Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1384144894 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1384144894.PHASTER.zip
gi|00000000|ref|CP028996.1| Klebsiella pneumoniae strain AR_0079 plasmid unnamed5, complete 176325, gc%: 51.91%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 18.4Kb | incomplete | 30 | 18 | 117692-136179 info_outline | PHAGE_Salmon_SJ46_NC_031129(8) | 53.00% | Show info_outline |
Region DNA
>1 117692-136179 TGACGGCGGCTATTCTGAGAACACCATCCACACGATGAAGGCAGCGTTCCGGATGAATTACGCCTCTTAC ATTGACTCATCCCAGGCTGAAAAGCTGTCCACCTTCCTGGATGGATTGGTTGGTAGCGGTATCGATCAGA TCTTCGTTCATTGCTATTACGGAGAATCCAGAAGTGGCGCGGTAGCGCTGTACCTCCAGAACAAACATGG ATTCACTCCGAATAAGCCGATCACCAAGCCCAACCGAACAGTTTACGAATTGCTGTGCAATCCAACCAAG TTTGAACCACTGATGCAAAGCTACGAAACGCAACATATGGAGGAGGAACTACCTCTTCACCTCAAAATAT GGGATTTTCTTCTCGTTGCGGTCGGGCTTAGGAGGTAACTTTGCACGACACAAACAATGACAAGGAAGAG CTAGTTTCACATGCGAAAGTAAATGTTCCGGCAGAACAAAGCATTCGCGGTGAACTGTTGCCGTCATCGA GCTCGCTCCGGAACATCCAGGACAACCCCGCCGTCGCCTATCTGGTGAGCCTCGGGTCAAAGCGAAGCAG GCAGACCATGAGCTCATTCCTCAACATTGTCGCCAAGATGATCGGGTTTCAGAACCTTCGTGACTGTGCA TGGAGCTCAATGAGGCGGCACCACATATTGGCGGTGCTGGAAATGCTGGGGGATGCAGGGAAGGCTCCGG CAACGATCAACACCTACCTGTCAGCGCTCAAAGGGGTGGCTCTTGAAGCCTGGACGATGAAGCAAATTGA TACGGATAGCTTCCAGCACATTAAGCAAGTCCGTTCAGTACGTGGATCTCGACTTCCTAAAGGGCGGGCA CTTGAACGCCATGAGATTCGCAGCCTCTTTTTCACATGTGAAAGTGATTCAAGCGCCAAAGGGCTTCGGG ATGCGGCCATTCTCGGGGTGCTCCTCGGGTGTGGCTTGCGCCGCTCGGAAATCGTTGCGCTGGACATGGG AAGCATGATCTACAAGGACCGCGCTCTCAAGGTTCTTGGCAAGGGCAACAAAGAGAGAATGGCGTATGTG CCTGGTGGCGCATGGAAAAGACTGGATAAGTGGGTTGAAGAGGTTCGAGGAACGCATGAAGGGCCTTTAT TCCCGAGGATCAGGCGGTTTGATGATGTGACTGGAGAGCGGATGTCGGATCAGGCCATCTACCACATCTT GGAGACCAGAAGAGTTGAAGCCGGTCTGGAGATGTTTGCGCCCCATGACCTGCGACGCACCTTTGCCTCC TCGATGCTGGATAACGGTGAGGATATTGTGACCGTGAAGGACGCAATGGGCCACTCAAGCATTGCAACTA CCCAGAAATATGACAGACGCGGCGATGAGCGTTTGAAGAGAGCGAGCCAACGCCTCGATATAGCGGATTA ACAGCATGAATGATGAAGAACTCGAACTTGCCAGAGCCGAAGCCATGAAAGCCGATAGGTGCTTTTCAAA AGGACGGCTCAGGGACGAATTTCGGATGAAGCCTAAGCCAGGAGTAGAGCCAGTTTCGTTCTACAAAAAC GGGTATGGTGGCCAATTTGGAGTGTACCGGATAGCAGATTGCCAACCAATGCGGAGAAGGGGTTGTTCAC CGGCATCACAAAAGCAAATAAGGGCGCAATCCATCCTTTCGGTCAAGGCAAGAATGCGTAGCAACCTGGC AAAGGCCTCTGTCATGGCACAAAGGTGGGTCGCTCTGGAACCTCTGGTTCTCGATACCGAGACGACCGGA CTTGGTGAAAGAGACCAGGTGATCGAGCTGGCTGTTACTGACATCAGAGGCGCGGTTCTCCTCTGCACCA GATTACGGCCAACCGTGGAAATAGACCCTCAGGCAATGGGTGTTCATGGCATCACCGAGACTGAGCTGTC GAATGAGCCTACGTGGACTCAAGTTGCGCCAGCTCTCGCCCGGCTTTTGTCGGGCCGTCATCTGGTGATA TTTAACTCCAGTTTCGACAGTAGGATGTTGAGGCAAACAGCCAGTGCATTTGGAGACCAACTCTCTTGGT GGCAAGAGCAGAACTGTCTGTGCGCGATGAAGCTGGCGGCTGATGCCTTTGGCTCAACCAACCGGCACGG CACAATCTCACTTGCGGATGCCACCTGCGAGGCAGGTGTGAGCTGGAAAGGTCGAGCCCATTCAGCAGCG ACCGACGCTATTGCCACCGCCGACTTGGTGACAGAGATAGCCAAAGTCCAACGTGACCTCGTGGTCCAGC TCCAGGAGCTTCAAAGCAAAGGTAATTTGGAATGACAGAACAATCCTACGGCGAAAGTCTCAAATTTTTC TCAGACTGGCAGAAGGACCCCGCGAAACGCACCGGCCTGAATGTGCAACACACGCTAACCAGAGGTGAAT ATCCTACGGTCAGCATCGAGATTGCGCCGATCAGGGCATCGGGGTCCAGCCCAGACTGGAAAAGCAAGAT CACGGTGCAGCTCACTCGCGGCGAACTGACGGCGTTTTGCAGCGTTCTCTTTGGTTTGCGTAGCAAGGCT GAGGGTTCCTATCACGGCGACGCGAAGAATAAGAGCTTTGCGGTTTACAACAACGGCAAGGCCGGTGTTG CGATCATCCTTAGTGAGCGAGGAAACCAGCTCCAGAATTTCATCAATGATGACGACCGAATGGAGCTCGC AGTCTTCGCAGTTCGCCAGCTTTCCAACGCATGGAAAGTTACCCCTTCTGATGCCATCGCGCTGCTACGC CAATCAGCGTGGATGGACCGAAATTTGTCCTAATCGAGCAAATCTAGGCACTCTAAAAGTCGTCCTATAA CCACAAAGTTAGACCATCATGCAAAGTGGGGTATAGAGGGTGCCAGCCCCACCCCAGCAGTCCCCCTCAG CCACATTTCTGGCTTGCCCCGCGCTTTTCTTCTTTCTCTCTTTTTCTCTCTTTTTCTCTCTCTTTCTCAA TCTAATCTCACACACGAAGGTCAAACAGGGCACCCGCCGACGCGAAGCGGAGGCGTATTCTTGCCCCTCC CCCTCGTTGCATGATGGTCTAAATCTGTCTACTATGTAACCAATGAACTGTTAGAACAAACCCACACATA GGCGGCAGCATGGCTAAAAACTTCATATCAGAACAATTCTCGGCCATGTGCCGCGACTTAACGAACCTGT CCTCTCTTATCAAACGACTACCGCCACGGTACGCAAAAGTTGCGGCCATCCCTCCTACCGGAAAAGGAAT GGAGAACGAGCCCGTCAACAAGATTGTCGTAACTGAACAAACTGGGCGCGAAGCTCTTGAGCTGGCAGCG CACAGCTACAGAGATCTTCACATCAACCCAGACTATTCGCAGAAGTCTGCCAGGCGCACCGTGGGGGTAC TCTGGTTCTCCCCTTCCAGGATTGGTGTAGCTGACGAAATTGCGGCGACGGTTGAACGCATCAACGCGGC CAAAGCTGGTATCGAGGAGTTCATTATCTCGACGTACCCCACCAGGCAAGAGAGGTTTGAAGCACTTCGA GCGGACTGCCCTGGTGTCATGACTCTCCACCTTTACAGACAAATTCGGTGCTATACCAATGGCGACATCG ACTCTATCCGCTTCACCTGGCAACGGAAGGACTCCTTGAAGAAGCCCGTAAAAGAGGAGCTTTTGCAACG CATCAGAGAGGAGCTGGAGCGATCTGGGCCAGACTATCAACTTCCCCTGGAGCAGCTTATCCAGAAGATC