Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1388214979 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1388214979.PHASTER.zip
gi|00000000|ref|CP029225.1| Klebsiella pneumoniae strain L388 plasmid pKPC-L388. 145851, gc%: 53.75%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 0 regions are incomplete, and 1 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 19.5Kb | questionable | 90 | 23 | 2670-22235 info_outline | PHAGE_Salmon_SJ46_NC_031129(7) | 50.16% | Show info_outline |
Region DNA
>1 2670-22235 TTGTTGAGCCGTACAGACGCCCGCAATATTCACTGGCTGAGCTACTGGCACAGTGTGATCCGAATGCTGA AATATCAGCTGAAGAACGAGAATGGCTGGATGCACCGGCGACTGGTCAGGAGGAAATCTGACATGGAAAG AGGGGAAATCTGGCTTGTCTCGCTTGATCCTACCGCAGGTCATGAGCAGCAGGGAACGCGGCCGGTGCTG ATTGTCACACCGGCGGCCTTTAATCGCGTGACCCGCCTGCCTGTTGTTGTGCCCGTAACCAGCGGAGGCA ATTTTGCCCGCACTGCCGGCTTTGCGGTGTCGTTGGATGGTGTTGGCATACGTACCACAGGTGTTGTACG TTGCGATCAACCCCGGACAATTGATATGAAAGCACGGGGCGGAAAACGACTCGAACGGGTTCCGGAGACT ATCATGAACGAAGTTCTTGGCCGCCTGTCCACTATTCTGACTTGAACATGGGGTTTGAGGGGCAACTGGA TGAAAACGTACGATTTAGGGCACTAAAACCGCTGTTGTCCCACCATTCTGGTGATTCCCAAACGTTATTT GGCTAAAAAGTAGTTTTGATGTGGTTTATTTTCCGAATTCCAAGCGCAGCCCTACTTTCTTGTGCGTATT TGCGTGTTTTGCGCAGTTTTGAAGTTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT TTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT AACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGT TCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATG CCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGC AGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGG ATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTT GCGCACGTATTGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGCAACGTTTTCTGCCTCTGACG CCTCTTTTAATGGTCTCAGATGTCCTTTGGTCACCAGTTCTGCCAGCGTGAAGGAATAATGGCCGAGCAT ATTGATATGTCCGTGGCAAAGCGGGGAGAGGCGTGCGATATCTTCATCATTCAGTGTTTCACCCTGCGCC CGGAGATGATCCAGGGCTGCCTGCATATAAATAGTGTTCCATAACACGACGGCGTTAGTGACCAGCCCCA GTGCGCCCAGTTGATCTTCCTGACCGTCGGTATATCGTTTTCTTATCTCACCTTTTTGACCGTGACAGAT GGCTCTGGCAACGGCATGGCGACTTTCTCCCCGATTAAGCTGGGTCAGAATGCGCCGGCGGTAATCTTCA TCATCAATATAATTAAGCAGATACAGCGTTTTGTTGATGCGCCCCACTTCAATGATTGCCTGAGTCAGTC CGGAAGGACGTTCACTTTTCAGCAATGAACGGACCAGCACTGAAGCCTGTACTTTGCCCAGCTTCAGGGA GCCAGCGGTCCGGATCATTTCGTCCCACTGAAGGACTATTTTTGGCACTGTTGCAAAGTTAGCGATGAGG CAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGG ATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTG GCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGC ATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTT GAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTC TTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAA AATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTA GGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATT TCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCA TCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACG CTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCAC CACCGACTATTTGCAACAGTGCCATTCGGATTTCATATAACCTATTTTTGTTGTTCAAGTTTGATTCCTT GGACTCTTCAGAATACAGACAGCAAATAAAGACCTTTCGTTTGAAGTATGTATTTCTTGCAGCAAAAATA ATCAAAACCGCAAGATATGTAATCATGAAGTTGTCGGAAAACTATCCGTACAAGGGAGTGTATGAAAAAT GTCTGGTATAATAAGAATATCATCAATAAAATTGAGTGTTGCTCTGTGGATAACTTGCAGAGTTTATTAA GTATCATTGCAGCAAAGATGAAATCAATGATTTATCAAAAATGATTGAAAGGTGGTTGTAAATAATGTTA CAATGTGTGAGAAGCAGTCTAAATTCTTCGTGAAATAGTGATTTTTGAAGCTAATAAAAAACACACGTGG AATTTAGGGAATACTGATGTAACACGGATTGACCGTATTGGGAGTTTGAGATGGTGACAAAGAGAGTGCA ACGGATGATGTTCGCGGCGGCGGCGTGCATTCCGCTGCTGCTGGGCAGCGCGCCGCTTTATGCGCAGACG AGTGCGGTGCAGCAAAAGCTGGCGGCGCTGGAGAAAAGCAGCGGAGGGCGGCTGGGCGTCGCGCTCATCG ATACCGCAGATAATACGCAGGTGCTTTATCGCGGTGATGAACGCTTTCCAATGTGCAGTACCAGTAAAGT TATGGCGGTCGCGGCGGTGCTTAAGCAGAGTGAAACGCAAAAGCAGCTGCTTAATCAGCCTGTCGAGATC AAGCCTGCCGATCTGGTTAACTACAATCCGATTGCCGAAAAACACGTCAACGGCACAATGACGCTGGCAG AACTGAGCGCGGCCGCGTTGCAGTACAGCGACAATACCGCCATGAACAAATTGATTGCCCAGCTCGGTGG CCCGGGAGGCGTGACGGCTTTTGCCCGCGCGATCGGCGATGAGACGTTTCGTCTGGATCGCACTGAACCT ACGCTGAATACCGCCATTCCCGGCGACCCGAGAGACACCACCACGCCGCGGGCGATGGCGCAGACGTTGC GTCAGCTTACGCTGGGTCATGCGCTGGGCGAAACCCAGCGGGCGCAGTTGGTGACGTGGCTCAAAGGCAA TACGACCGGCGCAGCCAGCATTCGGGCCGGCTTACCGACGTCGTGGACTGTGGGTGATAAGACCGGCAGC