Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1274261471 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1274261471.PHASTER.zip
gi|00000000|ref|NZ_NPJW01000035.1| Klebsiella pneumoniae strain SCPM-O-B-7954 (KPB-417/16) map 27570, gc%: 48.81%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 11.6Kb | incomplete | 40 | 10 | 4251-15924 info_outline | PHAGE_Salmon_SJ46_NC_031129(4) | 52.45% | Show info_outline |
Region DNA
>1 4251-15924 CTATATGTCGTCCAGATGATTACGCATAAAGCTTACCATGGCTTTTTCACTGGCAAGATATCCACGGATA TAACGGAAGACCATCTTTGGATCAGACCAGTTCCCCATCTCGGTAATCTTTTCCAGGGAGTACCCGGCCT TAAACAGCTCTATGGCTCCCCCCACACGCACACTGTGTCCTGTCCATGTCCGGTACCGCCCGGACTGTCG GTTACTGTCGCCGACCTTCCCGGCAATCCCCCAGAGGCGTGCAAATGCCTGGTTCAGTGAATTAGAGGAC AGCATACCAACATCTTCCCGTGATACCTTTGATTCATTCTGTAGCTGCGTCAGTAACCCCTCACTGAATC CTGCTTTGACCAGCATCCTGTCTATGGATTTTCCCCGCGATAGCTTACTGCTGGTGGACGGGAAATATCG GTTTGTATGGATGTTTACAGGCTGAAAAAGAAAACGGTGCCCGAAGGTTTCGGTATCGGTGTATTCCACC GTCTCAATCAACCGTCTGACATGCTGACTGCATTGTGGTGAGAGCTGAAATGTCAGGTTACTTGAAAGGC TTGTCTTGGTCCGCATGACGTCCAGAAGGTAACAGGACGTGTCATTTTGCCATTTCAGGTCGCCGGTTTT AATCCTTCGAATTTCCACGTTACGCAGCAGGGTTTCAAACCCAACCCATATCATTGCAAGGTCCCGTATG TCTCTCAGGTCGTCGCTTTTATGCAGCGACCGGCGAAGAATATTGAGATCGGATATAAGAAATGGAAGGG CCTGACCGGTGACGATTTTTTTCTCATTCTCCCGCGCCCGCCATACCTGAACCAGTGCTTTTATCAGAAC GTTGCGGAAGTCTGGAAAACCCAGGCTGCTGTTAACGCTTGAAAGGCATGCAATAAAATGAGAGATAGTC GCCATTTTAACGGATCCATTCAGCCCATTAATATAGCGCTCGACATCAACCGCTGTGACCGGGAAGGGGG TCAGACCGTGCCTGGCGCACCATGCAGACCAGACACTCGTGACCCTTAACTGACTTCTGGCCGTATTGTA CCGGCGAAACCGCAAGAGCTTGAGTGCATCCAGAGCGCTCATGTCATCGGTTCGTGAGATAGCAACCAGT TTGGTTTTATCTGTCATGGGAAGATCTCATGTCTTTTCACTGATACTGTTTTTATAACCAGTATAGTAAC ATTGTTTTTTTTCAAATCCAGGCAGAACGTGAATTAATCAAATGGCTTCTCTTGCCTGTGCGTGGAACTT CGTTTACTGTTTTCGAAAATAGCCAGTGTTTTTGAACATGCCCCGGAGCGTCGTTGTTGAAAAGCCCAAA TGCGCACAGTAGCCTGAGAGAAACCTATCTCCTGAAGTTCAGAAAGTGCAGTACGACTGAAACCCTTGAC CGAGTGTTTGAGCGTATCCTGGATAAATTAAATGATGAAGGTGGGGATATAAATAAGATAACCAGCCTGA ACGGAGCTTATGATCACCGCAGGGCTGAGATCTACATGAAAAAAAACTATGACAAAATACCTGCTTCCGT GTGGCATCTCATCCCCGATGAGATATGAATAATGTAATTAGACGCTGTTATTCCAGGTTTGATAAAAACG GATGATGTAGAATTCCTTTACTCATTTTTAACGAGGAATATACATGCGACGTAATGCACAAAAATGGATC CCGTTTGGATTTGATACGGATTCAAATAAAATTGTTGATATCGCCAGCGTTGAAAATGGGCTTTCGTGTA ACTGTATCTGCCTCATCTGTGGGACCTCCCTGATTGCCAGGCAGGGTCAAAATAAAAAATGGCATTTTAG CCACAGCACAGAAGTAAAAGGGGTTTGTAGTGAGCTCACACTACAACATATAAAAAAATACATAAAGGTG AAAATACAGGAAAAAAAATACCTTGCTCTCCCTCATCTTCTGCAGGGTAAGGAGAAAGGGATAGTTAACC TCAAAAATCTCGCTGGTGGTGGGATTGTTTGTGGCCTTAATGCTGACCTCACAGGGATATGTAACGATAC GATAATCGGGATATTTATTAATGATACGTCGGAGGATATCCAGCCCAATCCAGACCTGTTAGCGCAAACA GACCAGCTGGCGCTGGTGGAGATCGATGCCGTTCGGATTGAAAGTATCATCGCTCCATATCGTGAGAATG