GCCAGCACCCCGGAGCCTTATCTCCGGGAGCGAAGGGAAGTAAAGGTTCAACCGGTGGCAAACGTCATGG CCGCAGGGGTACTCAAAACCGTTACCGCGCCAATGCCCCTGATCGTGCTCCAGGATAAGGATGTTCAGCT CAAATTGCTTCGTAACTTTGACGCCTCAGAACAACGCAAAACTCGATCTGATAAAGCGGCATCGGAAATC CTTGGCACCTTCGGTGGAGTCACTATCGAATCCTTCCCTGGAGGGGGAACCGCAGAATTCGGAAAAAATC GTACGCTAAGCTAACGGTGTTCTCGTGACAGCTCTTTGACTAGGCTTTCTAAGGCCATTCTGATAGCCCT GACTTCCTGAAAAGCCATGGCTAAAATTTGTGCGGCTAAAAGGGATAACCGATGGTAAAGTAAGTTATCC CTGTCGAGATACTGAAAAGCGTTATCCTCGTTTTTCCCAAAACTGTTTTGCCAGTTCGCTCAGAGCGCTA GTTAACTGAGCGACAGATTTCGCACTTTGCAAATTATTCTGCCCGGTCTGTACATTGGTATCAGCAGCAT CGCGTATATTGATAATACTGCGGTTTATGTCTTCACTTACTGCTCCCTGCTGCTCGACCGCAGTCGCTAT TTGCGCGTTCATGTCGGTAATTTCGTTAACGCGTTGGCCAATTCCATCAAGAGCTGTAGCTGCTTCCTCT GCGTGAGCTACACTCGTGTGCGCTTGCCGACTACTTTGCTCCATGACTGTAACAGCGGATTGCGCTCGCT CTTGTAGAGCGCTGATCATGCTTTGAATATCCGTTGTCGATTGCTGTGTGCGAGCAGCAAGACTGCGAAC CTCATCGGCGACAACAGCAAAACCACGCCCCTGCTCACCAGCACGCGCGGCCTCAATTGCTGCGTTGAGT GCCAACAAATTCGTTTGCTCGGCGATCCCTCGTATAACGTCAAGAACTTTTGATATCTCGTTACTTTGAC CTTCAAGCTCATGAATAACCTGAGTGGCTTGCCTAATTTCACCTTCAAGGGCAGTGATTGACTGGCTTGT GTGGGCTACCAGACGCTGGCCAGATGCCGTCTCAGTGTCTGCTCTTCCGGCCGCATCTGCAGCATGCTGT GCATTGCTCGCAACCTCTTGAATGCTTGCCACCATTTGGTTTACTGCCGTTGCTATTTGATCTGTCTCTG CCTGCTGCTCAACTGTAAGTACATTGCTTGACTCAATATCCTTTAGTAGGCCTCGGGTGTGTTCGCTAAG CCGATTTGATGCATCACCTATGCGACCTACTATGGCGCCTGTTTCAGCTTGCATCATTCGTAAAGCAAAC TCTATTTGGCCAAACTCATCGGTGCGCCCAGTGTAGAGGGATTGACTTAATGGGTTATTGGAAATATTCC TGGCTCTTTCAACCAGTCTTCCAAGAGGAGAGAGAATAGCCAAAACACTAACAGAGCTTAAGCTTCCTGA CATTAAAGTGGCTAACACCTAGATTCTACGTCAGTACTTCAAAAAGCATAATCAAAGCCTTGATAAATAT GCATTCCTTCGAAATTCAGCTTTCACCCATTGGGTGAAAGAAAAGTGCTCAAAAATATGTTAAATTATCA GCTTTTATGACTCGATATATGGTAAAATAATAGTAAGAAAAGTAGTAAAAAGGGGTTCTAATTATGATTA ATAAAATTGATTTCAAAGCTAAGAATCTAACATCAAATGCAGGTCTTTTTCTGCTCCTTGAGAATGCAAA AAGCAATGGGATTTTTGATTTTATTGAAAATGACCTCGTATTTGATAATGACTCAACAAATAAAATCAAG ATGAATCATATAAAGACCATGCTCTGCGGTCACTTCATTGGCATTGATAAGTTAGAACGTCTAAAGCTAC TTCAAAATGATCCCCTCGTCAACGAGTTTGATATTTCCGTAAAAGAACCTGAAACAGTGTCACGGTTTCT AGGAAACTTCAACTTCAAGACAACCCAAATGTTTAGAGACATTAATTTTAAAGTCTTTAAAAAACTGCTC ACTAAAAGTAAATTGACATCCATTACGATTGATATTGATAGTAGTGTAATTAACGTAGAAGGTCATCAAG AAGGTGCGTCAAAAGGATATAATCCTAAGAAACTGGGAAACCGATGCTACAATATCCAATTTGCATTTTG CGACGAATTAAAAGCATATGTTACCGGATTTGTAAGAAGTGGCAATACTTACACTGCAAACGGTGCTGCG GAAATGATCAAAGAAATTGTTGCTAACATCAAATCAGACGATTTAGAAATTTTATTTCGAATGGATAGTG GCTACTTTGATGAAAAAATTATCGAAACGATAGAATCTCTTGGATGCAAATATTTAATTAAAGCCAAAAG TTATTCTACACTCACCTCACAAGCAACGAATTCATCAATTGTATTCGTTAAAGGAGAAGAAGGTAGAGAA ACTACAGAACTGTATACAAAATTAGTTAAATGGGAAAAAGACAGAAGATTTGTCGTATCTCGCGTACTGA AACCAGAAAAAGAAAGAGCACAATTATCACTTTTAGAAGGTTCCGAATACGACTACTTTTTCTTTGTAAC AAATACGGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCAGGCAA TACGCACGCTTTCAGGCATACCTGCTTTCGTCATTTTGTTCAGCGCTCGTACCAGGGCCATAGCCTCCGC AACCTGACCATCGTAGTCACGCAGCGTCAGTGAACCCCCGAACAGCTGTTTTACCCGGTACATCGCCGTT TCCGCTATCGAGCGACGGTTGTAATCTGTTGTCCATTTCCACCGCGCATTACTCCCGGTCATTCGCTGAT TAGCCACTGCACGGTTACGGTCTGCATATTCACCGGGCCAGTAACCCGCACCTTTTCGGGGCGGGATAAG CGCGCTGATTTTCTTACGCCGCAGTTCATCGTGACAGAGCCGGGTATCGTAAGCTCCATCGGCGGCGGCT GACCTGATTTTCCGGTGGGTTTGCCGGATTAACCCGGGGAAGGCCTCTGAGTCCGTAACGTTGTTCAGCG ACAGGTCAGCGCAGATGATTTCATGTGTTTTACTGTCAACTGCCAGATGCAGCTTACGCCATATACGACG GCGTTCCTGGCCATGCTTTTTGACTTTCCACTCGCCTTCACCGAAGACCTTCAGCCCGGTGGAATCAATT ACCAGGTGTGCGATTTCACCCCGGGTGGGCGTTTTGAAACTGATATTAACCGACTTTGCCCGCCTGCTGA CACAGCTGTAATCCGGGCAGCGTAGCGGAACGTTCATCAGAGAAAAAATGGAATCAATAAAGCCCTGCGC AGCGCGCAGGGTCAGCCTGAATACGCGTTTAATGACCAGCACAGTCGTGATGGCAAGGTCAGAATAGCGC TGAGGTCTGCCTCGTGAAGAAGGTGTTGCTGACTCATACCAGGCCTGAATAGCTTCATCATCCAGCCAGA AAGTTATGGAGCCACGGTTGATGAGGGCTTTATTGTAGGTGGGCCAGTTGGTGATTTTGAACTTTTGCTT TGCCACGGAACGGTCTGCGTTGTCGGGAAGATACGTGATCTGATCCTTCAACTCAGCAAAAGTTCGATTT ATTCAACAAAACCAGTTACAGCCCTTCGGCGATGATTCTCGCCGCTGAAGCCAGCACATCGCGGCGGCTC TCTGCGTTCTGTTGCGGCTGGGTAAAATAGGTCACCAGAACCAGCGGCGCACGACCCTGCGGCCAGATCA CCGCAATATCATTGGTGGTGCCGTAGTCGCCGCTGCCGGTCTTATCACCCACAGTCCACGACGTCGGTAA GCCGGCCCGAATGCTGGCTGCGCCGGTCGTATTGCCTTTGAGCCACGTCACCAACTGCGCCCGCTGGGTT TCGCCCAGCGCATGACCCAGCGTAAGCTGACGCAACGTCTGCGCCATCGCCCGCGGCGTGGTGGTGTCTC TCGGGTCGCCGGGAATGGCGGTATTCAGCGTAGGTTCAGTGCGATCCAGACGAAACGTCTCATCGCCGAT CGCGCGGGCAAAAGCCGTCACGCCTCCCGGGCCACCGAGCTGGGCAATCAATTTGTTCATGGCGGTATTG