACTGAAAAGCTGACAGCAGATCGCCCCGCCACGCGGCGGGGTGATATA ACCCGGACAGAGACGATAATGATGAAAAAAGAAACCCTTAACACGCTTATTCTGCGTCACGGCGACCGGA TGCTGCGCCAGGCTGGCTGGCCCGACACTGTTGATATGGCGCCCGTCGCCCCCGAAACCGTACCCGGCTG GCTTGCCGCCTGCGGCTCTCTCAGTGGCGTGGAAATCCTCACGCTTACGGAACAGCTTTGTCAGCCGCTG ACGTATGGCCGGGCAGCGTTGTTGCTCGCCAGCGCCCGGCGGCTGGCGGGAACCCCGGCTCGTCTGCATC TCTTTCCGGTGCAGGCATATCCGCATCCGGAGCGGCTGGCTGACTGTCAGGTTATCCGCCTGCCTTACGC TCAGGAGTGGCTGACAGCGGCGGAATGTGACGATCTGCTGGCCTTCCTGAAAGCCTCCCTCACGCAGATA TCGGAAATCGTCCACCGGGATACGAAGCGCATCGCCGCCGCGCTTACGCCGTCCGTCAATCCCCGTCTGA TGGACAGGCGGATCGGTGACTGGCGCTTGCTGGCCGTGGAGTATGATCATGATAACTGCCTGGACGAAGA CGAAACCGACAGGCTGGATCAGGTCCTCGATGCCATTCTGATTCGCGATGCGCGATTCTGCCCGGTCCTG CTCACCCTGGTTAACGAGCGGGAGGAAACTATCAGGAGCGCAGGGGTTATCGCTGATCAGCTGCGTTTTA CGGACACTCCGGTCCGGCGCTGGTTTGATCGCCGGGTTTTAAGGGAAATGGTGAGGGAGGCCCGCGCCAG CAGAACTCAGGAGTGACAGCCCGGCGCATCAGGGGAGGGGACCCTCCCTTGTCAGCTTGCCGGCACAGGA GGTGTGGTGCGATAAGGATGTCGCCGTGCCGGCTCCGCGTCCACCCGGCCCGGTTTCCGGGCCTTTTGGG TGAACACAACCCTCTGTTATCGCCGTGCCGTGTGCTGGCTTTGCCGTGCCTTCACTTTAGCCCGGCAGCC GCAGAGGCTGGAGTTCGCTGGCGCCGCCATCCCCGGATAAGGCAGTCGCCGGCTTGCCGTTGCCGCCGGC TCCGCTTCACCCGGCCCCATCCCTCCGGTCCGAGGCCTTATTACTGCGTCTGTCGCGTTGCGACATCTGC TTCCGCTTTTCTCCCGGTGGTCGAAAAACGGGGGAGAGAAACCCTGTATTCAACCTCCTGCATCGCGACG GGTTGTGCCGTGCCTTCACTTTAGCCCGGCCGCTGCAGATGCAAGGGTGCGCTGACGCCGCCATCCTCGC CCGGTCGCAGGTTTTTTATGATGCTCGCCGTTCTTCCCGTCGTTTTCTCGCTCAGGTTTCGCTCGAAAAC CGTCCAGACCAGCTTCGCGCTATATCTGCGCTGCGGCCTCCGGTGTCGCCCCTGCATCTTCCGCTTTTCG CCGGGCTGTCGTGTCGGCACGGCACAACCCGGTGCCGCAGTCTATGTGATTACGGAGGTTTATCCATGCA GTATGTGAATACATGCCCGGTCCTGAATGTTGAAGAGTGTGACCGCCTGTCTTTTATGCCGTACCTGTTC GGCACGGATTTCATGCTCGCGGAATTACAGGTGTACGCTCTGGCCAAAAAATGGATGCCCGGCTATGAGG GCGGCTTCTGGCATTTTATTCGCCTGCCGGAGGGGGGCGGCTACATGATGCCGGATTGTGGCCGGGTACA TCTGGTCAGTAGCGAAAACTGGTTTGATCGAACTGTCAGCGCCGACGCGGCGGGCATTATTCTGACCAGC CTGGCGATTAATCGCCGTCTGGCGGCCCATCATGACAGCAGTAACCCGGCGCTGACTCGCCTTTATATGC TGCGTGATGCCCAGCTCTGGAATCACATCACCTTTCACCCCGAATGCAGTGCTATTTACGCCGCGCTGGA CTGATTAACGACCGGGGCGGTTACACCGCCCCGCAGGGAGACAAAAATGACTTCATCAGTAACCGTTCCG GCCGTCTACGTGGGCACATATCACCAGTACAACGGCGGCAGTATTTTTGGCAAATGGTTTGATTTAACCG ACTTCGACGACGAAGACGAATTTTATGACGCCTGCCGGGCGTTGCATGCCGCCGAGGATGACCCCGAGTT TATGTTTCAGGACTGGGAAGGGATCCCGTCTCAGTTTGCCTCTGAATCCTCTGTTAAGTGGGCGTTTATC GAGGCATTCCTGCAGGCGCAGGACGAAGGACGCGCTGCCGCGTTTGTGGCCTGGGCGGACTATACCGGCG AGTGCGACTATGACGCCTTTGATGAGGCGTATTGTGGCGAGGCTGAAAGCGAGGAGGATTTTGCTTATGG CTTTGTGGAGGATCACGGCCTGTTAAACGAGGTGCCTGAATCCCTGCGCGTCTATTTCGATTATGAGGCT TACGCGCGGGATCTGTTCAGCAGCGGCTATGTCTTCCATGAAGGCTATGTATTCAGCAACTGA
Region Details
| Region | 1 |
| Region Length | 11.6Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | recombinase |
| Region Position | 1230-12912 |
| # tRNA | 0 |
| # Total Proteins | 14 |
| # Phage Hit Proteins | 10 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 85.7% |
| # Bacterial Proteins | 2 |
| Attachment Site | no |
