Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1468454928 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1468454928.PHASTER.zip
gi|00000000|ref|NZ_QWDG01000002.1| Klebsiella pneumoniae strain B15 map unlocalized plasmid unnamed 75138, gc%: 49.58%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 7.5Kb | incomplete | 20 | 16 | 1097-8628 info_outline | PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) | 56.94% | Show info_outline |
Region DNA
>1 1097-8628 ATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATTCCTGATAACGCCATTGATTTCA TCCTCACCGACCCGCCGTACCTCGTCGGTTTCCGTGACCGTTCCGGGCGCACCATCGCTGGCGATAAAAC CGATGAATGGCTGCAACCGGCCTGTAATGAAATGTACCGCGTACTCAAAAAAGATGCGCTGATGGTCAGC TTCTATGGCTGGAACCGCGTCGATCGCTTTGTGGCCGCCTGGAAAAATGCGGGATTCAGCGTGGTCGGAC ACCTGGTGTTTACCAAAAACTACACATCGAAGGCCGCATATGTGGGCTATCGCCACGAATGCGCCTACAT CCTGGCAAAAGGCCGTCCACGTCTGCCACAAAACCCGCTGCCGGACGTGCTGGGCTGGAAATATTCGGGC AACCGTCATCACCCGACGGAAAAGCCCGTTACCAGCCTGCAACCGCTGATTGAGAGCTTCACACACCCGA ACGCGATTGTGCTGGACCCGTTTGCAGGCAGCGGCTCAACCTGCGTCGCCGCCCTCCAGTCCGGACGCCG GTATATCGGTATCGAGCTGCTTGAGCAGTATCACCGTGCCGGACAGCAACGTCTGGCTGCCGTACAACGG GCCATGCAGCAGGGGGCCGCGAATGATGACTGGTTTATGCCGGAGGCTGCGTAAATGAACTATGCCGGAC ACGAAAAACTTCGCGCCGAAGTGGCGGAGGTGGCCAATGCCATGTGCGACCTTCGGGCCAGGCTGAACGA TATGGAGCATCGCTGTCGCTTTGATTCCGATGTGCTTGTTGAACGCCTGGCACGCCAGACGCTGTATCGC GCCAATCGCCTGTTCATGGAGGCATATACCGAAATTCTTGAACTGGATGCGTGCTTCAAAGATTAAGGAG GAGACGAAATGTACGGAACATGCGAAACGCTCTGCCGTGAGCTGGCAGCAAAGTATCCGGGAAACACGCC GCTGATGCTGCTTATCTGGTCCCCGGAAGAGATTCAGGCACTGGCCGACGGTATGGAAATTTCTCTGACC GATCATGAAATCAGGACTGTCCTGGCGCACCTGGAGGACATCCCGGAAGACCAGCGGATTGAGTCCGGTA TTTCTTCCGCCGCTGCGATGGAGATTATCAGCAACGTGAGCGAAAACCGCCTGGTGACCGTCTCTGCTGA ACTGCTGGCGTCCCTGATTCAGACCGCTGAACAGGCACTGTGGAAACGTGAATGGGCCGCCCGTGATAAC GGCCTCGCCGTCCCGGAATCCGTCACCCGCCGTCAGGCGGTGGTTAATCAGGCCCGCAGCCTGCTGAAAA ACAACACACACGAAAACGACTGATGTTATCGCCGCCTCCGGGCGGCGATTCAGGGAGAACGATTAATCAT GAACGAAAACACAACGCTGAATGCACTGATTTGTCGTCACGCCCGTAACCTGCTGCTGGCGCAGGGCTGG CCGGAAGAGACGGATGTTGACCAGCGAAATCCGAACTATCCGGGCTGGATCAGCATTTACGTGCGGCTGG ATGCGCCCCGGCTGGCGACGTTACTTATCAACCGTCACGGCGGCGTACTGCCGCCGCTCCTGGCCTCCGC CATTCAGAGACTGACCGGAACCGGGGCGGAACTGGTACTGTCCGGCAGTCAGTGGCAATCGCTGCCGGTA CTTCCGGCAGACGGAACGCAGGTGTCTTTCCCGTATGCCGGAGAATGGCTGACCGAAGACGAAATCAGGG CTGTTCTTGATGCGGTGCACGATGCGGTACAAAGCATCTGTTACCAGGTGGCAGAAGATGCGCGGCGTAT CCGTGCGGCGCTGACCACCACCGGTCAGACGTTGCTGACCCGCCAGACGCGTCGCTTTCGCCTGGTCGTG AAGGAAAGCGATCACCCCTGCTGGCTCGATGAAGACGACGAAAACCTGCCCGTGGTGCTCGATGCCATCC TGAACCGGGGAGCACGTTTTTCGGCGGTGGAAATGTATCTGGTCAGTGAGTGTGTGGAGCATATCCTGTC CAGTGGGCTGGCCTGCGATGTGCTGCGTATACCTGATGAACCGCCCCGCCGGTGGTTTGACCGTGGTGTT