GGGAAGGCATAAAGATGATGGATGCGATAGAAAAGTTACTTTTCGTTTCTGAGGAAGCGAAAAAATGGAT CTACCATCCTATGATGAAGAAGGTTAAACACCATACTTTACACCAGTACCGGCGTGAGCTGTCTACCAGT GGAAATCAGATCCTTGCTTTAATTCCTCATGAACTTCCGATAAGCATGAACGCTCTCCCATCCTCCCCGG CACAGCAGTGGCATCACCTTCGAGCCACGATTAACCTTCTTTGTCGCCTGAGCCGTTCTGATATCCCTCA AGGCAGTATTGCCTTTGAAGAACTGGTTTATTATATCCCCCGGCTTCTGGAAGCATCTGAATCTATCAAT GTTGCCGCTTACGAACGATGGTATGACTTCTATATACGCAAAAAAGGAGAGGGTGTACTGAATGAGGCTG AAATTGAATTTTTGTCTTTTATAGTGAAAATCATTAACTGGAACTTGTCCATACATAACCTTCCCACCTT CGATAGCAAGCAGGCCTTTCGGGATTGGTTTTTGCTAAATGATCCTAACAAGTCGCTATAGATCAATCTG TTTCTGCCCCGGGTTAAACCGGGCCTCCTGTACCGCTGGATGTGTGCTGTTTGGTTAAAATTCTTTTCAT GCCAGCCGGGCGTATATCACGCTGCAGCAGGTCACGGCGATTTTAATGTCGACTGTAGTCGCTGGTAGTG TCAAAGCTGGCGGGTAAACGGGGTCGGTGGAGGGGAATCATTCTCAACGCTGGCGGGTAAACGGATCCGC TGCCGGTGCTCATCCTCAACGCTGGCGGGTAAACGGGACCGCTGCCGGTGCTCATCCTCAACGCTGGCGG GTAAGCGGGGCCGCTGCCGGTGCTCATCCTCAACGCTGGCGGGTAAACAGGGGCGATACCAGTGACCATC CTCAACGCTGACGGGTAAGCGTGGTCGCTGCTGGTGGTCATCTTCAACGCTGGCGGGTAAACAGGGCGCT GCTGGTGTAAAGCCTCATTCCTGGAGGGTAATTACCTGGTTCGGTTTGCTGCGTTAGCTAAAAACCCGAA CTCTTAAAATTACACTCTGGAGTCAGTGTGTAATGTAAATGACTGATTTTACCTAAATAACTCAGGTAAC TTTTTTGTTTCGACTAAGAATGACCAGTACATAATCCCCACGATTTTTTTCTATCGTGTATTTTAAAAAA CCAGCTTCATCCAGTTGCTCTAACGCTTTTTTTATCGTCGCATTCTGAGCACCTTTGTGTGAAGTCAGCT GCAACCGTTCTCTTAAGCGGTCGAATCCAATGCGATAAAAATGGTCAGGTAATTCAACTAGATAAAGATA CAGTGCCTGGGCTGATTCTTTTCGAGACAGGGTCTTCAATATTTTTAAGTAAAGTCGGGTCTTCCCGTCG ACACGATACAGAGTATTCAAATCCGGATTTGGCCTGATAATGACCTCATCGGTTCCCTCATCATAGTAAG AAGTAGACACCAGGCTCATGTCGATCTTTACTTTTTTCCCTTCTACTGTTGAGTTTTTGATGAACTGGAA ATGGGTGTGCTGGATCCGTGTCAGTGAGTCGCTAAAACGTTTCCTTAACCTTGAATCAACTCGTTTTGTA GCAAGCCCACAACTGAAAGCAAAATCAATAAAATTGACCCTAACAGTCCCATCAGGCTCAAGAAATGTGT TGGCGAGTGTGTCCACGATCCCTAGCCAGACTTTGAAATCCGTATCCATATCAAGCCTGGGCCCAAAAAT ACTAATCTTTTCGTACCCCTCTCCAGCGATAGAAGAAAGACGACACAACTCAGTCGTTGCATCGATGACA TGACCTCGTGCCATAGGGTCACTGCCATCCTTGACTGTCGGAACAAAGACCCCCAATCGCAGTAGCGATT TGGGTTGAATACTCTGTTTTGAGTTAGGAACCAAATGTATAACTTCACCAGAACTTTTATCTTGCTCAGT GATGATTAGCGCTAACTGATTGTTATCATTGGCCATTTTATAAAATCCCGGATGTGGATATTTTTACCAG ATTACCCGCTGGCGTTGATAAAATCTACCCTCTGGCGATGATAATTGCCCCGTTAGCGTTGATGGTATAC CCTCTGGCGATGATGGTTCACCCGCCAGCAATGATAGAATACCCGCCAGCGTTGACAGAGATGGCCTGAG AGGCCCGTAGTTCAAGGCCTCACTAAAACGTTATTCTTTTATTAGTCCTTTTTGTCCTTTACTTAGCTTT AGTTAAGCTTCTGTTATTATTCTAAGCTGTGGATAAACACCATCATCAATAGTCAACAATCCGGGCAAGA CAGAATCACCAGACAGCAAGGGAGAAACTTACCAGAAGCCGGTCAGACACTGTTTGAAACCGGCCGAAGC ACCGCCTGAAACCAACCCATTCTTTCTCCATACGACGCTGCAACTGTTTCAGTTCGATCGTTGTTCACTC CTCTACCCGGCATGCAGTATGCAGTGACAAACTGAATTCGTCTGGCCCGACAATAAATTCACCAGCACGC TGTTGGCTGACATTACCATGCTGCCATTTGCCGAAACTGAATCACCCTATCGTTAAGGTTCGCGACTGAG