| # Phage Species | 8 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(4) PHAGE_Salmon_SJ46_NC_031129(4) PHAGE_Entero_N15_NC_001901(3) PHAGE_Yersin_PY54_NC_005069(2) PHAGE_Cronob_ENT39118_NC_019934(2) PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2) PHAGE_Mycoba_UnionJack_NC_028802(1) PHAGE_Rhodoc_CosmicSans_NC_028677(1) PHAGE_Rhodoc_RGL3_NC_016650(1) PHAGE_Strept_phiARI0004_NC_031920(1) PHAGE_Rhodoc_RER2_NC_016653(1) PHAGE_Pseudo_YuA_NC_010116(1) PHAGE_Pseudo_MP1412_NC_018282(1) PHAGE_Mycoba_Theia_NC_028960(1) PHAGE_Entero_P88_NC_026014(1) PHAGE_Staphy_vB_SepS_SEP9_NC_023582(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Staphy_Stau2_NC_030933(1) PHAGE_Salmon_SSU5_NC_018843(1) PHAGE_Pseudo_M6_NC_007809(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 28.57% |
| GC % | 53.70% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NTHR01000122.1| Klebsiella pneumoniae strain BA11544 plasmid pIncFIB 14440, gc%: 52.98%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 14 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(1230..2201) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CK247_22200; phage(gi100010) | 9.86e-60 | Showinfo_outline |
| 2 | complement(2198..3404) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CK247_22205; phage(gi100009) | 2.22e-157 | Showinfo_outline |
| 3 | complement(3726..4622) | PHAGE_Entero_P1_NC_005856: RepA; CK247_22210; phage(gi46401683) | 9.11e-91 | Showinfo_outline |
| 4 | complement(5023..6294) | PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; CK247_22215; phage(gi431811050) | 0.0 | Showinfo_outline |
| 5 | complement(6294..6725) | PHAGE_Cronob_ENT39118_NC_019934: protein umuD; CK247_22220; phage(gi431811072) | 4.51e-35 | Showinfo_outline |
| 6 | 6957..7928 | PHAGE_Entero_P88_NC_026014: recombinase; CK247_22225; phage(gi744692717) | 4.49e-77 | Showinfo_outline |
| 7 | 7931..8602 | Mediator of plasmid stability; CK247_22230 | 0.0 | Showinfo_outline |
| 8 | 8663..8893 | hypothetical protein; CK247_22235 | 0.0 | Showinfo_outline |
| 9 | 9083..9784 | PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; CK247_22240; phage(gi100063) | 9.40e-28 | Showinfo_outline |
| 10 | 9784..10005 | PHAGE_Entero_N15_NC_001901: gp50; CK247_22245; phage(gi9630517) | 6.40e-06 | Showinfo_outline |
| 11 | 10015..10434 | DUF1380 domain-containing protein; CK247_22250 | 0.0 | Showinfo_outline |
| 12 | 10488..11255 | hypothetical protein; CK247_22255 | 0.0 | Showinfo_outline |
| 13 | 11935..12363 | PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; CK247_22260; phage(gi162135127) | 1.34e-12 | Showinfo_outline |
| 14 | 12406..12912 | PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; CK247_22265; phage(gi966199624) | 2.20e-12 | Showinfo_outline |
Sequence
>complement(1230..2201)
[Klebsiellapneumoniae]
Sequence
>complement(2198..3404)
[Klebsiellapneumoniae]
Sequence
>complement(3726..4622)
[Klebsiellapneumoniae]
Sequence
>complement(5023..6294)
[Klebsiellapneumoniae]
Sequence
>complement(6294..6725)
[Klebsiellapneumoniae]
Sequence
>6957..7928
[Klebsiellapneumoniae]
Sequence
>7931..8602
[Klebsiellapneumoniae]
Sequence
>8663..8893
[Klebsiellapneumoniae]
Sequence
>9083..9784
[Klebsiellapneumoniae]
Sequence
>9784..10005
[Klebsiellapneumoniae]
Sequence
>10015..10434
[Klebsiellapneumoniae]
Sequence
>10488..11255
[Klebsiellapneumoniae]
Sequence
>11935..12363
[Klebsiellapneumoniae]
Sequence
>12406..12912
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
