Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1483878986 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1483878986.PHASTER.zip
gi|00000000|ref|NTHU02000070.1| Klebsiella pneumoniae strain B11 plasmid unnamed P17, whole genome 13469, gc%: 48.59%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 10.4Kb | incomplete | 60 | 16 | 2971-13469 info_outline | PHAGE_Entero_P1_NC_005856(2) | 49.58% | Show info_outline |
Region DNA
>1 2971-13469 TTAGACATCAAAGCGAAGCCAGCGTTCTAGCAATCCCGATTTGTTCAAAGGAACTGAGTGAGCATTTATT TTTTTACCTTCCAATATACTTTTAGCAAAGTATGTGCAATCAGGTTTGAAATGTACAGTGAGTAAGTCAG GATTAATAGCCATTAAATCAGCATCAAAAAGGCGATGCAAACATGCAAGCATCAATAATCCGTTAGAAGT ATTATTATTTCCTGTTCCAACTGGCTCAATGTGGGCGGCCTCTAGTGCTTCTCCGCTATTAGTTATGGCA CAACGATAACCAAAGTTAGCGGCCACACGCTCTTTAAAATCGTTCTGATTGGTACGGGTACGAACAATAC GATCTGCGAACAACGCTTGCTCAATAGATTCAGATAGAGCGGGAGCGTAAGAAGGAGCATTAGCAACTGA ATTTACAAGCGTTTCTACGGGATTTATAATGGTATTCGGTTGTTCAGGAGGAAGAATCACTTCTAAAGGG CGTACAGGTATTCCTGTGAGGTGTTTTGACGGCTTACAGACACTAAGAAATTCATGTGCCTCTTTTACAT CCATACCTTGTTTAGTTGCTTCTCGTTTGAAAGCATCAACCATAGCAACGGTGTACCCCTTTTCTGCAAA CAATCTGAGCCACTTATCACTAAAGGATTCTGGAGTTTTGGCAACAGGAATAGAAACAACTTCCTCTACT GATTCAGTAGACGATAATACAGGCACCCCGATTAAAAAATCAGCATTGGCAATAGGTTTTTCAATTTCTA CAATTAGCTTAGGTGTACTTATGCTTGCATGATGAACATCTCTAGCATGGTCTGCAAATCCTCCAAGCGA TTGAAAATCAACCTTGCATTCAATACATGAAATACGGCGACTTATAAGATCCGCCTCTAGCTTTTTTTGT TCGTTTTTAGCTTGAATTATTTCGTCCTGTTTCGTTTTCGCTATGTGCCAAGGATCAGACTTAATCTTTT TCTCATTACGAATAGCTCTATATTTGGATGAAAGTGATACTTTAGCCACAGGTTTACTTTTTTTGTTATT GAGTCGCTCAAGTGTTTCACGCTGAATAATATCTTTTGCTTTCTTCGTCGCTTGCTTTTTTGACAAACCA GATGCAAGAAGTTCAAGCATTATATCTGAATAAAGTAAAGGTTTATTTTTACGTTTTTGATTATTTAACT TGCGTTTTTGGTTGTAAGTTTCCATTTCTTTAGGAGTTAAATAACCTCCTACGCTACGGATAGGTGCAGG CGCAGTTAACGGTTTCTTACCGTTAATATTCTTTTTTACTTGCTCTTTGCTAACTCTAACTTTAGCTGTA GTGGGTTCTACATGGAAATCATGGCTACTATCATTTTGTTGGGTGCTGATCAGAACTTCTCTGACCTCTT CGGGAATTGGCTTACCTTCTCGGCTTGCTCTTCCCCATGCCTTGATAGCTTCTAAGCGTGTCATTTTCAT GTGAGTACCTGAAAAATCTGTAGATATGAGGAAGTATACAAATCGTTCTTATCAATCGTCTATACATGGA GGTAAGCACTGCAAAAGCTGACGGAATGAAGGCATTACCGTCATACATGAATCCAATCAAAAAGCCATAG AAACCATGCAGGTATTTGTTTGTATCCCTGCATAACGAACCATTAATTTTTAGAGCGCCTCTGGCACTCC AACTTCCGCTTTTGGCACACAGCAGCCGTTAAGATGTAAGGCCTTACGCCAACTAAATCTAATGGGACAG