GGCGACTACGGCACCACCAATGATATTGCGGTGATCTGGCCGCAGGGTCGTGCGCCGCTGGTTCTGGTGA CCTATTTTACCCAGCCGCAACAGAACGCAGAGCGCCGCCGCGATGTGCTGGCTTCAGCGGCGAGAATCAT CGCCGAAGGGCTGTAACTGGTTTTGTTGAATAAATCGAACTTTTGCTGAGTTGAAGGATCAGATCACGTA TCTTCCCGACAACGCAGACCGTTCCGTGGCAAAGCAAAAGTTCAAAATCACCAACTGGCCCACCTACAAT AAAGCCCTCATCAACCGTGGCTCCATAACTTTCTGGCTGGATGATGAAGCTATTCAGGCCTGGTATGAGT CAGCAACACCTTCTTCACGAGGCAGACCTCAGCGCTATTCTGACCTTGCCATCACGACTGTGCTGGTCAT TAAACGCGTATTCAGGCTGACCCTGCGCGCTGCGCAGGGCTTTATTGATTCCATTTTTTCTCTGATGAAC GTTCCGCTACGCTGCCCGGATTACAGCTGTGTCAGCAGGCGGGCAAAGTCGGTTAATATCAGTTTCAAAA CGCCCACCCGGGGTGAAATCGCACACCTGGTAATTGATTCCACCGGGCTGAAGGTCTTCGGTGAAGGCGA GTGGAAAGTCAAAAAGCATGGCCAGGAACGCCGTCGTATATGGCGTAAGCTGCATCTGGCAGTTGACAGT AAAACACATGAAATCATCTGCGCTGACCTGTCGCTGAACAACGTTACGGACTCAGAGGCCTTCCCCGGGT TAATCCGGCAAACCCACCGGAAAATCAGGTCAGCCGCCGCCGATGGAGCTTACGATACCCGGCTCTGTCA CGATGAACTGCGGCGTAAGAAAATCAGCGCGCTTATCCCGCCCCGAAAAGGTGCGGGTTACTGGCCCGGT GAATATGCAGACCGTAACCGTGCAGTGGCTAATCAGCGAATGACCGGGAGTAATGCGCGGTGGAAATGGA CAACAGATTACAACCGTCGCTCGATAGCGGAAACGGCGATGTACCGGGTAAAACAGCTGTTCGGGGGTTC ACTGACGCTGCGTGACTACGATGGTCAGGTTGCGGAGGCTATGGCCCTGGTACGAGCGCTGAACAAAATG ACGAAAGCAGGTATGCCTGAAAGCGTGCGTATTGCCTGAAAACACAACCCGCTACGGGGGAGACTTACCC GAAATCTGATTTATTCAACAAAGCCACGCGCTGGACACACCACGATGACAGCGGTTTTATCCCTTACGCC ATCACCACCGGCCTTGATTACGAGGCGATGACCGAACAGCGCAAAGGCTATGAGAACTTTGTTTATCAGA ACGGCGTTTACGATCTCGGCACCAAAGGTGATATGCGACGTAACGAACGTAACCTGATGTGGAACCTCGA TCCCTACATTCAAACGCACTGGCAGCTCACCTCAGCCCTGGGGCTGGACGCCGGGGCGCGCTATAGCTCG GTATGGTTTGATTCCAACGATCGTTATGTTGTAGGTAAAAATGGTGATGATAGCGGCGAAGCGAGCTATC ACAAGTGGCTTCCGGCGGCAGCGCTGAAGTATGCCATGACGCCGCAGTGGAACGTTTACCTCTCTGCCGG GAGGGGATTTGAAACGCCGACCATTAACGAGCTGTCCTATCGTCCCGATGGTCAGTCCGGGCTTAACTTT GCTCTGCAACCGGCCACTAACACCACCGTTGAAGCAGGCAGTAAATGGCAGGTGGGCACCGGGATGGCGA GCCTGAGCGTCTTCAATACGGACACGAAAAATGAAATTGTCGTTGCCGCCAGCGACAATGGCCGTACGTC CTATCAGAACGCGGGCAAGACGCGCCGCCGCGGGGTCGAACTGGGATGGGATCAGCAATTTGCGCCCGCC TGGCGCGCCAAACTGGCGTGGACGCTGCTGGATGCGACCTACCGTGAAAACGCCGGCGATGCTATTCAGA GCGGCAATCGGATCCCGGGGATTGCACGTAATAGCGCCTATGCCTCCTTTGGCTGGGTGCCGGAAGAGGG ATGGTACGCTGGCGCTGAAGTCCGCTATATGAGCGATATTCAGGTCAACGATGCCAATAGCGAGCAGGCT CCAGCCTATACGGTGACGGCACTGAATACCGGCTATAAATATGTGCTAGATAACTGGACCGTCGACCTCT ATACGCGCGTTGATAACCTGTTTGATAAGCGCTACGTCGGCTCTGTTATCGTCAACGAGAGCAACGGACG CTATTATGAACCGGCGCCGGGCCGTAACTATGGCGTTGGGCTATCGGTCAGCTATCAGTTTGATTCGCTG TAACAATACGGCTGCCGGAGAGTGCTATTGAGGTGAGGCTCCGGCAGCGGGTAAAGGCGTTGATTCCTGG TAACAATAAGCTGCTTATTGATGTATCAGTAAGCATGCCGGCAGCCATTGCGCTTGATATAATACTACCC CATATGAGCAAGAGTATTTTCACGGAAAAGCTAGCAGCCAATTTCGGCCTCGCGGCCTTCCCGCTTCTCA ATTGAGCATATAATTTTTCCGCAGCCAAAACCTGCTCAGGTTCAGGCTTGGTCCTTACAGACTGGTATTC AACAATCGAACCATTCTTAGCTATTGGCGTTACATAAGCACTTACCCAATAGTGGTCGCCATTTTTACAG CGATTTTTTACTAGCCCCATCCATGAGCGGCCAGATTTTAATGTACTCCACATATGCTCAAATGCAGCAG GCGGCATATCTGGGTGTCTTACGATGTTGTGAGGCTGGCCTAATAGTTCTTCCTCAGTGAAACCACTGAT TTTAATGAAGTCAGGATTAACGTACGTGATATGGCTTTGAGGGGAGGTAGTCGAAAGGGCACTGTTGCAA AGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGC ATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAA TACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAG TTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCAC CGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCG GGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACG GGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCA TTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCA GCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCC GCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCAC AGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGAT GATAAGTTTATCACCACCGACTATTTGCAACAGTGCCGTCAGAGGGGATGGCAATGCCGGAGTCGTTGTC ACATATCACGACGGAATCACAGTGGAGAAGCCTGGTGCTGAAATCCGGCGGAAAATACTGGCATGTGTAC ATGTCGAAGAAGACAGCCGGAGGGCGGAATACGGCACGCTACCTGGGTCGTTATCTGAAGAAGCCACCAA TAGCGGCTTCCCGACTGGCTCATTACAACGGAGGGGCAAGCCTGAGCTTCCGTTACCTGGACCACAAAAC GGGAGAAACGGCGACGGAAACGCTGACACAGCGTGAGCTGGTCGCGAGGCTGAAACAGCACATCCCGGAG AAGTTTTTTAAGATGGTGAGGTACTTCGGGTTCCTTGCCAACCGTGTGTGTGGAGAGAAGCTGCCGCAGG TGTACCGTGCACTGGGGATGGATAAACCGGAACCAGTGGCGAAAGTGTGCTATGCACAAATGGTGAAACA GTTCCTGAGTCGTGACCCGTTCGAATGCGTGCTGTGTGGCTGCCGGATGGTATACCGCCGGGCCATTGCG