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Length: 14440 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: CK247_22200 (Region 1)
Locus: CK247_22200ORF Start: 1230
ORF Stop: 2201
Strand: Backward
Protein Sequence: MKKKIVARGRNILGSDSSDFIRSLETKEAEKVFTLKSGNQAKFTLSTILNGDIEEKTFVDPAVNGRDQRYVTPESVSDITRTINLQQFFPAIGRVINGCIEVLDGSGAAACIFSGAKFEILVTEDEISLEDARQLAKDIQTAREHTLREIGQRYQFMYANGMSKDEIARVEDVSPASVSRAFQAASVPAEMVELFPVINELSLADYQLLLKISEDLDSKGVPLSDLLGKVQADISAAKVESVSKSLIMDSFKRHSKQLKPAPVKTVQTEKLREFEDKKQFARKKTDPSKRLVTYEFARLPASVQAELDKAIRLVMGNMQSFEK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22200, hypothetical protein, phage(gi100010), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 9.86e-60
Locus 2: CK247_22205 (Region 1)
Locus: CK247_22205ORF Start: 2198
ORF Stop: 3404
Strand: Backward
Protein Sequence: MKRDYGGVGSIARRAGILLESMSRDIEDQRKEFNLTEYFQTFTRNAVAKLPKLSRRIVEQAIKEMEDAGYDFNKKRVGNVEQYALTVQNVIDIYAHRKIPKYREIHQSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASSTMFLDHTHSIGSILETAAQAMLNDVDAETLRNEVIRPTIIPGVDVIPASIDDGFVASAWKELVSEHLPGVNQYEVLRKIIIDRVADDYDFILIDTGPHLDPFLLNGLAASDLILTPTPPAQVDFHSTLKYLTRLPEMLETLEEEGIEPRLAASIGFMSKMTGKPDHLVSHSLAREVYTSSILDSSLPRLDGFERCGETFDTIISANPASYPGSNERVKKSAYRSRAFYEGCVPYIPEEPISVA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22205, hypothetical protein, phage(gi100009), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 2.22e-157
Locus 3: CK247_22210 (Region 1)
Locus: CK247_22210ORF Start: 3726
ORF Stop: 4622
Strand: Backward
Protein Sequence: MYKKSVDLSLESVLVEIDENKKLMPSRNATVQPVALMRLGLFLPSLKRKGKDTENISIDASSELQSLELARAEGYTDIRITGPRLSMETDFKVWVGIILAFSKYGLNSSTIELPFSEFATFCGFSSKDKDKGLRTRLADSLIRLRSTTIKLASEKDRNGVVSGLLSRGKWDEKDDIMELTADESLWELYQFDRQVLLQMFIIRQLANKGTAQALYTFIESLPERPIPLSFARIKRRLMLTSPNNQQNRVINKAIDELKAVGYLDGDVVKKDGEWHLIITRRTPRPDIKAMSEALKDGE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22210, RepA, phage(gi46401683), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 9.11e-91
Locus 4: CK247_22215 (Region 1)
Locus: CK247_22215ORF Start: 5023
ORF Stop: 6294
Strand: Backward
Protein Sequence: MFALADVNSFYASCERVFRPDLKGKPVVVLSNNDGCVIARSAEAKPWIKMGTPWFQMKNERYPEKIYAFSSNYELYASMSARVMSCLEELAPGVEQYSIDEMFLDLTGVEHCMDLEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCMSLEEAPPTKQQIVCSRSFGEKITEYDSLRQAVCQYAERASEKLRKERQYCRHISVFIKTSPFAVKEPYYGNVATEKLLTPTQDTRDIIAAATTALERIWKDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMKVLDGINHSGLGQLWFAGRGIAPSWQMKRDMLSPAYTTRWKDIPIARIS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22215, DNA polymerase, phage(gi431811050), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 0.0
Locus 5: CK247_22220 (Region 1)
Locus: CK247_22220ORF Start: 6294
ORF Stop: 6725
Strand: Backward
Protein Sequence: MKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDCAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNAAWSPIYPDPDDLDIFGVVTHIIHRPREMY
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22220, protein umuD, phage(gi431811072), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 4.51e-35
Locus 6: CK247_22225 (Region 1)
Locus: CK247_22225ORF Start: 6957
ORF Stop: 7928
Strand: Forward