ATTTAGTTGGTGATGGTCAAGTAATCTGCAAACGGTCACCAAGTAAAATGCAAATGGGTAGTCAAGTCCG ATGCAATTACGCAGCCCGGCAAGGTGGGCCGATTCCCATATCGACATGTATGTAGCTTGTGTTATCCGTG GATTGTGCAGCTCAGCGGGTCGCTGGTCGTATGGCGTAGTGTCCCCCGTAACCGGCCGCGTGCGGCCGCT AACGCGCAGTACGGCGCCGCGACCCGAAGGCGGGCCGCCGTTCCCGCGCGCAGGCGCGCGGCGCCCACTG CGCACCACCGTGGGGGACGTGCGGCAGCTGCGTGGCGGCGGGCTGGGTTATGGCTTTGCAGGGAGGGGCT GGGCCGGGCGATACGGTCAGCGTTGCGGTTTCCGGCGATTTGCGGCCGGTGCCCGTTTAAGTCCGGCGTG GTCGCCTTCCATGCCCTGACGGGCATAAGAAAATAAAACCGCCATGCTGCGGTCATTCATGATTTTGTGG TGTAGCGATAAATAGTCATGCGAGAAACGTTGAAGCGCTTAGCAACTGCACCAACTGTCATTTCAGGATC AGCAAGTAAGATTCTAATTTGTTTAACATCTTCTTCAGAAAGTGACGGTTTTCTCCCTCCCACACGGCCC CTTGCGCGTGCAGCTGCAAGGCCTGAGCGCGTTCTTTCAATATTGCGGTTGCGTTCAAAGCTAGAGAATA TCGCCATCAGATGAGTATAGATTTCCCCTATAACTGGCGCATTTGTGTCTATTCTGTCCTTGATGGCTAT GAAAGTTATTCCGCGTTTCTTCAGGTCGTCGAGTAAAGTAATGACTTGACCCAATGAACCGCCGAGCCGA TCTAGTGCCCAAACTACTAGGGTATCTCCCTCGCGCAATGCTTTCAGGCAGTTCTCCAGTTCCGGCGCAC CTTTTTTGTCGCGCTTGGGGCCGCTACGTGAGGTCTGATCCTGATAGATTTGCTCACATCCAGCTTTTGT TAGTTCGTCAACCTGGTGCGCCACATCCTGAAGATGCGTAGATTTACGTGCATAGCCGATTTTCATTCTT TTCTCGCTAATTAGTTATGGGGTTATTGTTATGTTGATACAGTAACGAGTTTTGTTACATGAGGGGAGTC ATTTTTCGGGAGAAGTCAGGACTTTTCAAGACTGTCACAAAAACCATCGTTTTTGATACATTAATTTAAC CAATAGGTTGCAGATCAAATCGCCTGTAACAGCCTTTCTGGCTGTTTGTCGTTTTCAGAAGACGGCTGCA CTGAACGTCAGAAGCCGACTGCACTATAGCAGCGGAGGGGTTGGATCCATCAGGCAACGACGGGCTGCTG CCGGCCATCAGCGGACGCAGGGAGGACTTTCCGCAACCGGCCGTTCGATGCGGCACCGATGGCCTTCGCG CAGGGGTAGTGAATCCGCCAGGATTGACTTGCGCTGCCCTACCTCTCACTAGTGAGGGGCGGCAGCGCAT CAAGCGGTGAGCGCACTCCGGCACCGCCAACTTTCAGCACATGCGTGTAAATCATCGTCGTAGAGACGTC GGAATGGCCGAGCAGATCCTGCACGGTTCGAATGTCGTAACCGCTGCGGAGCAAGGCCGTCGCGAACGAG TGGCGGAGGGTGTGCGGTGTGGCGGGCTTCGTGATGCCTGCTTGTTCTACGGCACGTTTGAAGGCGCGCT GAAAGGTCTGGTCATACATGTGATGGCGACGCACGACACCGCTCCGTGGATCGGTCGAATGCGTGTGCTG CGCAAAAACCCAGAACCACGGCCAGGAATGCCCGGCGCGCGGATACTTCCGCTCAAGGGCGTCGGGAAGC GCAACGCCGCTGCGGCCCTCGGCCTGGTCCTTCAGCCACCATGCCCGTGCACGCGACAGCTGCTCGCGCA GGCTGGGTGCCAAGCTCTCGGGTAACATCAAGGCCCGATCCTTGGAGCCCTTGCCCTCCCGCACGATGAT CGTGCCGTGATCGAAATCCAGATCCTTGACCCGCAGTTGCAAACCCTCACTGATCCGCATGCCCGTTCCA TACAGAAGCTGGGCGAACAAACGATGCTCGCCTTCCAGAAAACCGAGGATGCGAACCACTTCATCCGGGG TCAGCACCACCGGCAAGCGCCGCGACGGCCGAGGTCTTCCGATCTCCTGAAGCCAGGGCAGATCCGTGCA