GGGCTGAATGTATCAGGGCTGAAGAAAAACGCGCGGGATATCAGTCTACTGAGGTATATGCCGGCCTGAC ACAGGCTAAGTGTGCCCGGGAATCGGTGAAAGTATAAAAAACAGCCTGTTACGGTATAAAAATCGACCAT ACAGAGAGGGAAACCACCGGAGTGGTGGGAAAAGCAGAAAGGCTCACGTGGCATAAGGCGTGGACAATGG TATCGACTGGTTTTTCAATTTCCTATACGTCAAGAGACTGCTGACTGGTTGAGACCCGAGCGTAACCAAA AAGTCGCATAAAAATGTACCTTAAATCGAATATCGGACAACTCATGTCTATTATTACAAATTTACGATTT AATAGACATATTAATGTAACAGTTTTACGATGTCCGATAATTTATAACATTTCGTACGGTTGGAAAAATG TTACTAAATGCCCGTCAGGCAGGGAGGCCGATATGCCCGTTGGCACTGTTGCAAATAGTCGGTGGTGATA AACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGAC ATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGG CTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGA AAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTG AAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATC TCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTG GCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGC GAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATC ATGGCAAACTGAAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCCACCAT CAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTG GGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCAT CGCTAACTTTGCAACAGTGCCCCTCTGACCACGCTTTCAGAAGCAGCTGCCGCATATTCCACATCCACCG TGAACGCATCGCGTCTTTCAGGAAGCTCAGCTTTTTCCACTGACCATGCTTATTCAGACCTCCACAGGTT ACAGACACATGTACATGCGGATGCCAGTTGAGACGACGGCCATACGTGTGGATGGCGCAGAAGATACCGG GTTCCAGCCCCCGTTTTCGGGCGGCATACAGCAGATTCTCCACCGCCAGACGGCACACGTCATTCAGCAG CCAGCGGTTGCTTTCGAACACCGGCCACAGCGTGTCCGGCAGGGTGAAGACCAGATGTACCCAGTCGCAG TCAGGAAGACGATTCAGCTGTGTTGCTGTCCACAGGTCTGTGGCCTTCTTTCCGCAGGACGGGCAGGCAC GGCTGCCGCATGAGTTGGTCAGGTACTTTACGTGCTGACAGTCCGGGTTATCACACCCGAACTCTTTTAC ACCCAGTATCCGTGTGCCGCAGGCCAGCATTTTGGTGACGGCTTCAACCTCGATATCGCGCAGACCGCCC GCATCCAGGAAGGACGTCCAGCACTGGTTGGCTGTGAACAGACGTTTCAGAGGGCGGGGAGTAAAACCGG ACAACATGAGGATGGATTAAACCCCGGTATCCTGTAGCAGGGTAAGGGCTGCTGTATCGCCACGGCGCTT CAGGATGGAGGTCGTCACCATCGCAGGTGGTGGGTCCATGGGTTTGAGCATTTTCATCCAGTCCCATTCT CGTTGTGAGAGCTTCTCAGCACCAACAGAGAGCAGAACTGTATCGATACTTTTGCGGGTCAACATAAGGG GATGAGTCCTTAATAAAACAGGTCCTCAGAGCATACATATTCTGCGGGGCGTGCGGCAACAACAGGACGA ACCGGGGCGGTTTTCAATTTGCAGCCGCCAGGCTGCCGTGGTTCATCTTCAGGTCAGAGCACTCAAAGAC GCAGGTGTGAAAGCAAACCGTATATTTACCGATAAGGCATCCGGCAGTTCAACAGACCGGGAAGGGCTGG ATTTGCTGAGGATGAAGGTGGAGGAAGGTGATGTCATTCTGGTTAAGAAGCTCGACCGTCTTGGCCGCGA CACTGCCGATATGATCCAACTGATAAAGGAATTTGACGCTCAGGGCGTGGCAGTCCGGTTCATTGATGAC GGGATCAGTACCGACGGTGATATGGGGCAAATGGTGGTCACCATCCTGTCGGCTGTGGCACAGGCTGAAC GCCGGAGGATCCTAGAACGCACGAATGAGGGCCGACAGGAAGCAAAGCTGAAAGGAATCAAATTTGGCCG CAGGCGTACCGTGGACAGGAACGTCGTGCTGACGCTTCATCAGAAGGGCACTGGTGCAACGGAAATTGCT CATCAGCTCAGTATTGCCCGCTCCACGGTTTATAAAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCT ATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCT GGTAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTTCGTGTCGCCCTTATTCC CTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTC GCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGTGCGGTATTATCCCGTGT TGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTG ATAACACTGCTGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAA CATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG CGTGACACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTC TAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGC CCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGG ATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGT TTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTT TTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGAAAACG ATTTAGGAGACACCGATGAACATCAACGATGCCCTCACCTCCATCCTGGCCTCAAAAAAATACCGCGCCC TTTGCCCGGATACCGTGCGGCGCATCCTGACTGAGGAATGGGGGCGGCATAAATCCCCCAAACAGACCGT AGAGGCTGCACGCACCCGGCTGCATGGAATTTGCGGGGCATATGTCACCCCGGAATCGCTCAAGGCTGCT GCCGCCGCGCTTTCTGCGGGCGATGTAAAAAAGGCATTGTCGCTGCATGCCTCCACCAAGGAGCGACTGG CCGAGCTGGATACCCTGTACGATTTTATCTTTTCAGCCGAAACTCCCCGCCGCGTGCTGGATATCGCCTG CGGTCTTAACCCCTTGGCGCTATACGAGCGCGGCATTGCATCCGTGTGGGGCTGTGATATCCACCAGGGA TTGGGGGATGTCATCACCCCCTTTGCTAGGGAAAAAGATTGGGATTTTACCTTTGCCCTGCAGGATGTGC TGTGTGCGCCGCCCGCCGAAGCCGGCGACCTGGCGCTGATTTTTAAGCTTTTGCCCCTGCTGGAGCGGGA GCAGGCCGGTTCTGCCATGGCACTTTTACAATCCCTCAATACCCCGCGCATGGCTGTCAGCTTTCCCACG CGTAGTTTAGGCGGGCGTGGAAAAGGCATGGAGGCGAACTACGCCGCATGGTTCGAGGGCGGCTTGCCCG