Protein Sequence: MNIYCDDGSTNVKLAWFEGNELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAHDRIEVIGDPQMALAREIALYNKED
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22225, recombinase, phage(gi744692717), PHAGE_Entero_P88_NC_026014
Homolog/Ortholog E-Value: 4.49e-77
Locus 7: CK247_22230 (Region 1)
Locus: CK247_22230ORF Start: 7931
ORF Stop: 8602
Strand: Forward
Protein Sequence: MPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGGAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPTASAAPVSGSDTREIKKNMRRAFGD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK247_22230, Mediator of plasmid stability
Homolog/Ortholog E-Value: N/A
Locus 8: CK247_22235 (Region 1)
Locus: CK247_22235ORF Start: 8663
ORF Stop: 8893
Strand: Forward
Protein Sequence: MSPGFRNVLRLARIPVDSSEPVRRKFGSRLIGIVTVCLLPLLVFDVPQWVFILSQVIWGAGVYIGLSLAGDKSLNS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22235, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: CK247_22240 (Region 1)
Locus: CK247_22240ORF Start: 9083
ORF Stop: 9784
Strand: Forward
Protein Sequence: MSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYSWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22240, hypothetical protein, phage(gi100063), PHAGE_Staphy_Stau2_NC_030933
Homolog/Ortholog E-Value: 9.40e-28
Locus 10: CK247_22245 (Region 1)
Locus: CK247_22245ORF Start: 9784
ORF Stop: 10005
Strand: Forward
Protein Sequence: MNYDGHEALRRDMAGLANNLCDLKTTLKVLEDTYHYRYDGLAERLAGISLRRLSVLMDEAFNIALMLDESFLD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22245, gp50, phage(gi9630517), PHAGE_Entero_N15_NC_001901
Homolog/Ortholog E-Value: 6.40e-06
Locus 11: CK247_22250 (Region 1)
Locus: CK247_22250ORF Start: 10015
ORF Stop: 10434
Strand: Forward
Protein Sequence: MYGTREDLCRMLNEQYPAETPLNLIIWTPADIEALADGMEYSFSEHDVRAVLERMDTIPEEQRLESGVSAGLVMALIDQVKENGQRVTVPVDLLETLLITAEQALWDREWTARDRNLPVPESVMRRLADTAKVRALLKS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK247_22250, DUF1380 domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 12: CK247_22255 (Region 1)
Locus: CK247_22255ORF Start: 10488
ORF Stop: 11255
Strand: Forward
Protein Sequence: MMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVNPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWFDRRVLREMVREARASRTQE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22255, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: CK247_22260 (Region 1)
Locus: CK247_22260ORF Start: 11935
ORF Stop: 12363
Strand: Forward
Protein Sequence: MQYVNTCPVLNVEECDRLSFMPYLFGTDFMLAELQVYALAKKWMPGYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAAHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK247_22260, hypothetical protein, phage(gi162135127), PHAGE_Pseudo_YuA_NC_010116
Homolog/Ortholog E-Value: 1.34e-12
Locus 14: CK247_22265 (Region 1)
Locus: CK247_22265ORF Start: 12406
ORF Stop: 12912
Strand: Forward
Protein Sequence: MTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFLQAQDEGRAAAFVAWADYTGECDYDAFDEAYCGEAESEEDFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK247_22265, ArdA, phage(gi966199624), PHAGE_Rhodoc_CosmicSans_NC_028677
Homolog/Ortholog E-Value: 2.20e-12
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download