CAGATAGTTCAGAGGAGGGGAGACAGGCATCGTTTGATACTCTTGGGGTCGTCTCAGAAAACGGAATCTA TGGTCACTCCCGTTTTTGCAACACCGATTTTGACGATAAATTGGCTTGCTTGAATCTATCCGGCGTCTGA ATGGGATTTTATTCCCGCGCCTCGATGAGTTCCGCGCCTGATGAACCTCCAGAAAATATACGGCTTCAAT GAGCCTTTCCGTTTTACAGGTTCCTCAACAGGCCGGTGGGCCGTTAGTATCATCAATATCAGTATTCGCA AAACCAGATCAGTGATTCTTTAAACCGGTGTATTTCTGCCGTTATGCTACATAAGTTTGCTGTCGTGCCG TTAGGGCCCAGGCTATTCTGGCCAGCTTGTTTGCCAGAGCACAAGTGACGACAAAGTTGCTTTTCCTACA CAGTAGATCCCTGACCCAATCGGCCAATTTGCCAGACTGGTGTTCCAGTTTTTGTATGAATACCCTGGCA CATTGAACCAACAAAGTTCGGATCTTTTTGTTACCTCGCTTACTAATTCCCAGCAATGTCGTCCGACCTC CCGTGCTGTACTGTCGAGGCACTAGCCCTGTTGCCGCCGCAAAGTCACGACTGCTGGCGTACTGCTTCCC GTCGCCAATCTCAGTTGAAATAGTACTCGCTGTCAGTGTTCCGACGCAGGGAATGCTCAGCAAGCGCTGT CCAATCTCATCTTCGTCCAACTTTCGTTTCAACTGGGATTCCAAATCTTTAATCTGCTCAACAAGATAGT GATAATGCTGTTGTAATTTCAGCAATAACTGGCTGAGGTATAGAGGCAAACTATTGTCCTCAAGAAGGGT ACTCAGTCGGCTAATAACGGCAGCTCCTCGTGGAACGCTGATGCCAAATTCCAGCAGAAAAGCATGCATC TGATTGGTTGTTTTTACCTTATCCTGAACCAAGGATTCACGGACACGATGCAGCGCACGCATTGCCTGCT GAGATTCAGTTCTGGGCTGTACAAAACGCATAGACGGACGCGATGCAGCTTCACAAATAGCTTCGGCGTC GACAAAGTCGTTTTTGTTACTTTTAACGAATGGACGGACAAATTGTGGTGATATCAGCTTAGGAAAATGC CCCAACTCTTCCAACTTGCGTGCCATAAAGTGAGAGCCACCACAGGCTTCCATTGCGATGGTTGTAGCGG GGCATGTCGCCAAAAATTCGATTAACTTTGGCCGTGTAAATTTTTTACGGTAAACAGCCTTGCCGCGACG ATCCTGGCAATGAATATGGAAAGAGTTTTTACCCAGATCGATACCAATGAGCGCAATGTTTTCCATGATA GTTCTCCGAATGAAAGCCTATCCTCAGCATAGTACCGGGAAGGAGGGAGTGACCATCTCATTAAATAAAG CACGCTAAGCCGGTGGCAGCGGTCGCAATGGCCTAAACTTCCCCGCACCGACCTTGGCGCTGCTGCGCCA TAGGTAATCGCCGGTCAGGTTGATGTGCTCCCACCCCAGCGGCGACAGATATTGCAACAATGTGTCGTCC AGCGCCGTGCCGTTGCCACGCAAAGCACTGGTGGCACGCTCCAGATATACCGTGTTCCACAACACGATGG CCGCCGTCACCAGATTGAGGCCGCTGGCCCGGTAGCGCTGCTGCTCAAAACTGCGGTCGCGGATTTCACC CAATCGGTAGAAGAAGACCGCCCTGGCCAGCGCGTTGCGCGCCTCGCCCTTATTCAGCCCCGCATGGACG CGGCGGCGCAGCTCCACGCTTTGCAGCCAATCCAAAATGAACAGCGTGCGCTCGATGCGCCCCAGCTCGC GCAACGCCACGGCCAAGCCGTTCTGGCGCGGGTAGCTGCCGAGTTTGCGCAGCATCAGCGAAGCCGTTAC CGTGCCTTGCTTGATGGAGGTGGCCAGCCGCAGAATTTCATCCCAATGGGCGCGTATTTGCTTGATGTTC AGCCTGTCGCTGCTAATCATCGGCTTGAGCGCGTCATAGGCGGCATCGCCCTTGGGGATGAATAGCTTGG TTTCGCCCAAGTCACGGATACGCGGCGCGAAGCGAAATCCCAGCAAATGCATCAAGCCAAACACGTGATC GGTGAAGCCTGCCGTGTCGGTGTAGTGTTCCTCGATGCGCAAGTCCGACTCGTGGTACAGCAGGCCATCA AGCACGTAAGTTGAATCACGAATGCCCACGTTGACCACCTTGGCACTGAAGGGCGCGTACTGGTCGGAGA TATGGGTGTAGAAAGTCCGTCCTGGACTGCTTCCATACTTCGGGTTGATATGACCAGTGCTTTCTGCTTT GCTGCCGGTTCTGAAGTTCTGGCCGTCCGACGATGACGTGGTGCCGTCACCCCAGTTGCCGGCGAAGGGT TGCCGAAACTGCGCATTCACCAGCTCGGCCAGCGCCGTCGAATAGGTTTCATCGCGGATGTGCCAGGCTT GCAGCCAAGACAGCTTGGCGTAGGTGGTGCCAGGGCAGGACTCGGCCATTTTGGTCAGACCCAGGTTGAT CGCGTCGGCCAGGATCGTCGTCAACAGCAAGGTTTTGTCCTTGGCCGTGTCGCTGGTCTTCAGGTGTGTG