CTGCGGGAGGTGGTCCGGGAAGCCCGGGCCGAAATCCGCAGCATGGCGGATGCCCTGGCAAAAATCAGGG GCTGATGATGGCGGGGATAATCCCCGCCTTTTTCCTGCCGGTCCCGGACAGAGCACAAAGGAAGTCGCCG CCGGCTCCGCTTTACCCGGCCATGCGGGCATGGCCTTATGGGGTTTCAGTTATGTGGCCTCAGCGCCGTG TGCGGGCTGTGCCGTGCCTCCATCTTAGCCGGGCTGGCGTTGATGCAAGGGTACGCTTCGCCGCTGCGGT CACCCGGTCCCTCCTTCCCGTCTGCCGTGATTTTCCGGTCGTTCGCCCGCTCAGGTTTCGCGGCCTCACC CTGCAACTCCCGCCAGCCGTGTGCGTCAGGCTGCGGCTTCCCTTGCGCCCTGTGCATCCCCGCCTTATCG CCCGGCTTTTATGGAGGCACGGCACCGCCCGGTGCCGCAGAACATGTGACTATGGAGGATTCGGGAATGT CTGTTGTTGCACCTGCTGTATACGTTGGAACCTGGCACAAATACAACTGTGGAAGCATCGCCGGACGCTG GTTTGACCTGACCACGTTTGATGATGAGCGCGACTTTTTCGCCGCCTGCCGTGCTCTTCACCAGGATGAA GCCGATCCTGAACTGATGTTTCAGGATTATGAGGGATTCCCGGGGAATATGGCCTCTGAATGCCATATCA ACTGGGCCTGGGTTGAAGGCTTCCGCCAGGCACGGGATGAAGGCTGCGAAGAGGCTTATCGTCTCTGGGT GGAGGATACCGGTGAGACGGATTTTGACACCTTCCGCGATGCCTGGTGGGGCGAGGCTGACAGTGAGGAG GCTTTTGCGGTTGAGTTCGCCAGTGATACCGGCCTGCTGGCTGACGTGCCGGAGACGGTGGCGCTCTATT TTGACTATGAGGCGTATGCGCGGGATTTATTCCTGGACTCCTTCACCTTTATTGACGGTCATGTGTTCCG TCGGTGATTTACTCCCCCGCTCCGGCGGGGGTATGGCCTGCCAGGCCGCCGGAAAACCCTGGCAGGCTTA CGCCTGCCTGAAATGCAGGAGGGCCGCGCCTGCGGCGCTGCCCTTCCTGCCCGTCATGGTGTGAGGCATT TTTCTGTTATGTCGTTTCTGTTGTTCTGATTTCCGGAGGCGGGGACACCTTCGGCTCCCGGCTGCCTGGC GGCATCCGGTCGTCAGGCCCGACTCCGACAGGCAGCTGCTGGCGCACCCGCCAGTCTCCGCCGAACCCGC TGACGCGGTTTCGGGCTGCCGCTACGGTCCGATGTCTGAAAAACCAGGCTTGCAGCGACCGTTCCGGTCG CGCCGCCCCTGTCGCGCCGTGACCTGCGCTCCCTGCACACCTGACGGTGTGTAAGGCCACTGCGCCTGAT GGCGCAGTCAACCCTTCCGCCGCCACCCCTGCGGCCTGTTTCCCGCTGTGGACTTTCCGGGGGCTGGAGT AACCACATCCCGTTTCAGCAGTCCAGGGGAAGATATACCGTCCACAAAATTTTTAGCCATAAACCCGGCA AAAAATTTTGCGTCCGCCCCCGGACAGCTGCCCCGTGACGTGGTGACGGACGCCCCATCGGAAAGGTCCA CTGCGGGGAGAAACCCCGAAGAAGTGGACGGCAGAAGGGGCTTTCGCCCCTCCGGGGAGCAACCGGTCGG CCCGGCGACCTGATTCAGCAGAAGGAGACGTTTTCATGACTGTCAGCAGCACGATTTCCGTTTTTTGCCG CGACGGGGTGTTCCGTACCGTTTACTGCCACCTGCACGGTGAGCCGACCTGGAACGGTCGCATCCTGCAT ACCCACTATGCCACCGGTCAGCAGGCCGAAGCCCTGGTTGAACACGGTGATATCCGTTGCCTCGGTCCCC GTTGCGACAAACCCGCCGGGCATACGCTTCAGAACCCGGTGGACGGTGTGACGGCTTATTACGGACGTGA CAGTGGTTTCCGGATGGACAGTGAGGCGCGTGAGTACCGTTCTTTCAGGGAGGCTATTGCCACTGAAAGC ACGGAAGAGGTGCGCTTCCATTATGTGTTCATCGACGGCTACTGGAAGGTGATGTACCGCACGCCGGAAG GCTGGAAGATGAAAGCGCTCGCGCTGGCACTGCGTCGCTGTCCGAAATGAAAAAAGGCAGGGCGATAAAC CCTGCCTCTCTCCGCCGGCGCTTCCCCGCCAGGAAGTCCGGCATCTCAATCACTATCTATGGAGATTATG CCATGAGACCATCAATTATCTTCGCAACCGCCGAGTATGTAAAGCGTCTGCGTGAAGAGTGCCTGCGGGA GAATAAACCCCTGCACCGCCATACCCGCTTCAGACGTCAGGAGCTGGCACAGGATGAGATTAACCCGGAC GTCCTGGCGATGAGCGGTCATATCGCCAGACGCTGCAGTGAGCAGAAGCGGGTACGTATCCCCGCTATGA AAGTCAGCGAATGGGGCCACCTGCTCCGCGCGCTTGAAATTGAGCGGGTCTGCCACTGATTAACCCTTGC CGTCTGCCTGTGCAGGCGGCAGGATACGTTCAGACATCTCACCAGGAGGAACCGTGAGTAAGAAGAAAAC CACCACGACGCCCACGCCGCATGATGCCGCGTTCCGGTCGTTCCTGGCGAATCCCGACGTCGCCAGAGAT