TCGCTGTACTGCAACGCGGCCGCGCTCAGTTCTGCCAGCGTCATTGTGCCGTTGACGTGTTTTTCGGCAA TCGGATTGTAGTTAACCAGATCGGCAGGCTTGATCTCGACAGGCTGATTAAGCAGCTGCTTTTGCGTTTC ACTCTGCTTAAGCACCGCCGCGGCCGCCATAACTTTACTGGTACTGCACATTGGAAAGCGTTCATCACCG CGATAAAGCACCTGCGTATTATCTGCGGTATCGATGAGCGCGACGCCCAGCCGCCCTCCGCTGCTTTTCT CCAGCGCCGCCAGCTTTTGCTGCACCGCACTCGTCTGCGCATAAAGCGGCGCGCTGCCCAGCAGCAGCGG AATGCACGCCGCCGCCGCGAACATCATCCGTTGCACTCTCTTTGTCACCATCTCAAACTCCCAATACGGT CAATCCGTGTTACATCAGTATTCCCTAAATTCCACGTGTGTTTTTTATTAGCTTCAAAAATCACTATTTC ACGAAGAATTTAGACTGCTTCTCACACATTGTAACATTATTTACAACCACCTTTCAATCATTTTTGATAA ATCATTGATTTCATCTTTGCTGCAATGATACTTAATAAACTCTGCAAGTTATCCACAGAGCAACACTCAA TTTTATTGATGATATTCTTATTATACCAGACATTTTTCATACACTCCCTTGTACGGATAGTTTTCCGACA ACTTCATGATTACATATCTTGCGGTTTTGATTATTTTTGCTGCAAGAAATACATACTTCAAACGAAAGGT CTTTATTTGCTGTCTGTATTCTGAAGAGTCCAAGGAATCAAACTTGAACAACAAAAATAGGTTATATGAA AGCATCATCATTTGAAACACGGCTTCATTCGCCCAAAATGACTTTAGCAAGAGATGACCCACCGCCATGT CGTATTTGGCTTCTTTGATATAGTTTTCAGCATTACCACGCTTTTCATAGTATATAACTACTTTTTCAGA AAGCAAGGTAGTATTTGTTGGTTTTGTTGAATAAATCGAACTTTTGCTGAGTTGAAGGATCAGATCACGT ATCTTCCCGACAACGCAGACCGTTCCGTGGCAAAGCAAAAGTTCAAAATCACCAACTGGCCCACCTACAA TAAAGCCCTCATCAACCGTGGCTCCATAACTTTCTGGCTGGATGATGAAGCTATTCAGGCCTGGTATGAG TCAGCAACACCTTCTTCACGAGGCAGACCTCAGCGCTATTCTGACCTTGCCATCACGACTGTGCTGGTCA TTAAACGCGTATTCAGGCTGACCCTGCGCGCTGCGCAGGGCTTTATTGATTCCATTTTTTCTCTGATGAA CGTTCCGCTACGCTGCCCGGATTACAGCTGTGTCAGCAGGCGGGCAAAGTCGGTTAATATCAGTTTCAAA ACGCCCACCCGGGGTGAAATCGCACACCTGGTAATTGATTCCACCGGGCTGAAGGTCTTCGGTGAAGGCG AGTGGAAAGTCAAAAAGCATGGCCAGGAACGCCGTCGTATATGGCGTAAGCTGCATCTGGCAGTTGACAG TAAAACACATGAAATCATCTGCGCTGACCTGTCGCTGAACAACGTTACGGACTCAGAGGCCTTCCCCGGG TTAATCCGGCAAACCCACCGGAAAATCAGGTCAGCCGCCGCCGATGGAGCTTACGATACCCGGCTCTGTC ACGATGAACTGCGGCGTAAGAAAATCAGCGCGCTTATCCCGCCCCGAAAAGGTGCGGGTTACTGGCCCGG TGAATATGCAGACCGTAACCGTGCAGTGGCTAATCAGCGAATGACCGGGAGTAATGCGCGGTGGAAATGG ACAACAGATTACAACCGTCGCTCGATAGCGGAAACGGCGATGTACCGGGTAAAACAGCTGTTCGGGGGTT CACTGACGCTGCGTGACTACGATGGTCAGGTTGCGGAGGCTATGGCCCTGGTACGAGCGCTGAACAAAAT GACGAAAGCAGGTATGCCTGAAAGCGTGCGTATTGCCTGAAAACACAACCCGCTACGGGGGAGACTTACC CGAAATCTGATTTATTCAACAAAGCCACGCGCTGGACACACCACGATGACAGCGGTTTTATCCCTTACGC CATCACCACCGGCCTTGATTACGAGGCGATGACCGAACAGCGCAAAGGCTATGAGAACTTTGTTTATCAG AACGGCGTTTACGATCTCGGCACCAAAGGTGATATGCGACGTAACGAACGTAACCTGATGTGGAACCTCG ATCCCTACATTCAAACGCACTGGCAGCTCACCTCAGCCCTGGGGCTGGACGCCGGGGCGCGCTATAGCTC GGTATGGTTTGATTCCAACGATCGTTATGTTGTAGGTAAAAATGGTGATGATAGCGGCGAAGCGAGCTAT CACAAGTGGCTTCCGGCGGCAGCGCTGAAGTATGCCATGACGCCGCAGTGGAACGTTTACCTCTCTGCCG GGAGGGGATTTGAAACGCCGACCATTAACGAGCTGTCCTATCGTCCCGATGGTCAGTCCGGGCTTAACTT TGCTCTGCAACCGGCCACTAACACCACCGTTGAAGCAGGCAGTAAATGGCAGGTGGGCACCGGGATGGCG AGCCTGAGCGTCTTCAATACGGACACGAAAAATGAAATTGTCGTTGCCGCCAGCGACAATGGCCGTACGT CCTATCAGAACGCGGGCAAGACGCGCCGCCGCGGGGTCGAACTGGGATGGGATCAGCAATTTGCGCCCGC CTGGCGCGCCAAACTGGCGTGGACGCTGCTGGATGCGACCTACCGTGAAAACGCCGGCGATGCTATTCAG AGCGGCAATCGGATCCCGGGGATTGCACGTAATAGCGCCTATGCCTCCTTTGGCTGGGTGCCGGAAGAGG GATGGTACGCTGGCGCTGAAGTCCGCTATATGAGCGATATTCAGGTCAACGATGCCAATAGCGAGCAGGC TCCAGCCTATACGGTGACGGCACTGAATACCGGCTATAAATATGTGCTAGATAACTGGACCGTCGACCTC TATACGCGCGTTGATAACCTGTTTGATAAGCGCTACGTCGGCTCTGTTATCGTCAACGAGAGCAACGGAC GCTATTATGAACCGGCGCCGGGCCGTAACTATGGCGTTGGGCTATCGGTCAGCTATCAGTTTGATTCGCT GTAACAATACGGCTGCCGGAGAGTGCTATTGAGGTGAGGCTCCGGCAGCGGGTAAAGGCGTTGATTCCTG GTAACAATAAGCTGCTTATTGATGTATCAGTAAGCATGCCGGCAGCCATTGCGCTTGATATAATACTACC CCATATGAGCAAGAGTATTTTCACGGAAAAGCTAGCAGCCAATTTCGGCCTCGCGGCCTTCCCGCTTCTC AATTGAGCATATAATTTTTCCGCAGCCAAAACCTGCTCAGGTTCAGGCTTGGTCCTTACAGACTGGTATT CAACAATCGAACCATTCTTAGCTATTGGCGTTACATAAGCACTTACCCAATAGTGGTCGCCATTTTTACA GCGATTTTTTACTAGCCCCATCCATGAGCGGCCAGATTTTAATGTACTCCACATATGCTCAAATGCAGCA GGCGGCATATCTGGGTGTCTTACGATGTTGTGAGGCTGGCCTAATAGTTCTTCCTCAGTGAAACCACTGA TTTTAATGAAGTCAGGATTAACGTACGTGATATGGCTTTGAGGGGAGGTAGTCGAAAGAATATTGGCATC TTTTGGGAGTTCTAAGTTTCGACCCGTCACTGGTAAATTCTGGCGCATAAGAACCTCAAGGGTTGGCTGT TTTATTTTATTGTTTTCGGCATTAAGCCCAATTTCTTGAGCGTTACGATAAAGCTAGCATGGAAACGATA GGTGCAAGCAAGTTAAGGGTTGCATCGCGCATGTCAATCTAGGCTATACCCTAACTTGATGTCAGGCAGG GCCGCGCCGCTTCGTCAGAATAGAGTCTGCTTTCCCATTTTTTGACACATGCCCGCGAAGGTTATAGATT TCAGCCTGACAGAAATGGGCTTTGAGGCACAACGGAACAGAAAGTGCACTTAAGCCGCCTTCAACCAAGG AGACATCGTGCAGGGGCACCGCATCGGCTACGTCCGGGTCAGCAGCTTTGACCAGAACCCGGAACGCCAG CTGGAACAAACCCAGGTGAGCAAGGTGTTCACCGACAAGGCATCGGGCAAGGACACCCAGCGCCCCCAGC