CAGCACCTTGCCGTAGAAGAACAGCAAGGCCGCCAATGCCTGACGATGCGTGGAGACCGAAACCTTGCGC TCGTTCGCCAGCCAGGACAGAAATGCCTCGACTTCGCTGCTGCCCAAGGTTGCCGGGTGACGCACACCGT GGAAACGGATGAAGGCACGAACCCAGTGGACATAAGCCTGTTCGGTTCGTAAACTGTAATGCAAGTAGCG TATGCGCTCACGCAACTGGTCCAGAACCTTGACCGAACGCAGCGGTGGTAACGGCGCAGTGGCGGTTTTC ATGGCTTGTTATGACTGTTTTTTTGTACAGTCTATGCCTCGGGCATCCAAGCAGCAAGCGCGTTACGCCG TGGGTCGATGTTTGATGTTATGGAGCAGCAACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTT AACCCAGGATGAGAACCTTGAAAGTATCATTGATGGCTGCGAAAGCGAAAAACGGCGTGATTGGTTGCGG TCCAGACATACCCTGGTCCGCGAAAGGGGAGCAGCTACTTTTTAAAGCATTGACCTACAATCAGTGGCTT CTGGTGGGTCGCAAGACGTTTGAATCTATGGGCGCACTCCCCAATAGGAAATACGCGGTCGTTACCCGCT CAGGTTGGACATCAAATGATGACAATGTAGTTGTATTTCAGTCAATCGAAGAGGCCATGGACAGGCTAGC TGAATTCACCGGTCACGTTATAGTGTCTGGTGGCGGAGAAATTTACCGAGAAACATTACCCATGGCCTCT ACGCTCCACTTATCGACGATCGACATCGAGCCAGAGGGGGATGTTTTCTTCCCGAGTATTCCAAATACCT TCGAAGTTGTTTTTGAGCAACACTTTACTTCAAACATTAACTATTGCTATCAAATTTGGAAAAAGGGTTA ACAAAGCTATGCAATCGACGGCAAAAAGCTTCGTTCGCTTCGCGCACTACGCCTTTTCCGCGATTGATAG CGACGTTATGTGAATATTGAAATGAGCATTCCAAAGAAAGGAAGTAGAAAAATTATCGTGGGCGAAAATG AGTTTTTGTGGCTCATTAGGTCAAAACTCACATATTCGCAGGACTGTTTAGGTACAGAAATGACTGCGGT CGTTGAACCGGATGCCGGTCCTCACTGATGAAGAAGTGAACACCGTACGGGAATCGTGCCGGCAGCTTGG AGCTATCGGCCGGAACCTCAACCAGGTGGCCAGGGCCTTGAACATCGAGTTCAGGGAAAGTGACAAGCTC AAGCAAGAGGCCATCGAAAAACTGGCCGAACGGATCGACCAGCATTTGGACCATGTGTCTGAGCTGTTCG ATAAGACCTGGAGCCGGTGGCACGATTGTCATTTTCAGAAGACGACTGCACCAGTTGATTGGGCGTAATG GCTGTTGTGCAGCCAGCTCCTGACAGTTCAATATCAGAAGTGATCTGCACCAATCTCGACTATGCTCAAT ACTCGTGTGGGCTCTGTTGCAAAAATCGTGAAGCTTGAGCATGCTTGGCGGAGATTGGACGGACGGAACG ATGACGGATTTCAAGTGGCGCCATTTCCAGGGTGATGTGATCCTGTGGGCGGTGCGCTGGTATTGTCGCT ATCCGATCAGCTATCGCGACCTTGAGGAAATGCTGGCGGAACGCGGCATTTCGGTCGACCATACGACGAT CTATCGCTGGGTCCAGTGCTACGCCCCGGAGATGGAGAAGCGGCTGCGCTGGTTCTGGCGGCGTGGCTTT GATCCGAGCTGGCGCCTGGATGAAACCTACGTCAAGGTGCGGGGCAAGTGGACCTACCTGTACCGGGCAG TCGACAAGCGGGGCGACACGATCGATTTCTACCTGTCGCCGACCCGCAGCGCCAAGGCAGCGAAGCGGTT CCTGGGCAAGGCCCTGCGAGGCCTGAAGCACTGGGAAAAGCCTGCCACGCTCAATACCGACAAAGCGCCG AGCTATGGTGCAGCGATCACCGAATTGAAGCGCGAAGGAAAGCTGGACCGGGAGACGGCCCACCGGCAGG TGAAGTATCTCAATAACGTGATCGAGGCCGATCACGGAAAGCTCAAGATACTGATCAAGCCGGTGCGCGG TTTCAAATCGATCCCCACGGCCTATGCCACGATCAAGGGATTCGAAGTCATGCGAGCCCTGCGCAAAGGA