AAGTGGCGGGTGAAGCCCGTCCATTCATCGACCTCCATCAGCAACTCGGTGATTTTGAGGTGCGGCAGCA GCATAGCTGTCTGGTCGATCATGGCTTGCGCGGCGTCTGGTACTGCCGCGTCCAGCGGCGTGATCTTCAG GCCTGACGCGGTGGTGATGATGGCATCCGGTAAGTCGTTGGCCGCAGCCATGCGGTTGACTGTGGCGAGT TGCGCCTCCAACAATTCCAACCGGTCATGCAGGTATTGGTCGCAGTCGGTGGCCACTGCCAGCGGCAATT CGCTGGCCAGCTTCAAAGTGGCGAACTTCTCGACCGGCACCAGGTATTCGTCGAAGTCCTTGAACTGGCG AGAACCCTGCACCCAGACATCACCGGAGCGCAGCGCGTTCTTCAGCTCCGACAGGGCGCATAACTCGTAG TAACGCCGGTCGATGCCGTCGTCGGTCAGAACCAGCTTTGCCCAGCGCGGCTTGATGAATGCGGTTGGCG CATCGGCGGGCACCTTGCGCGCGCTGTCGCTGTTCATGCCGCGCAGCATGTCGATGGCATCGAGCACACC CTTGGCGGCGGGCGCAGCCCGCAATTTGAGCACGCCCAGGAACTGCGGCGCGTAGCGGCGTAGCGTGGCA TAGCTTTCACCGATGTGGTGCAGGAAATCAAAGTCGGCAGGCCGCGCCAATGTTTGCGCTTCGGTGACGC TGGCGGCGAAGGTGTCCCAGGGCATAACGGCCTCGATGGCGGCGAACGGATCGCTGCCGCTTTGCTTGGC CTCAATCAACGCTTGACCGATGCGCCCATACATCCGCACCTTGTCGTTGATCGCCTTGCCGGAAGCCTGG AACTGCTGCTGATGCTTGTTCTTGGCCGCGTTGAACAGCTTGCCGATGATGCGATCGTGAAGGTCGATGA TTTCATCGGTGACGGTGGCCATGCCTTCGATGGCCAGCGCTACCAGCGTGGCATAGCGTCGTTGCACCTC GAACTTTGCCAGATCAGCAGGCGTCATCTGGCCACCTTCACGAGCGATTTTGAGCAGGCGGTTCTGGTGA ACCTGCCGCTCGATGCCTGCGGGCAGATCAAGTGCTTGCCAGGATTTCAGGCGCTCAATATGTTCGAGCA TGTGGCGAGAGTTCGGTTTGGCAGGCGACTGGCGCAGCCATGCCAGCCACGTCACTTTACTGCCGTCCTT GCGCTTGAGAAGTTCGTCCAGGCGCTGACGGTGGGGTGATAACAAAGAATCGGTCAGCGCCGCGTAAATG CGTCGGTTGGCACGGGTGATGGCCTCGGCGCTTGCGCGCTCGATGGCATTCATGGCGGGCAGGATAATGC TCTGCCGCCGCAGATTCTCGACAAGTGCGCTCGCCAGCACGATGCCTTTGTCGGTCTGCAAGGCCAGCTC GGTCAATGTATGCACGGCTTGCCGATAGTGGCTCATGGTGAAGGGCTTGAACCCAAAAACCGTTTGCAGC TCGACCAAGTGCTCCCGCCGTGTCTGTTCGCGCTGGCCGTACTCGCTCCAACTTTCCACTGGCATCTTGA GTTGCGCGGCCACCATGCGCAACAGGGGCGGAAACGGAGGCTCATCGACGCCCAAAAAGGTGCCAGGGAA TCGCAAGTAGCAAAGCTGCACAGCGAAGCCCAATCGATTCGCGGCGCCGCGACGCTGACGGATCACCGAC AGGTCGGTTTCGTTGAACGTGTAGTGCCGTATCAGTTCGTCTTTGGCATCTGGCAGTGCCAGCAGGCTTT CGCGCTCGGTGGCGGACAGGATTGAGCGGCGTGGCATGGTCAGTCTTCCCGCAGGTACTGGTACAAGGTT TCGCGGCTGATGCCGAAGTCACGGGCCACCAAGGTTTTTTGGTCGCCTGCCGCAACTCGCCGTTTCAACT CGGCAATTTGTTCGCTGTTCAGCGATTTCTTTCGTCCCCGGTAGGCACCGCGCTGCTTGGCCAGCACGAT TCCCTCGCGCTGACGTTCGCGGATCAGGGCGCGCTCGAACTCAGCGAAGGCTCCCATGACCGACAGCATC AGATTGGCCATCGGTGAGTCCTCGCCGGTGAACTTCAGCCCTTCTTTGACGAACTCCATGCGCACGCCCC GTTGTGTCAGCCCTTGGACGATGCGGCGCAGGTCATCAAGGTTGCGTGCCAGCCTGTCCATGCTATGCAC CACCACGGTGTCGCCCTCGCGGACGAAGGCCAGCAGCCTTTCCAGCTCGGGACGCTGGGTGTCCTTGCCA GAAGCCTTGTCGGTGAACACCCGCGCCACCTGAACACCCTCCAATTGCCGTTCCGGGTTCTGGTCGAAGC TGCTGACGCGGACATAGCCGATGCGTTGACCTTGCAAGATGCCTCCAAAGGCAAAAGTGTCAGGATGAAA TCTATTACCTTTGACGGAATATGTCAATCAATAGGAAATTTAACTCTATTCTGACATCGTTTGCACATGG CATCTGACATCAAGTTTGTCGTTTTCAGAAGACGGCTGCACTGAACGTCAGAAGCCGACTGCACTATAGC AGCGGAGGGGTTGGATCCATCAGGCAACGACGGGCTGCTGCCGGCCATCAGCGGACGCAGGGAGGACTTT