TTTCTGGAACTGCATCTTCCGGCGGAGTACCGGCAGTTGTGCGACCTGTCCACGCTGAAGCTGGAACCCG CCACCTTTGTTGAGCCGGACCTGCATCAGTACGCCAGCGATATCCTCTGGAGTGTGAAAACCACCGGGGG TGAAGACGGCTATGTTTATACGCTCATCGAGCACCAGAGCACCGAAAATCTGTACATGCCTTTCCGCATG TTACGTTACAGTGTGGCGGCGATGCAGAGACATCTGGAGCAGCACAAAACGTTGCCACTGGTGATTCCTG TGCTGTTCTATCATGGTGAGCGCAGCCCGTACCCGTACAGCATGAACTGGCTGGACTGTTTTGAGAATCC GGCACTTGCGGCTAAAATATACACAAAGCCGTTTCCGCTGGTTGATATCACTGTCGTTGATGACAATGAA ATCATGAACCATCGCCGGATGGCCGCACTGACGCTGCTGATGAAGCATATCCGCCATCGTGACATGATGG AGCTGCTGGACAAACTCCCGCAGGTCATGGTGGAAATTTCAGACGAGCAGGTGCGTGTTCTGATTCATTA CATCGTTAACGCAGGGGACTCTGTATCACCGGAATTTATGCGGGCGCTGGCTGAGCGTCTGCCGCAGCAT GAGGATAAACTGATGACTATCGCAGAACGTCTTGAGCAAAAAGGTCGCCAGGAAGGAGCGCTTGAAAAAG CCCTGGCTATTGCGTGCCAGCTTCAGAAAATGGGGATGACGCCGGAGCAGATTAAGCAGGCTACCGGACT TTCCGAAGCTGAACTGAAAAAAATCATTCACTGATGAGAGCATCACAGCCCGGCAAAATGCCGGGCTTTT TTGTCAGCAGGAGCAGAGAAAACAGTATGACGCTTGCAGAACGTCTTATACAGAAAGGTTTCGACGAAGG TTTTAAAGAAGGTTTTAAGAAAGGTGCGCTTGAAGTGGCGCGGGAAGCAGCCTGCCGGCTGCGGGATATG GGCTGGACGTCGGAACGGATTCAGGAGGCGACCGGACTTTCCGGTGAAGAACTGAAAAAGCTGTTTCCTG ATGAGCAGTAGCCTGACATTCTGCCAGGCTGTGAATCACGCTCACACATTCCCTGCCGTTTCCCCCAGTT CATTTTCCAGACGCCTGATGATATCTGCCTTGCGCATCCCCTGCATGTGAGGCAGCAGGTCACGGACTGA AAGTGCCTGGGTGGTCCTCCAGACGGTGACGTCCACCTGTTCCGCATTTTCCCAGGCGTGCCATGTTCTC TGCGTCACGCCAAATTCTCTGGCCGCTTTTTCGCGTGACCATAGCATGCTTTTTCGCCAGATTCGCAGTT CCCAGCCGGTCATAAAACACCTTTGAAAAAGTGAAAAAACTTCACTTTATTTTATCATCACAATTGCCAA ATCAGCGCGATAAATAAGTGTAAAAAAGTGAAGAAATTTCACTTTTTTTGTTTGTAAATGTCGTGCGATT TTCTCTGTTTTCACCTGTGCGGGAGTGGTGTGCCAGTGACCACCACATGCCATTGTTGTGCCGTCGTTTT TCTTCAGTCGCGCCGGATGCGGCGCTCCCTGCACACCTTACGGTGTGTAAGGCCACTGCGCCTGATGGCG CAGCTGTCTCTTGCCTGTCTGCCGCCGCACTGCGGCCTGTTCTCCGCAGACGGACTTTCCGGGGGTACAT ACACGACCACATCCCGTTTCAGTCGTCCAGGGGAGAGATGTACCAGCCACAAAACTTTTTGCCGCTGGCG TCAAAAACTTTTGCGTCTGCCCCCGGACAACTGCCCCGTGACGTGGTGAGCGTCCCCCGTCGGAAAGGTC CACTGCGGGGAAATACCCTAAGACCCGGACGGCAGAAGGAGCTTCGCTCCTCCGGGAAATGACCTGGCTG ACCCGGCAGTCGTGACGATGAGGAGACAATGTGATGAATCAGACTTTACCCACTGCTGACCTGAATACTG CCGGCACGACAGATGTTATTCCGTCTGTGGCTATCGACCGCATCATCGCGCAGCGTAACGAAGGTATTAC ACTATTCATGCAGGCGATGGAATGCCTGGCGACAGCGCGCAGGATTCTGCTCGATGCGTCAGGTGATATT TTTCTTTACGGGTTTGAAGACTGCGTGACTGATTCCGTTCGTCGCATGGATAAGCCGGAAGAAGCGAAAA GGAATATCACCCGTCTTGCCGACCGGAAAATCTGGGACCGCCTGATGACAGATACGGGCATGTACACCTT CATGAGTTCATGCCAGCGTGATGAGTGGAACAGCCAGCTGATGAGCGACACCTGTCCTGAAATCACCCTG GACAATGTACTGGCAACATTCCGCCATCTTAATACCAGCAAGATGCAGACGTTTGAACAGGGACTGATTG ATGTCTACCGGAAATTGTCATGGGATTACAGAACCAATAATCCCTGCCGTCTGGGCAAGAGAATCATTAT TGAAAACATGCTGTACCGCTGGAGTAACGGGCGTGTGACGCTGGACTGCAGCGGACGGGAGGCACTGGAT GACCTGGTACGTCCTTTTTATCTGCTGGAGGGGCGCAACGTTCCTGACTTCCGGAGCAGCATCGGGGCGC AGTATGGTGAATTTCTCGGGAACGGCGACAACGTCGGTAAGCTGTTAGAAGGGGAATATTTTACGGTGCG TGGCTACCAGAAAGGGACCGTACACATTGTCTTTAAGCGTCCTGACCTTGTTGAAAAACTGAATGATATT ATTGCACGGCATTATCCTGGTGCATTGCCGCCACGAGTCTGA