CAGGCTCGCCCCTGGTGCCTGCAGCCCGGCATCAGGGGCGAGGTGCGCCTTGTGGAGAGAGCTTTTGGCA TTGGGCCCTCGGCGCTGACGGAGGCCATGGGCATGCTCAACCACCATTTCGCAGCAGCCGCCTGATCGGC GCAGAGCGACAGCCTACCTCTGACTGCCGCCAATCTTTGCAACAGAGCCTCCGTCGCCATGCTCACCTCG CTTTGGTGCACACGAGTATTGAGCATAGTCGAGATTGGTGCAGATCACTTCTGATATTGAACTGTCAGGA GCTGGCTCTGTTTGTATATAATCATGAAAAAATGGTGAGTAGAGTTTCAGGGTAACAGGGGATGCTTATG TCGGTTTTCCACAACTGGCTACTTGAGATCGCATGTGAGAATTACTTCGTCTACATCAAACGCCTTTCCG CCAACGATACCGGCGCAACAGGTGGTCACCAGGTAGGGCTTTATATCCCTTCAGGTATCGTTGAAAAACT CTTTCCGTCTATCAACCATACCCGTGAACTGAACCCTTCGGTTTTTCTCACCGCACATGTGTCATCGCAT GATTGCCCTGACAGCGAAGCCAGGGCAATTTATTATAACAGCCGTCATTTTGGTAAAACCCGGAATGAAA AAAGGATTACCCGCTGGGGTAGAGGCAGCCCACTTCAGGATCCTGAAAATACAGGGGCTCTGACGCTCCT GGCTTTCAAGCTTGATGAGCAAGGGGGGGACTGTAAGGAAGTAAATATTTGGGTATGCGCCAGCACTGAT GAAGAGGACGTCATTGAGACCGCTATTGGTGAAGTTATACCCGGAGCGCTTATATCCGGCCCCGCAGGAC AGATTCTAGGCGGACTATCTCTACAGCAAGCGCCAGTAAATCATAAATATATTCTACCTGAAGACTGGCA CCTGCGCTTTCCGTCGGGAAGTGAAATTATTCAGTATGCAGCCAGCCATTATGTGAAAAATTCCCTTGAT CCGGATGAGCAACTTCTTGACCGCCGGCGCGTGGAGTACGACATATTTCTATTGGTTGAGGAACTGCATG TTCTGGATATCATCCGGAAAGGATTTGGCTCTGTGGATGAATTTATTGCGCTGGCCAATTCTGTCAGCAA TCGCCGTAAATCCAGAGCCGGGAAGTCGCTGGAACTGCACCTGGAGCATCTATTCATTGAGCACGGCCTG CGACACTTTGCGACGCAGGCCATCACAGAAGGTAATAAAAAACCCGATTTCCTTTTCCCTTCCGCAGGGG CTTACCACGATACTGAGTTTCCCGTAGAAAATCTGCGCATGCTGGCAGTCAAGACTACCTGTAAGGATCG CTGGCGTCAGATACTGAATGAGGCCGATAAAATTCATCAGGTGCATCTGTTTACACTCCAGGAGGGAGTT TCTCTGGCTCAATATCGGGAGATGCGGGAGTCGGGTGTCAGATTGGTCGTGCCATCATCTCTGCACAAAA AATACCCGGAGGCGGTGAGAGCTGAGCTAATGACGCTAGGTGCGTTTATTGCTGAGCTGACAGGGCTTTA CGCAGATATTCCATAGATTATCTCCCGGCATAAATACCGGGAGGAGCGATCAGATTCGTTCAACCTTGCA CGAATCGGCATTAACCGCTTTCAGGATATAAGGTTCAAGCAGTTTGGCTACGGCTTCAAACACGGGCACC ACTACGGAGTTACCGAACTGCCTGTACGACTGAGTGTCTGACACAGGAATGCGAAAAGGCCTGCCATCTA CTTTTTCAAAACCCATAAGGCGCGCGCACTCTCGCGGAGTCAGCCTGCGGGGCCGATGCGCCTGATTTTC TTCGTTCGCGAAGTCTGTTTCACCTGTGGCCATATCCCAGCCACGGTCTATCAGAATTTCAGACCCGTCT TTGTGATAGCGAGCAGAAAGCGTACGGGCAATGCTTTCTTTATTTTCAGGATTAACGAGGCCAAAACCGA ATCCGTTACCCTTAGCTGCGTGCTTTTTGGCGTAGTTATAGAGATACTCCCAGAGTTTCGGCGTCAGTAT ATATTTGCTGTCAACCACGGGTTCCAGCAGTTCGCCAAATGACGGACGCTGTTCCGGATAAAAACGACTA ATATCGCGCAGGGTAAAGCCCTGGTGAATGTTCAGATCACGGCGGAAACCGACCAAAACGATACGTTCTC