CCGAGTTTGAGATTGAGGATAAAAAGACCATCGGAACAGAACTTATATACTTGATAAAAAAGAATGGATA AGCCAATCAGAAGGCAAATCATCTAAAAAAGAGGAACGAAAAATATTTTTCGTTCCTCTTTTGTTCTATC GAACAAGCACACTACGACTGCTGTTTTTGAAGCAGCCTTTTATAGCTCAGCTCGATGCCCAACGCCCCCA GCGGCGCTGTAAGTATAATGGCAAGAACCGCCACCGCAAGTATGGTTTCCCCACTGCCAAGCCCCATCGC CAGCGGAATAGCGCCGATTGCAGCCTGCACCGTTGCCTTGGGCAGATAGGCAATCATGCAGAACAGGCGC TCCTTCCGGGATAGGTCTGTACCCAGCGTACTCATCCACACGCCCAGCATGCGAAACAGCAGCGCAGCTG TGATCAGCAGCATGCCGCTTAGCCCGGCGGAGAAAAGGTAACGGATGTGGCACTGTTGCAAAGTTAGCGA TGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCC AGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGA TGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATG ATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCG CGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCC ACTTCTTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAG ATAAAAATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTC ACGTAGGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTT CCATTTCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGC CAGCATCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATG TCACGCTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTT ATCACCACCGACTATTTGCAACAGTGCCTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATT ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAAACAGGGATTATTTATTCTCTCAGGCGA GAATAAAATAGACGAAGAATGTTTCATTAATATAGTCCAAACGGCTGTCGCCATAAATAACATCGGTAGA GAATCTAATGGTTATATTTTAGTTGGTGTTTCCGATACCAAAGCTACGGCAGACAGAGTTAAGACTTTAT ATGGTGTTACCCCTATTGAGTGCAATGGCTATTATATCAATGGAATTGATCATGAAGCTGTAATTCAATC AAAAAACATAGATAATTACTTTCTGTTCATAAAACAAAAAATAGAATCATTTAATTTTAATGAGGCTTTG AAACAACAAATACTAAAAGATATTTCATTATGTTCATATGAAGGACTGCATGTTTTAAAAATCGAAATAA AAAGTGTCGGAGAAGTCTGTCATTTTGAAAATAGGTATTATATAAGACAAGGAACAGCTACGCATTTAAT CACTGACGGTGAAGCAATTAGTAGTTTACACAGATTATATTACTCATAATTACTTAAGCACTATGAAGGT ATCATACACCTTCATAGTGTACTTTTTTACTGCGCTTTGGGGCTAAATTGTTTTTGTGAATAGCCAGAAT ATCGTGGCTACGGCGGCAATGGAAATATATGATCTCTGCTGCCAGAGACTGGAGATGTAATTGGGGGCAG TTTGGATATCGAAAATTATTGTACTATAAGGGGTCCGCTTGAGGGGGCCGCTTGGAAAACGGAAATTTTC CCACGCTAAGAGAATTGAGTTGAACGAGTGGTTACATCTAGGACAGCTAACTCACTGAACGTAAAGGCTG TACGAAATGTTCCGACCGTCCGATAACCATTTGGCTTACTTCCGTACATTTCCTTGCGTAGATGTACAGA ATTGTACGATTTCGGACACCAAAACTGCTGTTGTCCCGGTGCATGAAGCTACTTTCCGGGTTGGTGGTAC TGACTTTGGTGTTCTTAACGACGACGTTTTCAACTCTGAAAATCGCCTCTCTGCACGGGGATTTTTACCC CCCCATAGAGCCGTCATATAAATTCAAATTATTAACTTTGATGGTAGAATTATCTTAGGTTTGATAAAAT TTTGAGCCGTCGCCGTTTACTTCACAGGATTCAATATAATGGCTAAATATACAGTTTGTGATTACCAATA AACTATTAGAAATAATGGGAATGGTTGTGCCAATCTCTATCTGGAGGTCTTATTGCAGGGAACATCCACC CCATCGTTACACCAATACAGAATTGCCCCCGATACAAGACATCCAGACATTAACCTAATAAAAGCGCACC TTGACGAGGGCTTTCAGCAGGCAAAGTCTGAGGGATTAAAAGTAGAGATTTCAGATTATAAAGAACGTCT TTACCTGTACATTAGAACACCTGGTAATAACCTAATGCAATATTCTGGTTGCAGAGAAAAATAATACAGT CGCGCTGGATACGCTGACATTGACGCAGTTATATGATTTTCTGGCGTTGGTCAGTAAACCAGCTGCAGCC AAAACGGTGTAGTCCCTGACACAGGCGCCGGTCATTCTGTTAACTCATCCACGTATGGGATGAACAGTTG TTTCAGTTTGAAACCAGGGATGTCAGACGGATTTTTGCTGGCGAGTACGAAATCCGTTACGAACTTAATG GCCAGACTATTTATGTATTGCGCCTGTGACACACACGAGAAAACAGGTAGATTGTGTGTGAGGGCAACTT TAACATAGCCTGCAGGTGTTAATTCAGGAGCATTGTTATCAGACCAAATATTTTTCATTCCATTAAATAG TCTTGTAGGGGATAAAATGAATTACGATGAAATAACGAAAATCACTGCAGAACGTATTAGCGACTACATG ACTGAAGCGGTTAATACAGACTCTAAATCTGTTGCGGAAATGTTTCATAACGCTGCATGGGGAGTGCTAT CATTGTGGTTTGAACTCGTCACAAAAATAGATCTGGATATACATAAAAAGAACAGGTATGCAAGTTATGA TTTTAGAAGAAAAATCGAAATGCAGCATGAAGAGTTTCAGAAAATGACAGAGCGTGAGCAAGTGCCTTTA TTGAAATTGCCTGAATAACAGAGACAGTGCAAACGATTATTTCATAATAACGATTATGTAATGACTGGTA AGAAAATAACTTGATTGAGTTCCCTTTATCCAGCCTGATAGTGGATAAAGGGAACTCAATAATAATTGAA TTAATTTATTAGCTTCATCGCATTTTTTTTGGTCTCTTCATCACTTTTTTGCTCTTGTTGTGAAGAGGAT TGAGTGACTATTGAAGAATTAAAATCGGCCATCTCTTTTGGAAATAGCGATCTCAATATATTCACGATAT CTGAAAATGTGGTTTCTTTCGTCAGCAGCTCACATAAAAGGAAAGGGGTCCGGGGATCTTGTCTGTATAA GGCCAGACCTGCCGTCAGTGCGGCCCGGTTAAGGCGGCTTCGTTCCCCTTGCGGGATACTGTCCAGTGTA TCACAAACAATTTTATCTGTTTGATTTACATCTGGATTTAGTTTGAAGGCAATGGTTCTGCGCTTGTCCA TCATTAATTACCTATGAGATACATACCGTTAACTAAATCATATTGAGAGTTATTGGTTTTGAAAAAACGT TCATCACGAATCTGTGTGTGTTTTTTTACTGCATCGCATATTAATTCTGCGCCACCGCCTATAACCATAA CATGAGTATAACCAGAAAATTCATTGAGCGTATTTAATACACGTTGCTCAAGTTTACGAAGTGCTTCATT