Region Details
| Region | 1 |
| Region Length | 7.5Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | transposase |
| Region Position | 1097-8628 |
| # tRNA | 0 |
| # Total Proteins | 16 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 7 |
| Phage + Hypothetical Protein % | 87.5% |
| # Bacterial Proteins | 2 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) PHAGE_Rhodoc_CosmicSans_NC_028677(1) PHAGE_Entero_N15_NC_001901(1) PHAGE_Synech_S_PM2_NC_006820(1) PHAGE_Rhodoc_RGL3_NC_016650(1) PHAGE_Strept_phiARI0004_NC_031920(1) PHAGE_Aeromo_vB_AsaM_56_NC_019527(1) PHAGE_Erwini_PEp14_NC_016767(1) PHAGE_Synech_S_SKS1_NC_020851(1) PHAGE_Klebsi_phiKO2_NC_005857(1) PHAGE_Rhodoc_RER2_NC_016653(1) PHAGE_Marino_P12026_NC_018269(1) PHAGE_Vibrio_nt_1_NC_021529(1) PHAGE_Natria_PhiCh1_NC_004084(1) PHAGE_Sodali_phiSG1_NC_007902(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Staphy_Stau2_NC_030933(1) PHAGE_Caulob_CcrColossus_NC_019406(1) PHAGE_Salmon_SSU5_NC_018843(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 6.25% |
| GC % | 56.94% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_QWDG01000002.1| Klebsiella pneumoniae strain B15 map unlocalized plasmid unnamed 75138, gc%: 49.58%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 16 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 1097..1780 | PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; D1A27_RS00225; phage(gi100063) | 7.30e-29 | Showinfo_outline |
| 2 | 1781..2002 | PHAGE_Entero_N15_NC_001901: gp50; D1A27_RS00230; phage(gi9630517) | 4.83e-05 | Showinfo_outline |
| 3 | 2015..2449 | DUF1380 domain-containing protein; D1A27_RS00235 | 0.0 | Showinfo_outline |
| 4 | 2495..3271 | hypothetical protein; D1A27_RS00240 | 0.0 | Showinfo_outline |
| 5 | 3246..3762 | DUF1472 domain-containing protein; D1A27_RS00245 | 0.0 | Showinfo_outline |
| 6 | 3683..4183 | PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; D1A27_RS00250; phage(gi966199624) | 1.10e-10 | Showinfo_outline |
| 7 | complement(4323..4622) | hypothetical protein; D1A27_RS00255 | 0.0 | Showinfo_outline |
| 8 | 4644..4889 | hypothetical protein; D1A27_RS00260 | 0.0 | Showinfo_outline |
| 9 | 4912..5346 | PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: hypothetical protein; D1A27_RS00265; phage(gi414087266) | 3.51e-15 | Showinfo_outline |
| 10 | 5439..5705 | hypothetical protein; D1A27_RS00270 | 0.0 | Showinfo_outline |