CCGCAACCGGCCGTTCGATGCGGCACCGATGGCCTTCGCGCAGGGGTAGTGAATCCGCCAGGATTGACTT GCGCTGCCCTACCTCTCACTAGTGAGGGGCGGCAGCGCATCAAGCGGTGAGCGCACTCCGGCACCGCCAA CTTTCAGCACATGCGTGTAAATCATCGTCGTAGAGACGTCGGAATGGCCGAGCAGATCCTGCACGGTTCG AATGTCGTAACCGCTGCGGAGCAAGGCCGTCGCGAACGAGTGGCGGAGGGTGTGCGGTGTGGCGGGCTTC GTGATGCCTGCTTGTTCTACGGCACGTTTGAAGGCGCGCTGAAAGGTCTGGTCATACATGTGATGGCGAC GCACGACACCGCTCCGTGGATCGGTCGAATGCGTGTGCTGCGCAAAAACCCAGAACCACGGCCAGGAATG CCCGGCGCGCGGATACTTCCGCTCAAGGGCGTCGGGAAGCGCAACGCCGCTGCGGCCCTCGGCCTGGTCC TTCAGCCACCATGCCCGTGCACGCGACAGCTGCTCGCGCAGGCTGGGTGCCAAGCTCTCGGGTAACATCA AGGCCCGATCCTTGGAGCCCTTGCCCTCCCGCACGATGATCGTGCCGTGATCGAAATCCAGATCCTTGAC CCGCAGTTGCAAACCCTCACTGATCCGCATGCCCGTTCCATACAGAAGCTGGGCGAACAAACGATGCTCG CCTTCCAGAAAACCGAGGATGCGAACCACTTCATCCGGGGTCAGCACCACCGGCAAGCGCCGCGACGGCC GAGGTCTTCCGATCTCCTGAAGCCAGGGCAGATCCGTGCACAGCACCTTGCCGTAGAAGAACAGCAAGGC CGCCAATGCCTGACGATGCGTGGAGACCGAAACCTTGCGCTCGTTCGCCAGCCAGGACAGAAATGCCTCG ACTTCGCTGCTGCCCAAGGTTGCCGGGTGACGCACACCGTGGAAACGGATGAAGGCACGAACCCAGTGGA CATAAGCCTGTTCGGTTCGTAAGCTGTAATGCAAGTAGCGTATGCGCTCACGCAACTGGTCCAGAACCTT GACCGAACGCAGCGGTGGTAACGGCGCAGTGGCGGTTTTCATGGCTTGTTATGACTGTTTTTTTGTACAG TCTATGCCTCGGGCATCCAAGCAGCAAGCGCGTTACGCCGTGGGTCGATGTTTGATGTTATGGAGCAGCA ACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTTAGCCATATGAACTCGGAATCAGTACGCATT TATCTCGTTGCTGCGATGGGAGCCAATCGGGTTATTGGCAATGGTCCTAATATCCCCTGGAAAATTCCGG GTGAGCAGAAGATTTTTCGCAGACTCACTGAGGGAAAAGTCGTTGTCATGGGGCGAAAGACCTTTGAGTC TATCGGCAAGCCTCTACCGAACCGTCACACATTGGTAATCTCACGCCAAGCTAACTACCGCGCCACTGGC TGCGTAGTTGTTTCAACGCTGTCGCACGCTATCGCTTTGGCATCCGAACTCGGCAATGAACTCTACGTCG CGGGCGGAGCTGAGATATACACTCTGGCACTACCTCACGCCCACGGCGTGTTTCTATCTGAGGTACATCA AACCTTCGAGGGTGACGCCTTCTTCCCAATGCTCAACGAAACAGAATTCGAGCTTGTCTCAACCGAAACC ATTCAAGCTGTAATTCCGTACACCCACTCCGTTTATGCGCGTCGAAACGGCTAA
Region Details
| Region | 1 |
| Region Length | 11.6Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | transposase,head |
| Region Position | 4251-15924 |
| # tRNA | 0 |
| # Total Proteins | 10 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 80% |
| # Bacterial Proteins | 2 |
| Attachment Site | no |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Salmon_SJ46_NC_031129(4) PHAGE_Entero_P1_NC_005856(2) PHAGE_Ralsto_RSL2_NC_028950(1) PHAGE_Bacill_Bobb_NC_024792(1) PHAGE_Mycoba_Shipwreck_NC_031261(1) PHAGE_Mycoba_Butters_NC_021061(1) PHAGE_Sodali_phiSG1_NC_007902(1) PHAGE_Ralsto_RSF1_NC_028899(1) PHAGE_Mycoba_Charlie_NC_023729(1) PHAGE_Bacill_Bp8p_C_NC_029121(1) PHAGE_Vibrio_PWH3a_P1_NC_020863(1) PHAGE_Salmon_SSU5_NC_018843(1) PHAGE_Bacill_phiAGATE_NC_020081(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) |