CATTGCTTCGGTGACTATTGATATTTTGTTCTCATCATTAATTCGTTGCTTCAGATAGTTATTATCTTTT CTGTGAATGATTATATCGTCAGCAAGATAGCTACTTCCTTTTGTTCTCGCAAGAGAAAGGGCATCTTTTA CTGCAGATGTAACCAGAGAGACACCAAGAGATGAGTCTCCGTATATTTTACTGATCCCCGATAATTTCCC CATTACCTGAGAAATATCTAATGTGGTGCCCCCGAGATCTATAATTAATAAAGAATCTAACTCATCCAGT TCTTGTAGAACTTCATAACCTGCCGGTATAGATTCAGGCATGACTTTTACATCTTTTATTGTGAATGTAT CCCCGCCATTTAATGTAATTTTTTTCCGGAAGTTTGCTTTCTTACGCTCAATATTTTCCGTATTGGGTTG GTTATTTCTGTCGTAATACTCTGTCAGAGGAAGTGTGCAAACAATATCCACTTCGCTTACCGGCAGACCA CTGGTCAGTAAGGCGTGATGCACTGCAACGACATTAACGTCGCTGTATTGCCATGCGATATTGGTTGTGA CTACAGCATCCGGGCTGATTGGATCAAATGAATACTGTTCGCCGTTCAGTGTGTAGTTAAAGACCTTTTT ATCACCAAAAGAGACTGCCCACTCGCGTTTGAAGCTGTTCGGGCTAATGTGCTGTTTAATTGTTCCGTCG CTTTCCTGCCACTGTAGTTTGATGTTTGTTGAACCGTCATCAATGAATACCAACATTTATAAAACTCCTT ATGGTGTTTTTTTGGTGTGTGTTTGGGTATGTTTTGGGTTTTAAGTGGGTTTGTTTGTCAAGTTTACCCC ATTTCAACCATCAATCAATGATTATTTGTCTTGTTTTGGTGTTTTATTGGGTTGGGTATGGGTTGTTTTT GGGTTTTGTTTGGCGGGTAACAAAAGATGTCGCCGGGCTCCTCTTTTTACTGCGCCGGCTGACGCGGCGC GGCAGGAACGCTGCCTGTGGTCAGTGTCCCGCGTCCGGCCGGGCACGGGACGGGCGCTTTTACCGCTCCC GGCTGGCGTTGGTGACAGTGTACGCCAGCCCGTCGCCCTTTTCTGATGAACGCCCTTCAAGCCGCTTTCG CGGCATATCCTCGCCGTCAAAAAGACGACGGCTGCGGTATTCCACGGTCGGCCTGACCCGTTACCGGACG CGGTGAACAGCCCACAGGCAGCGGGGAACGGGCACCACAGGGGTGCCCTCCCGGTGCCCTCTGTAAGAGA AGGAGTGCTGTTATGTCCCGTTTTATCCTGGGTGACTGCGTGCGTGTTATGGCCACGTTTCCGGGCAATG CTGTCGATTTCATCCTCACCGACCCGCCGTATCTCGTCGGTTTCCGTGACCGTTCCGGGCGCACCATCGC CGGCGATAAAACCGATGAATGGCTGCAACCAGCCTGTAATGAAATGTACCGCGTACTCAAAAAAGACGCG TTAATGGTGAGCTTCTATGGCTGGAACCGCGTCGATCGCTTTATGGCCGCCTGGAAAAATGCGGGATTCA GCGTTGTTGGTCACCTGGTCTTCACCAAAAACTACACATCGAAGGCCGCATATGTGGGCTATCGCCACGA ATGTGCCTACATCCTGGCAAAAGGCCGTCCACGTCTGCCACAAAACCCGCTGCCGGACGTGCTGGGCTGG AAATATTCGGGCAATCGCCATCACCCGACGGAAAAGCCCGTTACCAGCCTGCAACCGCTGATTGAGAGCT TCACACACCCGAACGCAATTGTGCTGGACCCGTTTGCAGGCAGCGGCTCAACCTGCGTCGCCGCCCTCCA GTCCGGACGCCGGTATATCGGTATCGAGCTGCTTGAGCAGTATCACCGTGCCGGGCAGCAACGCCTTGCC GCCGTGCAACGGGCCATGCAGCAGGGGGCCGCGAATGATGACTGGTTTATGCCGGAGGCTGCGTAAATGA ACTATGCAGGACACGAAAAACTGCGCGCCGAAGTGGCGGAGGTGGCCAATGCCATGTGCGACCTGCGTAC AACCATGAATGAGATGGAGCAGCGGTACAGCTTTAATGCCGACACCCTGCCGGAACGTCTGGTGCGTCAG ACGCTGTTTCGCGCAAACCGCCTCCTGATGGAGGCATATACCGAAATTCTGGAACTGGAAGCGTGCTTTA AAGATTGAGAAGGAGACGAGAATGTACGGAACATGCGAAACGCTATGCCGGGAGCTGGCAGTAAAGTATC CGGGAGACATGCCGCTGATGCTGGTTATCTGGTCCCCGGAAGAGATTCAGGCACTGGCTGACGGTATGGA AATTTCTCTGACCGGTCATGAAATCAGGACCGTCCTGGCACGCCTGGAGGACATCCCGGAAGACCAGCGG ATTGAGTCCGGTATTTCTTCCGCTGCGGTGATGGAGATTATCCGCAACGAGAGCGAAAACCGCCTGGTGA CCGTCCCTGCTGAACTGCTGGCGTCCCTGATTCAGACCGCTGAACAGGCATTGTGGAAACGTGAATGGGC CGCCCGGGATCATGGCCTCGCCGTCCCGGAATGCGTCACCCGCCGTCAGGAGGTGGTTAATCAGGCCCGC ACCCTGCTGAAAAACAACACACACGAAAACGACTGATGTTATCGCCGCCTGCCCTGCGGGCGGCGATACA GGGAGAACGCTTAATCATGAACGAAAACAGCACGCTGAACGCACTGATTTGTCGTCACGCCCGCAACCTG CTGCTGGCGCAGGGCTGGCCGGAAGAGACGGATGTTGACCAGCGTAACCCGAAGTATCCGGGCTGGATCA GCATTTATGTTCTGCTGGATGCGCCCCGGCTGGCGACGTTACTTATCAACCGTCACGGCGGCGTACTGCC GCCGCTCCTGGCCTCCGCCATTCAGAAACTGACCGG
Region Details
| Region | 1 |
| Region Length | 19.5Kb |
| Completeness(score) | questionable(90) |
| Specific Keyword | transposase,integrase,recombinase |
| Region Position | 2670-22235 |
| # tRNA | 0 |
| # Total Proteins | 23 |
| # Phage Hit Proteins | 14 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 69.5% |
| # Bacterial Proteins | 7 |
| Attachment Site | yes |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Salmon_SJ46_NC_031129(7) PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Entero_P1_NC_005856(2) PHAGE_Salisa_1_NC_017983(1) PHAGE_Entero_Mu_NC_000929(1) PHAGE_Entero_HK022_NC_002166(1) PHAGE_Lactob_Lj771_NC_010179(1) PHAGE_Escher_pro483_NC_028943(1) |
| First Most Common Phage # | 8 |
| First Most Common Phage % | 30.43% |
| GC % | 50.16% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP029225.1| Klebsiella pneumoniae strain L388 plasmid pKPC-L388. 145851, gc%: 53.75%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 27 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 2670..3134 | PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; DEO53_29825; phage(gi163932202) | 1.67e-13 | Showinfo_outline |