GGTGCTGAGGTAAAAAGTGTTTTCCGTCGATAACTTTAGGATCGTTTTTGCCCATCTCAGCTGCATCCGC AACTTCATAGCCAAGTTCGTCGAGGGTATCCATGATGACTTTAAAGGTTTTACCCTTGTCATGGCTCTTC AGGTTTTTAACGTTTTCAAGAACAAAGATGGCAGGTTTTTTTGCGCGGATAATACGCGCCACATCGAAGA AAAGCGTTCCCTGAGCCTCACATTCGAAACCATGCGCGCGCCCGAGCGAGTTTTTCTTGCTTACGCCCGC AAGGCTGAACGGTTGACAGGGGAAACCTGCTAGAAGTACATCATGATCCGGCACATGCTCATTAATGTAA GCATAGGCATCGTTTTCAGGTACTTCAGGTTTATCACTGAGCGTGACTTCCCGAATATCTAGATTGAAAG TGTGTTCCTGAGCATCGTTAAACCAGTTAGCTTTATATGTGCGCACAGCCTCTTTATTCCATTCACTGGT AAAAACGCACTGGCCACCGATGGTTTCGAAGCCCTTCCGTATACCTCCAATCCCAGCAAACAGGTCAATA AACCGGAAGGCATAGTCAGGGTGATGTGCAGGCGCTTCCGGAAGCATTTTTCGTAGAAGTTCCTCTTCGG CTAACGTCAGCGTCTTAGGTGAGCACTTACCATTAATCCAGCGATTAAGAGTCTCGCGACTCCACTCATT TTTACCAACTTTTCTAAGCAGTTCAGCCACGTACTTCTGGTCATAGATTTCCAGCACCTGCCCGAGCAGC TTTTTATCATTTTCCTGTCGCAGTTGTTCTTCCGCTTCTGCTTTCTCAAGCAGATCCTGCGCCAGTAATT CAAATTCAGACATATTGCCTCCATTGGGTCTTATGGGTGAAACTGTATCACTCATTTGACCCAGATTGAA TGTTTTTATCTGGATATTTAAACAGGTTTATTGTTAGGTAACGCACGTTGGCCACGCTGGAGCGTCTTCT GGGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTG AAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAACCTGAATCTGAGAC AACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCAT CGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGGTTCTCTTTGTCTTTTAGTG ATTCTATAAACCTCATTACGTCTGAATATAAAAATCTATTATTTGATTTATGTGGCTCATGAGGTTGTGG GATGGTCTTGTTTTTGAATGTGCCAGTTTTCTTAATGGCAAAGATTAACTCACCTTCTGTTATTCCTAAC ATTTCAGCAAATGTTTTTGCTTCTATAGTTACTGACTTCATTTAATTAACTCTCATGGTATCGATTTTCT TTACCGGCATCTTTAACAATGGTGCTCGTTTCTAGTGTTGCTGCGGTACGCTTCATCATCGTCTGCGGGG CGGTTGCGATAGTGAAGGAGCTGCCGGGCGTGAGCAAATCTATCAGGCGCTGGCCGCTGATAATCTCCAT CCGTTCACTGGCAATACTGACAGATTTTGAACCTGCGCCGGTTTTCCCGGTATGGCAAAACAGACCGCGA CAGTTATGACGTTTAAGCAACTTCTCGAACTCCTGTACGTGCTGTAAAGCAATATGGCCGCGATAGCGTT TAGCCTGAATAAGATAGCGATATTTTCCTATTATTACCTGGCCGTCAATGCCTCCATCGCCGGTATAGCG TTTGTTTCTGATGGTTCTGAAGCCATGCGCTTCAAATCCTTCCAGCAACAGTTCTTCAAACACAAAAGGA TCAATTTTCCTCAGGTAGTTAATTTTTTGGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCC CCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGG GCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAG TGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCG CTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGG
Region Details
| Region | 1 |
| Region Length | 10.4Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase,integrase |
| Region Position | 2971-13469 |
| # tRNA | 0 |
| # Total Proteins | 16 |
| # Phage Hit Proteins | 9 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 68.7% |
| # Bacterial Proteins | 5 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Burkho_KL3_NC_015266(2) PHAGE_Mycoba_Shipwreck_NC_031261(1) PHAGE_Citrob_Miller_NC_025414(1) PHAGE_Mycoba_Charlie_NC_023729(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Entero_Mu_NC_000929(1) PHAGE_Entero_RB43_NC_007023(1) PHAGE_Bacill_BCP78_NC_018860(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Salmon_7_11_NC_015938(1) PHAGE_Citrob_vB_CfrM_CfP1_NC_031057(1) PHAGE_Mycoba_Butters_NC_021061(1) PHAGE_Bacill_Blue_NC_031056(1) PHAGE_Salmon_Fels_2_NC_010463(1) PHAGE_Escher_pro483_NC_028943(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 12.5% |
| GC % | 49.58% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NTHU02000070.1| Klebsiella pneumoniae strain B11 plasmid unnamed P17, whole genome 13469, gc%: 48.59%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 16 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(2971..4440) | PHAGE_Salmon_7_11_NC_015938: hypothetical protein; CK494_026780; phage(gi345461254) | 2.54e-27 | Showinfo_outline |
| 2 | 4806..5039 | hypothetical protein; CK494_026785 | 0.0 | Showinfo_outline |
| 3 | complement(5197..5766) | PHAGE_Burkho_KS14_NC_015273: gp6; CK494_026790; phage(gi327198275) | 3.60e-47 | Showinfo_outline |
| 4 | complement(5906..6220) | transposase; CK494_026795 | 0.0 | Showinfo_outline |
| 5 | complement(6159..7172) | PHAGE_Mycoba_Butters_NC_021061: integrase; CK494_026800; phage(gi479336499) | 2.05e-12 | Showinfo_outline |
| 6 | 7328..7801 | PHAGE_Bacill_Blue_NC_031056: hypothetical protein; CK494_026805; phage(gi100007) | 3.31e-23 | Showinfo_outline |
| 7 | 8022..8288 | plasmid mobilization relaxosome protein MobC; CK494_026810 | 0.0 | Showinfo_outline |
| 8 | complement(8247..8402) | NTP-binding protein; CK494_026815 | 0.0 | Showinfo_outline |
| 9 | 8431..9195 | PROPHAGE_Brucel_1330: transposase, putative; CK494_026820; phage(gi23502708) | 3.18e-55 | Showinfo_outline |