TCGAAGCGCTGCTGAGCTTCGTCCGCGAAGGCGATACAGTGGTGGTGCACAGCATGGATCGGCTGGCCCG CAACCTCGATGACCTGCGTCGCTTGGTACAGAAGCTGACTCAGCGCGGCGTGCGCATCGAGTTCCTGAAG GAGGGCCTGGTGTTCACTGGCGAGGACTCGCCGATGGCCAACCTGATGCTGTCGGTGATGGGGGCCTTCG CTGAGTTCGAGCGCGCCCTGATCCGCGAGCGGCAGCGTGAGGGCATCGCCTTGGCCAAGCAGCGTGGCGC GTACCGGGGCCGCAAGAAAGCCCTGTCCGATGAGCAGGCTGCTACCCTGCGGCAGCGAGCGACGGCCGGC GAGCCCAAGGCGCAGCTTGCCCGCGAGTTCAACATCAGCCGGGAAACCCTCTACCAGTACCTCCGCACGG ACGACTGACACATGCCGCGTCGCTTGATCCTCTCGGCCACGGAGCGGGACACCCTGCTTGCGCTGCCGGA AAGCCAGGATGACCTGATCCGCTACTACACCTTCAACGACTCCGACCTGTCGCTGATCCGCCAGCGACGC GGCGACGCCAACCGCCTCGGCTTCGCCGTGCAGCTCTGCCTGCTGCGCTACCCCGGTTACGCGCTGGGAA CCGACAGCGAGCTGCCCGAGCCGGTCATCCTGTGGGTGGCGAAGCAAGTCCAGGCCGAGCCGGCGAGCTG GGCAAAGTACGGCGAGCGCGACGTGACCCGTCGCGAGCATGCCCAGGAACTGCGCACCTACCTGCAACTG GCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTAACCGAGCTGGCCCAGCAGACCGACA AAGGCTTGCTGCTGGCCGGTCAGGCCCTGGAGAGCCTACGGCAGAAACGACGCATCCTGCCGGCGCTGAG CGTGATTGACCGGGCCTGCTCGGAAGCCATTGCGCGAGCCAATCGGCGGGTCTACCGCGCCCTGGTCGAA CCACTCACGGACTCGCATCGGGCCAAGCTGGACGAGCTGTTGAAGCTCAAGGCCGGCAGCAGCATCACCT GGTTGACCTGGCTGCGCCAGGCACCGCTGAAACCCAACTCTCGGCACATGCTGGAACACATCGAGCGGCT GAAGACATTTCAGTTGGTGGACTTGCCCGAAGGCCTGGGCCGGCACATCCACCAGAACCGCCTGCTCAAG CTGGCCCGCGAGGGTGGGCAGATGACGCCCAAAGACCTCGGTAAGTTCGAGCCGCAGCGCCGCTACGCGA CCCTGGCCGCCGTGGTGCTGGAGAGCACCGCGACCGTGATCGATGAGCTGGTCGATCTGCATGACCGCAT CCTGGTCAAGCTGTTCAGCGGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAGCAGGGCAAGGCGATC AACGACAAGGTGCGCCTGTACTCCAGGATCGGCCAGGCGCTGCTGGAAGCGAAGGAAAGCGGCAGCGACC CCTATGCCGCCATCGAGGCGGTGATTCCCTGGGACGAGTTCACCGAGAGCGTCAGCGAGGCCGAGCTGCT GGCCCGGCCGGAAGGCTTCGACCACCTGCACCTGGTCGGCGAGAACTTCGCCACCCTGCGCCGTTACACG CCGGCCTTGCTGGAGGTGCTGGAACTGCGCGCCGCGCCGGCCGCGCAAGGCGTGCTGGCAGCCGTGCAGA CCCTGCGTGAGATGAACGCCGACAACCTGCGCAAGGTGCCGGCCGATGCACCCACGGCCTTCATCAAGCC GCGCTGGAAGCCGCTGGTGATCACCCCGGAAGGCCTCGACCGGAAATTCTACGAAATCTGCGCCCTGTCC GAGCTGAAGAACGCCCTGCGCTCCGGCGACATCTGGGTCAAGGGCTCGCGGCAGTTCCGCGACTTCGACG ACTACCTGCTGCCGGCCGAGAAGTTCGCCGCACTCAAGCGCGAGCAGGCCCTGCCCCTGGCGATCAACCC GAACAGCGACCAGTACCTGGAAGAGCGTTTGCAGCTGCTGGACGAGCAGTTGGCCACCGTCACCCGCCTG GCCAAGGACAACGAGCTGCCCGATGCCATCCTCACCGAGTCAGGGCTGAAAATCACCCCGCTGGATGCGG CGGTGCCGGATCGGGCGCAGGCGCTGATCGACCAAACCAGCCAGTTACTGCCGCGCATCAAGATCACCGA ACTGCTGATGGACGTGGACGACTGGACGGGCTTCAGCCGCCACTTCACCCACTTGAAGGACGGGGCCGAG GCCAAAGACAGGACGTTGCTGCTGTCCGCAATCCTCGGTGATGCGATCAACCTCGGGCTGACCAAGATGG CCGAGTCGAGCCCCGGCCTGACCTACGCCAAGCTGTCCTGGCTGCAAGCCTGGCACATCCGCGACGAAAC CTATTCGGCGGCCTTGGCCGAGCTGGTCAACCACCAGTATCGCCACGCCTTTGCCGCCCACTGGGGCGAC GGCACGACCTCATCCTCCGATGGCCAGCGCTTCCGCGCGGGTGGCCGGGGCGAGAGCACCGGGCACGTCA ACCCGAAGTACGGTAGCGAGCCGGGACGGCTGTTCTATACCCATATCTCCGACCAGTACGCGCCGTTCAG CACCCGCGTGGTGAATGTCGGCGTCCGCGATTCCACCTATGTGCTCGACGGCCTGCTGTACCACGAGTCC GACCTGCGGATCGAGGAGCACTACACCGACACGGCCGGCTTCACCGATCACGTCTTTGCCCTGATGCACC TGCTAGGCTTCCGCTTCGCGCCGCGCATCCGCGACCTCGGCGAAACCAAGCTGTACGTGCCGCAGGGCGT GCAAGCCTACCCGACGTTGCGCCCGCTGATCGGCGGCACCCTGAACATCAAGCACGTGCGTGCCCACTGG GACGACATCCTGCGCCTGGCCAGCTCGATCAAGCAGGGCACCGTCACCGCCTCGCTGATGCTGCGCAAGC TCGGCAGCTACCCGCGCCAGAACGGACTGGCCGTGGCCCTGCGCGAGCTGGGCCGGATCGAGCGCACGCT GTTCATCCTGGACTGGCTGCAAAGTGTTGAACTGCGCCGCCGCGTGCATGCCGGCCTGAACAAAGGTGAG GCGCGCAACTCGCTGGCCAGGGCGGTGTTCTTCAACCGCCTTGGGGAAATCAGGGATCGGAGCTTCGAGC AGCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCGGCTATCGTGCTGTGGAACACGGTGTACCT GGAACGCGCCACCCAGGGGTTGGTCGAGGCCGGCAAGCCGGTGGACGGCGAGCTGCTGCAATTCCTGTCG CCGCTGGGCTGGGAGCACATCAACCTAACCGGCGATTACGTCTGGCGGCAGAGCCGCAGACTGGAAGACG GGAAGTTTCGGCCCTTACGGATGCCCGGAAAACCTTAGCGTACGATTTTTTCCGAATTCTGCGGGCTCCC CCTGGATGAATCAGCGTGACCGCGTAACAAGGCTTTTCCGCAGCCGGAAGGGCTTTGTCCCACACAAACA ATTCCAATCGACAGCAGCATGATATATAATTATGATAATTACCGTATTATCGTAATTATCGTAATTATCG TAATTATCGTAAACATTACAAATTAAAAGGAACGTTCTCATGGCAAGAAAATTGGTTGAGTTTGACGATG TAGCGGCTGCGGCCCAAAAGCTCAAGGACGCCGGTAAACGCCCAACGGTCATCGCTATCAGAGACATCAT TGGCAAGGGGAGCTTTACCACCATTTCAACGTATCTCAAACAGTGGTCAGAGGAACACTCCCTCGATGAA GAGCTGGTAGAGGTAGTCCTTCCAGAATCGGTTATGAGCGATGCTGAGCTCTTCCTACAGAAGATCTATA CGGTAGCCAAAGCAAGCGCCGATGAACAGCTTGAGCGCGAGCGTGAACTGCTACGACAGAAAGAAATTGA GTACCAGGAAGATATGCAGCAAGCCGTGGACATGGCAAATGATGCCACCGAACGGGCTGAGCTACTGGAG GAACAACTTGAAGCTCTCACCAACAAAAAATCAGAGCTCGATGCGGCCCTTGGTAAGGCAGAAAACTCGC