| 2 | 3131..3235 | hypothetical protein; DEO53_29830 | 0.0 | Showinfo_outline |
| 3 | 3328..3426 | glycosyltransferase; DEO53_29835 | 0.0 | Showinfo_outline |
| 4 | 3383..3798 | PHAGE_Entero_P1_NC_005856: InsA; DEO53_29840; phage(gi46401643) | 6.11e-62 | Showinfo_outline |
| 5 | complement(3834..4379) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29845; phage(gi100060) | 7.41e-35 | Showinfo_outline |
| 6 | 4391..4406 | attL | 0.0 | Showinfo_outline |
| 7 | complement(4445..5149) | PROPHAGE_Brucel_1330: transposase, putative; DEO53_29850; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 8 | 5219..5410 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29855; phage(gi100067) | 9.28e-39 | Showinfo_outline |
| 9 | 5660..6535 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29860; phage(gi100066) | 0.0 | Showinfo_outline |
| 10 | 6615..7538 | PHAGE_Salmon_SJ46_NC_031129: sigma factor for late transcription; DEO53_29865; phage(gi100065) | 0.0 | Showinfo_outline |
| 11 | 7595..8692 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29870; phage(gi100064) | 0.0 | Showinfo_outline |
| 12 | complement(8760..9209) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29875; phage(gi100063) | 3.77e-108 | Showinfo_outline |
| 13 | 9230..9343 | integrase; DEO53_29880 | 0.0 | Showinfo_outline |
| 14 | complement(9289..9993) | PROPHAGE_Brucel_1330: transposase, putative; DEO53_29885; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 15 | 10058..10648 | IS91 family transposase; DEO53_29890 | 0.0 | Showinfo_outline |
| 16 | complement(10815..10904) | recombinase; DEO53_29895 | 0.0 | Showinfo_outline |
| 17 | 11039..11054 | attR | 0.0 | Showinfo_outline |
| 18 | 11104..11808 | PROPHAGE_Brucel_1330: transposase, putative; DEO53_29900; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 19 | complement(11859..12476) | IS91 family transposase; DEO53_29905 | 0.0 | Showinfo_outline |
| 20 | complement(12486..12674) | hypothetical protein; DEO53_29910 | 0.0 | Showinfo_outline |
| 21 | 12748..12759 | attL | 0.0 | Showinfo_outline |
| 22 | 12766..13302 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29915; phage(gi100036) | 1.85e-20 | Showinfo_outline |
| 23 | 13485..14345 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; DEO53_29920; phage(gi100066) | 5.20e-57 | Showinfo_outline |
| 24 | 14515..15270 | 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1; DEO53_29925 | 0.0 | Showinfo_outline |
| 25 | complement(15351..15668) | sodium:proton antiporter; DEO53_29930 | 0.0 | Showinfo_outline |
| 26 | complement(15720..16424) | PROPHAGE_Brucel_1330: transposase, putative; DEO53_29935; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 27 | 22235..22246 | attR | 0.0 | Showinfo_outline |
Sequence
>2670..3134
[Klebsiellapneumoniae]
Sequence
>3131..3235
[Klebsiellapneumoniae]
Sequence
>3328..3426
[Klebsiellapneumoniae]
Sequence
>3383..3798
[Klebsiellapneumoniae]
Sequence
>complement(3834..4379)
[Klebsiellapneumoniae]
Sequence
>4391..4406
TTGGCACTGTTGCAAA
Sequence
>complement(4445..5149)
[Klebsiellapneumoniae]
Sequence
>5219..5410
[Klebsiellapneumoniae]
Sequence
>5660..6535
[Klebsiellapneumoniae]
Sequence
>6615..7538
[Klebsiellapneumoniae]
Sequence
>7595..8692
[Klebsiellapneumoniae]
Sequence
>complement(8760..9209)
[Klebsiellapneumoniae]
Sequence
>9230..9343
[Klebsiellapneumoniae]
Sequence
>complement(9289..9993)
[Klebsiellapneumoniae]
Sequence
>10058..10648
[Klebsiellapneumoniae]
Sequence
>complement(10815..10904)
[Klebsiellapneumoniae]
Sequence
>11039..11054
TTGGCACTGTTGCAAA
Sequence
>11104..11808
[Klebsiellapneumoniae]
Sequence
>complement(11859..12476)
[Klebsiellapneumoniae]
Sequence
>complement(12486..12674)
[Klebsiellapneumoniae]
Sequence
>12748..12759
GAACCGGGGCGG
Sequence
>12766..13302
[Klebsiellapneumoniae]
Sequence
>13485..14345
[Klebsiellapneumoniae]
Sequence
>14515..15270
[Klebsiellapneumoniae]
Sequence
>complement(15351..15668)
[Klebsiellapneumoniae]
Sequence
>complement(15720..16424)
[Klebsiellapneumoniae]
Sequence
>22235..22246
GAACCGGGGCGG
Klebsiella pneumoniae strain L388 plasmid pKPC-L388
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 145851 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: DEO53_29825 (Region 1)