| First Most Common Phage # | 4 |
| First Most Common Phage % | 40% |
| GC % | 52.45% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_NPJW01000035.1| Klebsiella pneumoniae strain SCPM-O-B-7954 (KPB-417/16) map 27570, gc%: 48.81%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 10 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(4251..5387) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CIT20_RS26725; phage(gi100071) | 4.59e-23 | Showinfo_outline |
| 2 | 5564..5818 | transcriptional regulator; CIT20_RS26730 | 0.0 | Showinfo_outline |
| 3 | 5904..6971 | hypothetical protein; CIT20_RS26735 | 0.0 | Showinfo_outline |
| 4 | complement(7532..8416) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CIT20_RS26740; phage(gi100007) | 9.72e-57 | Showinfo_outline |
| 5 | complement(9332..10336) | PROPHAGE_Shewan_MR-1: IS110 family transposase; CIT20_RS26745; phage(gi24375433) | 1.28e-58 | Showinfo_outline |
| 6 | complement(10415..13387) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CIT20_RS26750; phage(gi100060) | 0.0 | Showinfo_outline |
| 7 | complement(13390..13947) | PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; CIT20_RS26755; phage(gi100061) | 6.01e-65 | Showinfo_outline |
| 8 | complement(13985..14330) | transposase; CIT20_RS26760 | 0.0 | Showinfo_outline |
| 9 | complement(14269..15282) | PHAGE_Mycoba_Shipwreck_NC_031261: hypothetical protein; CIT20_RS26765; phage(gi100032) | 1.61e-11 | Showinfo_outline |
| 10 | 15427..15924 | PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; CIT20_RS26770; phage(gi985761486) | 1.16e-33 | Showinfo_outline |
Sequence
>complement(4251..5387)
[Klebsiellapneumoniae]
Sequence
>5564..5818
[Klebsiellapneumoniae]
Sequence
>5904..6971
[Klebsiellapneumoniae]
Sequence
>complement(7532..8416)
[Klebsiellapneumoniae]
Sequence
>complement(9332..10336)
[Klebsiellapneumoniae]
Sequence
>complement(10415..13387)
[Klebsiellapneumoniae]
Sequence
>complement(13390..13947)
[Klebsiellapneumoniae]
Sequence
>complement(13985..14330)
[Klebsiellapneumoniae]
Sequence
>complement(14269..15282)
[Klebsiellapneumoniae]
Sequence
>15427..15924
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 27570 bps
Phages: 1
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Click on a region in the genome above to show details here.
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Locus 1: CIT20_RS26725 (Region 1)
Locus: CIT20_RS26725ORF Start: 4251
ORF Stop: 5387
Strand: Backward