TATCCCTCAAGTCTGCGGAGCTAGAACGCTCACTGGCTGACATTGATAAGCTGGAAAAGCGGATCGTTGA GTTGGAGGGCAAGCTGGAGGCGAAAGCCGCAGATCTGACCCGAGCACAGGATCACCTGGAGCAAGCTAAA AGCGAAAATCGCTCTTTGAGCCAAAAATTGGCAACTACAGAGGGTGAGTTGGAGGAGCAAAAAGGCAAGA GTATAGAGCAGACAGAAAAGCTCCGGGCCGCTCAGGAACAAAAAACATCGTTGAAAGAGCAGCTCGAAAA TGTACAGGCCAAACTGGCCCAATCACAGGACTCCCTTGCCACAGCCAAAGCTCATGGCGAATCCGCTGAA CGAGAGTGCCAGCGCCTATCTGGAGAGGTAGAAAAGCTGGACGCCAAATTATCCAGCGCCGAAGCAGAAG CTCGCGCTCTTGTTCAAGACAAAGGCATGATGGCTGGTCAGTTGCAGGAAAAAGACCAGCAGGCCAAGAG CCTCGAACAAAGACTCAATGATGCACTGACCAAAATTTCTGGGTTGGAGCAAGAGCTCGCTAAAGCTGGT AAGGGAGGGAAAAAGAAAGAGGAAAACTGATGGCGCGAAAGGCTAAATATTCAGAAGAGTGGCGACACAG AGCTGCGGCTCTTCAAACCAAGATTGAGGAGGCTATGACACTAGCCACCTCATCTATTGGCGACTATCGC TGGTTACACCGTCTCCATAGTTGGGTTACGGAGGTGGCTCAAGGTAAAGCCCCAGACTGGTGGACAGATC TGGATTGTGAAGTATCCCTCCCCCGAGAAGAAAAGCGGATCAGTACGTTCCTCTCGACACAAAAGAAGCG CATCACTCTCCAGATGTGTTTGTCGTAGGGGGCCTCATGAAACAACTTCCTCCTGACACACCAGAACAAT CACTGATCACTCAGTACAAAGGGCCTCGCCTTGTCGTTAAGGCCTACGCTGGAACGGGTAAAACCACGAC ACTGGTGAAGTACGCCCACAACAACCTCGATTCACGTATCCTCTACTTGGCATACAACAGGGCTATCCGC GACGAGGCAAGAGAAAAGTTTCCTGCAAACGTAGACTGCAAAACGTCCCACCAGCTTGCCTACGCCACTA TAGGAAGGGGCTACCAGCACAAACTCTCCGGCAACCTAAGGCTCACCGATATTGCCCAAGCGGTGAATAC CAAGAACTGGACGTTTGCCAAAGATATTCTCGATACGCTCAACGCCTTTATGTGTAGTGCAGACATGCGG ATTCTTTATACGCATTTTGCTCGCGCCGATACGGGTAAAGTGCTTACGTCCAAACAGGAGAGATACCAAA TCCAGGTGGTCGAAGGTGCTGAGCTCATATGGAAACGGATGACAAACGTTCAAGATCCGTTCCCGACCGT ACACGATTGCTACCTCAAACAGTATCAGCTCGGGATGCCGAATCTGTCTCGCCGGTACACCACCATTCTT TTTGATGAAGCACAAGACGCTAACCCCGTAACAAGTAGCATCGTCCTACAGCAGAACTGCAAGGTAATCC TGGTTGGAGATCGCCACCAGCAGATCTATAGGTTCAGAGGCGCAAACAACGCCCTTGATAGCAAAGAGCT CATGAACGCCGACCAACTCTATCTCACTCATAGCTTCCGCTTTGGCCCCAACGTTTCGCTGGTGGCAAAC GCCCTTCTTGAACTCAAAGGTGAAACACGACCTGTTGTTGGCCGGGGACCAGCAGATCAGGTACTCATGT TTTTACCAGGTGACGTGGGCCACCGCGCAATACTTCACCGAACCGTCATGGGGGTTATAGAGACGGCGCT CTCTGCGACCGAATCCGGAGCGCAGGTATTCTGGGTCGGTGGAATCGACGCTTACCAGATCAATGAGCTC CAGGATTTGTACTGGTTTTCGATGGCAGAGCCAGACCGGGTAAAGAATAAGAAACTGCTTGATGAGTATG AAGACTACTTCGAGTATCAAGAAGTAGCGAAGGCGACCAAAGACCCTGAGATGATGAGGGCTGTCAAGAT CATCAACAGCTACGATGAAATCCCTGAACGACTCACCACTCTACGACGCAATACAGTCAAAGAAGAGTTT GGGGCTGACATTACGGTCTCAACAGCTCATCGGTGCAAAGGGTTGGAGTGGGACTTTGTTCAGCTCTATG ACGACTTTCCGGATGTCCTGGACCCAGAGCTCGACCCAATGGCCCGTGACGATGAAATAAACCTGCTCTA CGTTGCATCCACCAGAGCGATGCGAATCCTTGCGTTGAACAGCGCTGTCGAGATGGTTATCCGCTACATC ACCCAAAAACGCATGGTCGAGAAGCAGATGAAGATGGCCGCAGAAGCGACAGAAGTTGAAGAGGACACGA CCAAATAG
Region Details
| Region | 1 |
| Region Length | 18.4Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | transposase,head |
| Region Position | 117692-136179 |
| # tRNA | 0 |
| # Total Proteins | 18 |
| # Phage Hit Proteins | 12 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 77.7% |
| # Bacterial Proteins | 4 |
| Attachment Site | yes |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Salmon_SJ46_NC_031129(8) PHAGE_Pseudo_PAK_P3_NC_022970(1) PHAGE_Acinet_vB_AbaM_Acibel004_NC_025462(1) PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1) PHAGE_Bacill_Stills_NC_028777(1) PHAGE_Vibrio_SHOU24_NC_023569(1) PHAGE_Klebsi_phiKO2_NC_005857(1) PHAGE_Vibrio_PWH3a_P1_NC_020863(1) PHAGE_Entero_HK022_NC_002166(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Rhodoc_ReqiDocB7_NC_023706(1) PHAGE_Vibrio_VP882_NC_009016(1) PHAGE_Bacill_Staley_NC_022767(1) PHAGE_Entero_186_NC_001317(1) PHAGE_Escher_phAPEC8_NC_020079(1) PHAGE_Acinet_vB_AbaM_phiAbaA1_NC_031280(1) PHAGE_Bacill_Slash_NC_022774(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) PHAGE_Escher_pro483_NC_028943(1) |
| First Most Common Phage # | 9 |
| First Most Common Phage % | 44.44% |
| GC % | 53.00% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP028996.1| Klebsiella pneumoniae strain AR_0079 plasmid unnamed5, complete 176325, gc%: 51.91%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 20 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 117692..117704 | attL | 0.0 | Showinfo_outline |
| 2 | 118082..119092 | PHAGE_Bacill_Stills_NC_028777: hypothetical protein; AM458_29950; phage(gi100096) | 2.61e-10 | Showinfo_outline |
| 3 | 119097..119966 | PHAGE_Entero_186_NC_001317: Orf81; AM458_29955; phage(gi9634093) | 2.83e-29 | Showinfo_outline |
| 4 | 119963..120454 | hypothetical protein; AM458_29960 | 0.0 | Showinfo_outline |