Locus: DEO53_29825ORF Start: 2670
ORF Stop: 3134
Strand: Forward
Protein Sequence: MLSRTDARNIHWLSYWHSVIRMLKYQLKNENGWMHRRLVRRKSDMERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTSGGNFARTAGFAVSLDGVGIRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEVLGRLSTILT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DEO53_29825, MazF-like protein, phage(gi163932202), PHAGE_Lactob_Lj771_NC_010179
Homolog/Ortholog E-Value: 1.67e-13
Locus 2: DEO53_29830 (Region 1)
Locus: DEO53_29830ORF Start: 3131
ORF Stop: 3235
Strand: Forward
Protein Sequence: MNMGFEGQLDENVRFRALKPLLSHHSGDSQTLFG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29830, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 3: DEO53_29835 (Region 1)
Locus: DEO53_29835ORF Start: 3328
ORF Stop: 3426
Strand: Forward
Protein Sequence: GDAANLLICMMVFLRCSSGFCFYQLSLLFSY
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29835, glycosyltransferase
Homolog/Ortholog E-Value: N/A
Locus 4: DEO53_29840 (Region 1)
Locus: DEO53_29840ORF Start: 3383
ORF Stop: 3798
Strand: Forward
Protein Sequence: VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSRPRAYSRAVTSSSARKWTNSGDTSGLNRASAGCFTRMTGSGRRLLRTTA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DEO53_29840, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 6.11e-62
Locus 5: DEO53_29845 (Region 1)
Locus: DEO53_29845ORF Start: 3834
ORF Stop: 4379
Strand: Backward
Protein Sequence: QWDEMIRTAGSLKLGKVQASVLVRSLLKSERPSGLTQAIIEVGRINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICHGQKGEIRKRYTDGQEDQLGALGLVTNAVVLWNTIYMQAALDHLRAQGETLNDEDIARLSPLCHGHINMLGHYSFTLAELVTKGHLRPLKEASEAENVA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29845, hypothetical protein, phage(gi100060), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 7.41e-35
Locus 6: attL (Region 1)
Locus: attLORF Start: 4391
ORF Stop: 4406
Strand: Forward
Protein Sequence: TTGGCACTGTTGCAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 7: DEO53_29850 (Region 1)
Locus: DEO53_29850ORF Start: 4445
ORF Stop: 5149
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: DEO53_29850, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 8: DEO53_29855 (Region 1)
Locus: DEO53_29855ORF Start: 5219
ORF Stop: 5410
Strand: Forward
Protein Sequence: ISYNLFLLFKFDSLDSSEYRQQIKTFRLKYVFLAAKIIKTARYVIMKLSENYPYKGVYEKCLV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29855, hypothetical protein, phage(gi100067), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 9.28e-39
Locus 9: DEO53_29860 (Region 1)
Locus: DEO53_29860ORF Start: 5660
ORF Stop: 6535
Strand: Forward
Protein Sequence: MVTKRVQRMMFAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAERRRDVLASAARIIAEGL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29860, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 10: DEO53_29865 (Region 1)
Locus: DEO53_29865ORF Start: 6615
ORF Stop: 7538
Strand: Forward
Protein Sequence: MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRSAAADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: DEO53_29865, sigma factor for late transcription, phage(gi100065), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 11: DEO53_29870 (Region 1)
Locus: DEO53_29870ORF Start: 7595
ORF Stop: 8692
Strand: Forward
Protein Sequence: TRWTHHDDSGFIPYAITTGLDYEAMTEQRKGYENFVYQNGVYDLGTKGDMRRNERNLMWNLDPYIQTHWQLTSALGLDAGARYSSVWFDSNDRYVVGKNGDDSGEASYHKWLPAAALKYAMTPQWNVYLSAGRGFETPTINELSYRPDGQSGLNFALQPATNTTVEAGSKWQVGTGMASLSVFNTDTKNEIVVAASDNGRTSYQNAGKTRRRGVELGWDQQFAPAWRAKLAWTLLDATYRENAGDAIQSGNRIPGIARNSAYASFGWVPEEGWYAGAEVRYMSDIQVNDANSEQAPAYTVTALNTGYKYVLDNWTVDLYTRVDNLFDKRYVGSVIVNESNGRYYEPAPGRNYGVGLSVSYQFDSL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29870, hypothetical protein, phage(gi100064), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 0.0
Locus 12: DEO53_29875 (Region 1)
Locus: DEO53_29875ORF Start: 8760
ORF Stop: 9209
Strand: Backward
Protein Sequence: ITYVNPDFIKISGFTEEELLGQPHNIVRHPDMPPAAFEHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAYVTPIAKNGSIVEYQSVRTKPEPEQVLAAEKLYAQLRSGKAARPKLAASFSVKILLLIWGSIISSAMAAGMLTDTSISSLLL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29875, hypothetical protein, phage(gi100063), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 3.77e-108