| 11 | 5770..6660 | PHAGE_Sodali_phiSG1_NC_007902: transposase; D1A27_RS00275; phage(gi89886005) | 3.00e-92 | Showinfo_outline |
| 12 | 6723..6917 | hypothetical protein; D1A27_RS00280 | 0.0 | Showinfo_outline |
| 13 | complement(6948..7199) | PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; D1A27_RS00285; phage(gi374531851) | 1.29e-06 | Showinfo_outline |
| 14 | complement(7233..7430) | hypothetical protein; D1A27_RS00290 | 0.0 | Showinfo_outline |
| 15 | 7439..7655 | hypothetical protein; D1A27_RS00295 | 0.0 | Showinfo_outline |
| 16 | 7780..8628 | PHAGE_Pseudo_phiPSA1_NC_024365: DNA restriction methylase; D1A27_RS00300; phage(gi658307732) | 2.28e-18 | Showinfo_outline |
Sequence
>1097..1780
[Klebsiellapneumoniae]
Sequence
>1781..2002
[Klebsiellapneumoniae]
Sequence
>2015..2449
[Klebsiellapneumoniae]
Sequence
>2495..3271
[Klebsiellapneumoniae]
Sequence
>3246..3762
[Klebsiellapneumoniae]
Sequence
>3683..4183
[Klebsiellapneumoniae]
Sequence
>complement(4323..4622)
[Klebsiellapneumoniae]
Sequence
>4644..4889
[Klebsiellapneumoniae]
Sequence
>4912..5346
[Klebsiellapneumoniae]
Sequence
>5439..5705
[Klebsiellapneumoniae]
Sequence
>5770..6660
[Klebsiellapneumoniae]
Sequence
>6723..6917
[Klebsiellapneumoniae]
Sequence
>complement(6948..7199)
[Klebsiellapneumoniae]
Sequence
>complement(7233..7430)
[Klebsiellapneumoniae]
Sequence
>7439..7655
[Klebsiellapneumoniae]
Sequence
>7780..8628
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 75138 bps
Phages: 1
arrow_upwardarrow_upwardarrow_upward
Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: D1A27_RS00225 (Region 1)
Locus: D1A27_RS00225ORF Start: 1097
ORF Stop: 1780
Strand: Forward
Protein Sequence: MSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMYRVLKKDALMVSFYGWNRVDRFVAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAKGRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDDWFMPEAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00225, hypothetical protein, phage(gi100063), PHAGE_Staphy_Stau2_NC_030933
Homolog/Ortholog E-Value: 7.30e-29
Locus 2: D1A27_RS00230 (Region 1)
Locus: D1A27_RS00230ORF Start: 1781
ORF Stop: 2002
Strand: Forward
Protein Sequence: MNYAGHEKLRAEVAEVANAMCDLRARLNDMEHRCRFDSDVLVERLARQTLYRANRLFMEAYTEILELDACFKD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D1A27_RS00230, gp50, phage(gi9630517), PHAGE_Entero_N15_NC_001901
Homolog/Ortholog E-Value: 4.83e-05
Locus 3: D1A27_RS00235 (Region 1)
Locus: D1A27_RS00235ORF Start: 2015
ORF Stop: 2449
Strand: Forward
Protein Sequence: MYGTCETLCRELAAKYPGNTPLMLLIWSPEEIQALADGMEISLTDHEIRTVLAHLEDIPEDQRIESGISSAAAMEIISNVSENRLVTVSAELLASLIQTAEQALWKREWAARDNGLAVPESVTRRQAVVNQARSLLKNNTHEND