| 5 | 120781..121695 | DNA replication terminus site-binding protein; AM458_29965 | 0.0 | Showinfo_outline |
| 6 | complement(121843..122889) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_29970; phage(gi100068) | 2.79e-73 | Showinfo_outline |
| 7 | 122871..122978 | flavodoxin family protein; AM458_29975 | 0.0 | Showinfo_outline |
| 8 | 123075..124013 | IS1380-like element ISEc9 family transposase; AM458_29980 | 0.0 | Showinfo_outline |
| 9 | complement(124054..124977) | PHAGE_Salmon_SJ46_NC_031129: sigma factor for late transcription; AM458_29985; phage(gi100065) | 0.0 | Showinfo_outline |
| 10 | complement(125057..125932) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_29990; phage(gi100066) | 0.0 | Showinfo_outline |
| 11 | complement(126182..126619) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_29995; phage(gi100067) | 3.42e-56 | Showinfo_outline |
| 12 | 126608..127531 | PHAGE_Salmon_SJ46_NC_031129: sigma factor for late transcription; AM458_30000; phage(gi100065) | 0.0 | Showinfo_outline |
| 13 | 127588..128685 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_30005; phage(gi100064) | 0.0 | Showinfo_outline |
| 14 | complement(128753..129289) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_30010; phage(gi100063) | 5.66e-131 | Showinfo_outline |
| 15 | 129599..130159 | PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; AM458_30015; phage(gi100061) | 3.52e-83 | Showinfo_outline |
| 16 | 130163..133129 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM458_30020; phage(gi100060) | 0.0 | Showinfo_outline |
| 17 | 132915..132927 | attR | 0.0 | Showinfo_outline |
| 18 | 133341..134381 | KfrA protein; AM458_30025 | 0.0 | Showinfo_outline |
| 19 | 134381..134659 | hypothetical protein; AM458_30030 | 0.0 | Showinfo_outline |
| 20 | 134668..136179 | PHAGE_Acinet_vB_AbaM_phiAbaA1_NC_031280: hypothetical protein; AM458_30035; phage(gi100100) | 5.66e-51 | Showinfo_outline |
Sequence
>117692..117704
TGACGGCGGCTAT
Sequence
>118082..119092
[Klebsiellapneumoniae]
Sequence
>119097..119966
[Klebsiellapneumoniae]
Sequence
>119963..120454
[Klebsiellapneumoniae]
Sequence
>120781..121695
[Klebsiellapneumoniae]
Sequence
>complement(121843..122889)
[Klebsiellapneumoniae]
Sequence
>122871..122978
[Klebsiellapneumoniae]
Sequence
>123075..124013
[Klebsiellapneumoniae]
Sequence
>complement(124054..124977)
[Klebsiellapneumoniae]
Sequence
>complement(125057..125932)
[Klebsiellapneumoniae]
Sequence
>complement(126182..126619)
[Klebsiellapneumoniae]
Sequence
>126608..127531
[Klebsiellapneumoniae]
Sequence
>127588..128685
[Klebsiellapneumoniae]
Sequence
>complement(128753..129289)
[Klebsiellapneumoniae]
Sequence
>129599..130159
[Klebsiellapneumoniae]
Sequence
>130163..133129
[Klebsiellapneumoniae]
Sequence
>132915..132927
TGACGGCGGCTAT
Sequence
>133341..134381
[Klebsiellapneumoniae]
Sequence
>134381..134659
[Klebsiellapneumoniae]
Sequence
>134668..136179
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 176325 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 117692
ORF Stop: 117704
Strand: Forward
Protein Sequence: TGACGGCGGCTAT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: AM458_29950 (Region 1)
Locus: AM458_29950ORF Start: 118082
ORF Stop: 119092
Strand: Forward
Protein Sequence: MHDTNNDKEELVSHAKVNVPAEQSIRGELLPSSSSLRNIQDNPAVAYLVSLGSKRSRQTMSSFLNIVAKMIGFQNLRDCAWSSMRRHHILAVLEMLGDAGKAPATINTYLSALKGVALEAWTMKQIDTDSFQHIKQVRSVRGSRLPKGRALERHEIRSLFFTCESDSSAKGLRDAAILGVLLGCGLRRSEIVALDMGSMIYKDRALKVLGKGNKERMAYVPGGAWKRLDKWVEEVRGTHEGPLFPRIRRFDDVTGERMSDQAIYHILETRRVEAGLEMFAPHDLRRTFASSMLDNGEDIVTVKDAMGHSSIATTQKYDRRGDERLKRASQRLDIAD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_29950, hypothetical protein, phage(gi100096), PHAGE_Bacill_Stills_NC_028777
Homolog/Ortholog E-Value: 2.61e-10
Locus 3: AM458_29955 (Region 1)
Locus: AM458_29955ORF Start: 119097
ORF Stop: 119966
Strand: Forward
Protein Sequence: MNDEELELARAEAMKADRCFSKGRLRDEFRMKPKPGVEPVSFYKNGYGGQFGVYRIADCQPMRRRGCSPASQKQIRAQSILSVKARMRSNLAKASVMAQRWVALEPLVLDTETTGLGERDQVIELAVTDIRGAVLLCTRLRPTVEIDPQAMGVHGITETELSNEPTWTQVAPALARLLSGRHLVIFNSSFDSRMLRQTASAFGDQLSWWQEQNCLCAMKLAADAFGSTNRHGTISLADATCEAGVSWKGRAHSAATDAIATADLVTEIAKVQRDLVVQLQELQSKGNLE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM458_29955, Orf81, phage(gi9634093), PHAGE_Entero_186_NC_001317