Locus 13: DEO53_29880 (Region 1)
Locus: DEO53_29880ORF Start: 9230
ORF Stop: 9343
Strand: Forward
Protein Sequence: SKGHCCKVSDEAAFCLIQRPYISKTLLTRRISPRGSP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29880, integrase
Homolog/Ortholog E-Value: N/A
Locus 14: DEO53_29885 (Region 1)
Locus: DEO53_29885ORF Start: 9289
ORF Stop: 9993
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: DEO53_29885, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 15: DEO53_29890 (Region 1)
Locus: DEO53_29890ORF Start: 10058
ORF Stop: 10648
Strand: Forward
Protein Sequence: SEGMAMPESLSHITTESQWRSLVLKSGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGCRMVYRRAIAGLNVSGLKKNARDISLLRYMPA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29890, IS91 family transposase
Homolog/Ortholog E-Value: N/A
Locus 16: DEO53_29895 (Region 1)
Locus: DEO53_29895ORF Start: 10815
ORF Stop: 10904
Strand: Backward
Protein Sequence: MSCPIFDLRYIFMRLFGYARVSTSQQSLDV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29895, recombinase
Homolog/Ortholog E-Value: N/A
Locus 17: attR (Region 1)
Locus: attRORF Start: 11039
ORF Stop: 11054
Strand: Forward
Protein Sequence: TTGGCACTGTTGCAAA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 18: DEO53_29900 (Region 1)
Locus: DEO53_29900ORF Start: 11104
ORF Stop: 11808
Strand: Forward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: DEO53_29900, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 19: DEO53_29905 (Region 1)
Locus: DEO53_29905ORF Start: 11859
ORF Stop: 12476
Strand: Backward
Protein Sequence: MLSGFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEFGCDNPDCQHVKYLTNSCGSRACPSCGKKATDLWTATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGLEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29905, IS91 family transposase
Homolog/Ortholog E-Value: N/A
Locus 20: DEO53_29910 (Region 1)
Locus: DEO53_29910ORF Start: 12486
ORF Stop: 12674
Strand: Backward
Protein Sequence: MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVTTSILKRRGDTAALTLLQDTGV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29910, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 21: attL (Region 1)
Locus: attLORF Start: 12748
ORF Stop: 12759
Strand: Forward
Protein Sequence: GAACCGGGGCGG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 22: DEO53_29915 (Region 1)
Locus: DEO53_29915ORF Start: 12766
ORF Stop: 13302
Strand: Forward
Protein Sequence: MCSRQAAVVHLQVRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29915, hypothetical protein, phage(gi100036), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 1.85e-20
Locus 23: DEO53_29920 (Region 1)
Locus: DEO53_29920ORF Start: 13485
ORF Stop: 14345
Strand: Forward
Protein Sequence: MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: DEO53_29920, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 5.20e-57
Locus 24: DEO53_29925 (Region 1)
Locus: DEO53_29925ORF Start: 14515
ORF Stop: 15270
Strand: Forward
Protein Sequence: MNINDALTSILASKKYRALCPDTVRRILTEEWGRHKSPKQTVEAARTRLHGICGAYVTPESLKAAAAALSAGDVKKALSLHASTKERLAELDTLYDFIFSAETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTELIYLIKKNG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29925, 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1
Homolog/Ortholog E-Value: N/A
Locus 25: DEO53_29930 (Region 1)
Locus: DEO53_29930ORF Start: 15351
ORF Stop: 15668
Strand: Backward
Protein Sequence: HIRYLFSAGLSGMLLITAALLFRMLGVWMSTLGTDLSRKERLFCMIAYLPKATVQAAIGAIPLAMGLGSGETILAVAVLAIILTAPLGALGIELSYKRLLQKQQS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: DEO53_29930, sodium:proton antiporter
Homolog/Ortholog E-Value: N/A
Locus 26: DEO53_29935 (Region 1)
Locus: DEO53_29935ORF Start: 15720
ORF Stop: 16424
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: DEO53_29935, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 27: attR (Region 1)
Locus: attRORF Start: 22235
ORF Stop: 22246
Strand: Forward
Protein Sequence: GAACCGGGGCGG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download