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: D1A27_RS00235, DUF1380 domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 4: D1A27_RS00240 (Region 1)
Locus: D1A27_RS00240ORF Start: 2495
ORF Stop: 3271
Strand: Forward
Protein Sequence: MNENTTLNALICRHARNLLLAQGWPEETDVDQRNPNYPGWISIYVRLDAPRLATLLINRHGGVLPPLLASAIQRLTGTGAELVLSGSQWQSLPVLPADGTQVSFPYAGEWLTEDEIRAVLDAVHDAVQSICYQVAEDARRIRAALTTTGQTLLTRQTRRFRLVVKESDHPCWLDEDDENLPVVLDAILNRGARFSAVEMYLVSECVEHILSSGLACDVLRIPDEPPRRWFDRGVLREVVREARAEIRSMADALAKIRG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00240, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: D1A27_RS00245 (Region 1)
Locus: D1A27_RS00245ORF Start: 3246
ORF Stop: 3762
Strand: Forward
Protein Sequence: MPWQKSGADDGGDNPRLFPAGPGQSTKEVAAGSALPGHAGMALWGFSYVASAPCAGCAVPPSPGWRCKGTLRRCGHPVPPSRLPFSGRSPAQVSRPHPATPASRVRQAAASLAPCASPPYRPAFMEARHRPVPQNMLWRIRECLLLHLLYTLEPGTNTTVEASPDAGLA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: D1A27_RS00245, DUF1472 domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 6: D1A27_RS00250 (Region 1)
Locus: D1A27_RS00250ORF Start: 3683
ORF Stop: 4183
Strand: Forward
Protein Sequence: MSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRALHQDEADPELMFQDYEGFPGNMASECHINWAWVEGFRQARDEGCEEAYRLWVEDTGETDFDTFRDAWWGEADSEEAFAVEFASDTGLLADVPETVALYFDYEAYARDLFLDSFTFIDGHVFRR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D1A27_RS00250, ArdA, phage(gi966199624), PHAGE_Rhodoc_CosmicSans_NC_028677
Homolog/Ortholog E-Value: 1.10e-10
Locus 7: D1A27_RS00255 (Region 1)
Locus: D1A27_RS00255ORF Start: 4323
ORF Stop: 4622
Strand: Backward
Protein Sequence: MAAEGLTAPSGAVALHTVRCAGSAGHGATGAARPERSLQAWFFRHRTVAAARNRVSGFGGDWRVRQQLPVGVGPDDRMPPGSREPKVSPPPEIRTTETT
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00255, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: D1A27_RS00260 (Region 1)
Locus: D1A27_RS00260ORF Start: 4644
ORF Stop: 4889
Strand: Forward
Protein Sequence: MDFPGAGVTTSRFSSPGEDIPSTKFLAINPAKNFASAPGQLPRDVVTDAPSERSTAGRNPEEVDGRRGFRPSGEQPVGPAT
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00260, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: D1A27_RS00265 (Region 1)
Locus: D1A27_RS00265ORF Start: 4912
ORF Stop: 5346
Strand: Forward
Protein Sequence: MTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQAEALVEHGDIRCLGPRCDKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFREAIATESTEEVRFHYVFIDGYWKVMYRTPEGWKMKALALALRRCPK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00265, hypothetical protein, phage(gi414087266), PHAGE_Cronob_vB_CsaM_GAP32_NC_019401
Homolog/Ortholog E-Value: 3.51e-15
Locus 10: D1A27_RS00270 (Region 1)
Locus: D1A27_RS00270ORF Start: 5439