Homolog/Ortholog E-Value: 2.83e-29
Locus 4: AM458_29960 (Region 1)
Locus: AM458_29960ORF Start: 119963
ORF Stop: 120454
Strand: Forward
Protein Sequence: MTEQSYGESLKFFSDWQKDPAKRTGLNVQHTLTRGEYPTVSIEIAPIRASGSSPDWKSKITVQLTRGELTAFCSVLFGLRSKAEGSYHGDAKNKSFAVYNNGKAGVAIILSERGNQLQNFINDDDRMELAVFAVRQLSNAWKVTPSDAIALLRQSAWMDRNLS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_29960, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: AM458_29965 (Region 1)
Locus: AM458_29965ORF Start: 120781
ORF Stop: 121695
Strand: Forward
Protein Sequence: MAKNFISEQFSAMCRDLTNLSSLIKRLPPRYAKVAAIPPTGKGMENEPVNKIVVTEQTGREALELAAHSYRDLHINPDYSQKSARRTVGVLWFSPSRIGVADEIAATVERINAAKAGIEEFIISTYPTRQERFEALRADCPGVMTLHLYRQIRCYTNGDIDSIRFTWQRKDSLKKPVKEELLQRIREELERSGPDYQLPLEQLIQKIASTPEPYLRERREVKVQPVANVMAAGVLKTVTAPMPLIVLQDKDVQLKLLRNFDASEQRKTRSDKAASEILGTFGGVTIESFPGGGTAEFGKNRTLS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM458_29965, DNA replication terminus site-binding protein
Homolog/Ortholog E-Value: N/A
Locus 6: AM458_29970 (Region 1)
Locus: AM458_29970ORF Start: 121843
ORF Stop: 122889
Strand: Backward
Protein Sequence: VLATLMSGSLSSVSVLAILSPLGRLVERARNISNNPLSQSLYTGRTDEFGQIEFALRMMQAETGAIVGRIGDASNRLSEHTRGLLKDIESSNVLTVEQQAETDQIATAVNQMVASIQEVASNAQHAADAAGRADTETASGQRLVAHTSQSITALEGEIRQATQVIHELEGQSNEISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTQQSTTDIQSMISALQERAQSAVTVMEQSSRQAHTSVAHAEEAATALDGIGQRVNEITDMNAQIATAVEQQGAVSEDINRSIINIRDAADTNVQTGQNNLQSAKSVAQLTSALSELAKQFWEKRG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_29970, hypothetical protein, phage(gi100068), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 2.79e-73
Locus 7: AM458_29975 (Region 1)
Locus: AM458_29975ORF Start: 122871
ORF Stop: 122978
Strand: Forward
Protein Sequence: TLKWLTPRFYVSTSKSIIKALINMHSFEIQLSPIG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM458_29975, flavodoxin family protein
Homolog/Ortholog E-Value: N/A
Locus 8: AM458_29980 (Region 1)
Locus: AM458_29980ORF Start: 123075
ORF Stop: 124013
Strand: Forward
Protein Sequence: MINKIDFKAKNLTSNAGLFLLLENAKSNGIFDFIENDLVFDNDSTNKIKMNHIKTMLCGHFIGIDKLERLKLLQNDPLVNEFDISVKEPETVSRFLGNFNFKTTQMFRDINFKVFKKLLTKSKLTSITIDIDSSVINVEGHQEGASKGYNPKKLGNRCYNIQFAFCDELKAYVTGFVRSGNTYTANGAAEMIKEIVANIKSDDLEILFRMDSGYFDEKIIETIESLGCKYLIKAKSYSTLTSQATNSSIVFVKGEEGRETTELYTKLVKWEKDRRFVVSRVLKPEKERAQLSLLEGSEYDYFFFVTNTALLNK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM458_29980, IS1380-like element ISEc9 family transposase
Homolog/Ortholog E-Value: N/A
Locus 9: AM458_29985 (Region 1)
Locus: AM458_29985ORF Start: 124054
ORF Stop: 124977
Strand: Backward
Protein Sequence: MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRSAAADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM458_29985, sigma factor for late transcription, phage(gi100065), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 10: AM458_29990 (Region 1)
Locus: AM458_29990ORF Start: 125057
ORF Stop: 125932
Strand: Backward
Protein Sequence: MVTKRVQRMMFAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_29990, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 11: AM458_29995 (Region 1)
Locus: AM458_29995ORF Start: 126182
ORF Stop: 126619
Strand: Backward
Protein Sequence: MLCHGTVCVVGKIRDLILQLSKSSIYSTKPTNTTLLSEKVVIYYEKRGNAENYIKEAKYDMAVGHLLLKSFWANEAVFQMMMLSYNLFLLFKFDSLDSSEYRQQIKTFRLKYVFLAAKIIKTARYVIMKLSENYPYKGVYEKCLV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_29995, hypothetical protein, phage(gi100067), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 3.42e-56
Locus 12: AM458_30000 (Region 1)
Locus: AM458_30000ORF Start: 126608
ORF Stop: 127531
Strand: Forward
Protein Sequence: MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRSAAADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM458_30000, sigma factor for late transcription, phage(gi100065), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 13: AM458_30005 (Region 1)
Locus: AM458_30005ORF Start: 127588
ORF Stop: 128685
Strand: Forward