Protein Sequence: MTDKTKLVAISRTDDMSALDALKLLRFRRYNTARSQLRVTSVWSAWCARHGLTPFPVTAVDVERYINGLNGSVKMATISHFIACLSSVNSSLGFPDFRNVLIKALVQVWRARENEKKIVTGQALPFLISDLNILRRSLHKSDDLRDIRDLAMIWVGFETLLRNVEIRRIKTGDLKWQNDTSCYLLDVMRTKTSLSSNLTFQLSPQCSQHVRRLIETVEYTDTETFGHRFLFQPVNIHTNRYFPSTSSKLSRGKSIDRMLVKAGFSEGLLTQLQNESKVSREDVGMLSSNSLNQAFARLWGIAGKVGDSNRQSGRYRTWTGHSVRVGGAIELFKAGYSLEKITEMGNWSDPKMVFRYIRGYLASEKAMVSFMRNHLDDI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CIT20_RS26725, hypothetical protein, phage(gi100071), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 4.59e-23
Locus 2: CIT20_RS26730 (Region 1)
Locus: CIT20_RS26730ORF Start: 5564
ORF Stop: 5818
Strand: Forward
Protein Sequence: MLKSPNAHSSLRETYLLKFRKCSTTETLDRVFERILDKLNDEGGDINKITSLNGAYDHRRAEIYMKKNYDKIPASVWHLIPDEI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CIT20_RS26730, transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 3: CIT20_RS26735 (Region 1)
Locus: CIT20_RS26735ORF Start: 5904
ORF Stop: 6971
Strand: Forward
Protein Sequence: MRRNAQKWIPFGFDTDSNKIVDIASVENGLSCNCICLICGTSLIARQGQNKKWHFSHSTEVKGVCSELTLQHIKKYIKVKIQEKKYLALPHLLQGKEKGIVNLKNLAGGGIVCGLNADLTGICNDTIIGIFINDTSEDIQPNPDLLAQTDQLALVEIDAVRIESIIAPYRENGEGIKMMDAIEKLLFVSEEAKKWIYHPMMKKVKHHTLHQYRRELSTSGNQILALIPHELPISMNALPSSPAQQWHHLRATINLLCRLSRSDIPQGSIAFEELVYYIPRLLEASESINVAAYERWYDFYIRKKGEGVLNEAEIEFLSFIVKIINWNLSIHNLPTFDSKQAFRDWFLLNDPNKSL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CIT20_RS26735, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: CIT20_RS26740 (Region 1)
Locus: CIT20_RS26740ORF Start: 7532
ORF Stop: 8416
Strand: Backward
Protein Sequence: MANDNNQLALIITEQDKSSGEVIHLVPNSKQSIQPKSLLRLGVFVPTVKDGSDPMARGHVIDATTELCRLSSIAGEGYEKISIFGPRLDMDTDFKVWLGIVDTLANTFLEPDGTVRVNFIDFAFSCGLATKRVDSRLRKRFSDSLTRIQHTHFQFIKNSTVEGKKVKIDMSLVSTSYYDEGTDEVIIRPNPDLNTLYRVDGKTRLYLKILKTLSRKESAQALYLYLVELPDHFYRIGFDRLRERLQLTSHKGAQNATIKKALEQLDEAGFLKYTIEKNRGDYVLVILSRNKKVT
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CIT20_RS26740, hypothetical protein, phage(gi100007), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 9.72e-57
Locus 5: CIT20_RS26745 (Region 1)
Locus: CIT20_RS26745ORF Start: 9332
ORF Stop: 10336
Strand: Backward
Protein Sequence: MENIALIGIDLGKNSFHIHCQDRRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLEELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTLLEDNSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEIGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRDLLCRKSNFVVTCALANKLARIAWALTARQQTYVA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: CIT20_RS26745, IS110 family transposase, phage(gi24375433), PROPHAGE_Shewan_MR-1
Homolog/Ortholog E-Value: 1.28e-58
Locus 6: CIT20_RS26750 (Region 1)
Locus: CIT20_RS26750ORF Start: 10415
ORF Stop: 13387
Strand: Backward