ORF Stop: 5705
Strand: Forward
Protein Sequence: MRPSIIFATAEYVKRLREECLRENKPLHRHTRFRRQELAQDEINPDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERVCH
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00270, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 11: D1A27_RS00275 (Region 1)
Locus: D1A27_RS00275ORF Start: 5770
ORF Stop: 6660
Strand: Forward
Protein Sequence: MSKKKTTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTKPFPLVDITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGALEKALAIACQLQKMGMTPEQIKQATGLSEAELKKIIH
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: D1A27_RS00275, transposase, phage(gi89886005), PHAGE_Sodali_phiSG1_NC_007902
Homolog/Ortholog E-Value: 3.00e-92
Locus 12: D1A27_RS00280 (Region 1)
Locus: D1A27_RS00280ORF Start: 6723
ORF Stop: 6917
Strand: Forward
Protein Sequence: MTLAERLIQKGFDEGFKEGFKKGALEVAREAACRLRDMGWTSERIQEATGLSGEELKKLFPDEQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00280, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: D1A27_RS00285 (Region 1)
Locus: D1A27_RS00285ORF Start: 6948
ORF Stop: 7199
Strand: Backward
Protein Sequence: MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAGNV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00285, hypothetical protein, phage(gi374531851), PHAGE_Erwini_PEp14_NC_016767
Homolog/Ortholog E-Value: 1.29e-06
Locus 14: D1A27_RS00290 (Region 1)
Locus: D1A27_RS00290ORF Start: 7233
ORF Stop: 7430
Strand: Backward
Protein Sequence: MQGAPHPARLKKNDGTTMACGGHWHTTPAQVKTEKIARHLQTKKVKFLHFFTLIYRADLAIVMIK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00290, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 15: D1A27_RS00295 (Region 1)
Locus: D1A27_RS00295ORF Start: 7439
ORF Stop: 7655
Strand: Forward
Protein Sequence: VCKATAPDGAAVSCLSAAALRPVLRRRTFRGYIHDHIPFQSSRGEMYQPQNFLPLASKTFASAPGQLPRDVVA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: D1A27_RS00295, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: D1A27_RS00300 (Region 1)
Locus: D1A27_RS00300ORF Start: 7780
ORF Stop: 8628
Strand: Forward
Protein Sequence: MNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGITLFMQAMECLATARRILLDASGDIFLYGFEDCVTDSVRRMDKPEEAKRNITRLADRKIWDRLMTDTGMYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRHLNTSKMQTFEQGLIDVYRKLSWDYRTNNPCRLGKRIIIENMLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRSSIGAQYGEFLGNGDNVGKLLEGEYFTVRGYQKGTVHIVFKRPDLVEKLNDIIARHYPGALPPRV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D1A27_RS00300, DNA restriction methylase, phage(gi658307732), PHAGE_Pseudo_phiPSA1_NC_024365
Homolog/Ortholog E-Value: 2.28e-18
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download