Protein Sequence: TRWTHHDDSGFIPYAITTGLDYEAMTEQRKGYENFVYQNGVYDLGTKGDMRRNERNLMWNLDPYIQTHWQLTSALGLDAGARYSSVWFDSNDRYVVGKNGDDSGEASYHKWLPAAALKYAMTPQWNVYLSAGRGFETPTINELSYRPDGQSGLNFALQPATNTTVEAGSKWQVGTGMASLSVFNTDTKNEIVVAASDNGRTSYQNAGKTRRRGVELGWDQQFAPAWRAKLAWTLLDATYRENAGDAIQSGNRIPGIARNSAYASFGWVPEEGWYAGAEVRYMSDIQVNDANSEQAPAYTVTALNTGYKYVLDNWTVDLYTRVDNLFDKRYVGSVIVNESNGRYYEPAPGRNYGVGLSVSYQFDSL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_30005, hypothetical protein, phage(gi100064), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 14: AM458_30010 (Region 1)
Locus: AM458_30010ORF Start: 128753
ORF Stop: 129289
Strand: Backward
Protein Sequence: MRQNLPVTGRNLELPKDANILSTTSPQSHITYVNPDFIKISGFTEEELLGQPHNIVRHPDMPPAAFEHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAYVTPIAKNGSIVEYQSVRTKPEPEQVLAAEKLYAQLRSGKAARPKLAASFSVKILLLIWGSIISSAMAAGMLTDTSISSLLL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_30010, hypothetical protein, phage(gi100063), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 5.66e-131
Locus 15: AM458_30015 (Region 1)
Locus: AM458_30015ORF Start: 129599
ORF Stop: 130159
Strand: Forward
Protein Sequence: MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQLEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATAGEPKAQLAREFNISRETLYQYLRTDD
Homolog/Ortholog Species: Head protein
Homolog/Ortholog Protein: AM458_30015, prohead core protein protease, phage(gi100061), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 3.52e-83
Locus 16: AM458_30020 (Region 1)
Locus: AM458_30020ORF Start: 130163
ORF Stop: 133129
Strand: Forward
Protein Sequence: MPRRLILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQAEPASWAKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALSVIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKPNSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSRIGQALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRYTPALLEVLELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPEGLDRKFYEICALSELKNALRSGDIWVKGSRQFRDFDDYLLPAEKFAALKREQALPLAINPNSDQYLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDAAVPDRAQALIDQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLTKMAESSPGLTYAKLSWLQAWHIRDETYSAALAELVNHQYRHAFAAHWGDGTTSSSDGQRFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQAYPTLRPLIGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHINLTGDYVWRQSRRLEDGKFRPLRMPGKP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_30020, hypothetical protein, phage(gi100060), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 17: attR (Region 1)
Locus: attRORF Start: 132915
ORF Stop: 132927
Strand: Forward
Protein Sequence: TGACGGCGGCTAT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 18: AM458_30025 (Region 1)
Locus: AM458_30025ORF Start: 133341
ORF Stop: 134381
Strand: Forward
Protein Sequence: MARKLVEFDDVAAAAQKLKDAGKRPTVIAIRDIIGKGSFTTISTYLKQWSEEHSLDEELVEVVLPESVMSDAELFLQKIYTVAKASADEQLERERELLRQKEIEYQEDMQQAVDMANDATERAELLEEQLEALTNKKSELDAALGKAENSLSLKSAELERSLADIDKLEKRIVELEGKLEAKAADLTRAQDHLEQAKSENRSLSQKLATTEGELEEQKGKSIEQTEKLRAAQEQKTSLKEQLENVQAKLAQSQDSLATAKAHGESAERECQRLSGEVEKLDAKLSSAEAEARALVQDKGMMAGQLQEKDQQAKSLEQRLNDALTKISGLEQELAKAGKGGKKKEEN
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM458_30025, KfrA protein
Homolog/Ortholog E-Value: N/A
Locus 19: AM458_30030 (Region 1)
Locus: AM458_30030ORF Start: 134381
ORF Stop: 134659
Strand: Forward
Protein Sequence: MARKAKYSEEWRHRAAALQTKIEEAMTLATSSIGDYRWLHRLHSWVTEVAQGKAPDWWTDLDCEVSLPREEKRISTFLSTQKKRITLQMCLS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_30030, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 20: AM458_30035 (Region 1)
Locus: AM458_30035ORF Start: 134668
ORF Stop: 136179
Strand: Forward
Protein Sequence: MKQLPPDTPEQSLITQYKGPRLVVKAYAGTGKTTTLVKYAHNNLDSRILYLAYNRAIRDEAREKFPANVDCKTSHQLAYATIGRGYQHKLSGNLRLTDIAQAVNTKNWTFAKDILDTLNAFMCSADMRILYTHFARADTGKVLTSKQERYQIQVVEGAELIWKRMTNVQDPFPTVHDCYLKQYQLGMPNLSRRYTTILFDEAQDANPVTSSIVLQQNCKVILVGDRHQQIYRFRGANNALDSKELMNADQLYLTHSFRFGPNVSLVANALLELKGETRPVVGRGPADQVLMFLPGDVGHRAILHRTVMGVIETALSATESGAQVFWVGGIDAYQINELQDLYWFSMAEPDRVKNKKLLDEYEDYFEYQEVAKATKDPEMMRAVKIINSYDEIPERLTTLRRNTVKEEFGADITVSTAHRCKGLEWDFVQLYDDFPDVLDPELDPMARDDEINLLYVASTRAMRILALNSAVEMVIRYITQKRMVEKQMKMAAEATEVEEDTTK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM458_30035, hypothetical protein, phage(gi100100), PHAGE_Acinet_vB_AbaM_phiAbaA1_NC_031280
Homolog/Ortholog E-Value: 5.66e-51
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download