Protein Sequence: MPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGTFLGVDEPPFPPLLRMVAAQLKMPVESWSEYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASALVENLRRQSIILPAMNAIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRKDGSKVTWLAWLRQSPAKPNSRHMLEHIERLKSWQALDLPAGIERQVHQNRLLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASGKAINDKVRMYGRIGQALIEAKQSGSDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLGVLKLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSELKNALRSGDVWVQGSRQFKDFDEYLVPVEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAIITTASGLKITPLDAAVPDAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLKTSDTAKDKTLLLTTILADAINLGLTKMAESCPGTTYAKLSWLQAWHIRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFSAKVVNVGIRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETKLFIPKGDAAYDALKPMISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGTALDDTLLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CIT20_RS26750, hypothetical protein, phage(gi100060), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 7: CIT20_RS26755 (Region 1)
Locus: CIT20_RS26755ORF Start: 13390
ORF Stop: 13947
Strand: Backward
Protein Sequence: MQGQRIGYVRVSSFDQNPERQLEGVQVARVFTDKASGKDTQRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLKFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED
Homolog/Ortholog Species: Head protein
Homolog/Ortholog Protein: CIT20_RS26755, prohead core protein protease, phage(gi100061), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 6.01e-65
Locus 8: CIT20_RS26760 (Region 1)
Locus: CIT20_RS26760ORF Start: 13985
ORF Stop: 14330
Strand: Backward
Protein Sequence: LAVPECAHRLMRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCSRLLKTTNLMSDAMCKRCQNRVKFPIDHIPSKVA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CIT20_RS26760, transposase
Homolog/Ortholog E-Value: N/A
Locus 9: CIT20_RS26765 (Region 1)
Locus: CIT20_RS26765ORF Start: 14269
ORF Stop: 15282
Strand: Backward
Protein Sequence: MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CIT20_RS26765, hypothetical protein, phage(gi100032), PHAGE_Mycoba_Shipwreck_NC_031261
Homolog/Ortholog E-Value: 1.61e-11
Locus 10: CIT20_RS26770 (Region 1)
Locus: CIT20_RS26770ORF Start: 15427
ORF Stop: 15924
Strand: Forward
Protein Sequence: MNSESVRIYLVAAMGANRVIGNGPNIPWKIPGEQKIFRRLTEGKVVVMGRKTFESIGKPLPNRHTLVISRQANYRATGCVVVSTLSHAIALASELGNELYVAGGAEIYTLALPHAHGVFLSEVHQTFEGDAFFPMLNETEFELVSTETIQAVIPYTHSVYARRNG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CIT20_RS26770, putative dihydrofolate reductase, phage(gi985761486), PHAGE_Bacill_Bp8p_C_NC_029121
Homolog/Ortholog E-Value: 1.16e-33
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download