| 10 | complement(9167..9253) | glutathione S-transferase; CK494_026825 | 0.0 | Showinfo_outline |
| 11 | 9408..10616 | PHAGE_Burkho_KL3_NC_015266: gp45; CK494_026830; phage(gi327198090) | 1.15e-40 | Showinfo_outline |
| 12 | complement(10650..12083) | PHAGE_Burkho_KL3_NC_015266: gp47; CK494_026835; phage(gi327198092) | 4.72e-132 | Showinfo_outline |
| 13 | 12182..12454 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; CK494_026840; phage(gi557307573) | 4.52e-55 | Showinfo_outline |
| 14 | complement(12465..12671) | hypothetical protein; CK494_026845 | 0.0 | Showinfo_outline |
| 15 | complement(12676..13188) | restriction endonuclease; CK494_026850 | 0.0 | Showinfo_outline |
| 16 | 13213..13469 | PROPHAGE_Brucel_1330: transposase, putative; CK494_026855; phage(gi23502708) | 4.06e-22 | Showinfo_outline |
Sequence
>complement(2971..4440)
[Klebsiellapneumoniae]
Sequence
>4806..5039
[Klebsiellapneumoniae]
Sequence
>complement(5197..5766)
[Klebsiellapneumoniae]
Sequence
>complement(5906..6220)
[Klebsiellapneumoniae]
Sequence
>complement(6159..7172)
[Klebsiellapneumoniae]
Sequence
>7328..7801
[Klebsiellapneumoniae]
Sequence
>8022..8288
[Klebsiellapneumoniae]
Sequence
>complement(8247..8402)
[Klebsiellapneumoniae]
Sequence
>8431..9195
[Klebsiellapneumoniae]
Sequence
>complement(9167..9253)
[Klebsiellapneumoniae]
Sequence
>9408..10616
[Klebsiellapneumoniae]
Sequence
>complement(10650..12083)
[Klebsiellapneumoniae]
Sequence
>12182..12454
[Klebsiellapneumoniae]
Sequence
>complement(12465..12671)
[Klebsiellapneumoniae]
Sequence
>complement(12676..13188)
[Klebsiellapneumoniae]
Sequence
>13213..13469
[Klebsiellapneumoniae]
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 13469 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: CK494_026780 (Region 1)
Locus: CK494_026780ORF Start: 2971
ORF Stop: 4440
Strand: Backward
Protein Sequence: MKMTRLEAIKAWGRASREGKPIPEEVREVLISTQQNDSSHDFHVEPTTAKVRVSKEQVKKNINGKKPLTAPAPIRSVGGYLTPKEMETYNQKRKLNNQKRKNKPLLYSDIMLELLASGLSKKQATKKAKDIIQRETLERLNNKKSKPVAKVSLSSKYRAIRNEKKIKSDPWHIAKTKQDEIIQAKNEQKKLEADLISRRISCIECKVDFQSLGGFADHARDVHHASISTPKLIVEIEKPIANADFLIGVPVLSSTESVEEVVSIPVAKTPESFSDKWLRLFAEKGYTVAMVDAFKREATKQGMDVKEAHEFLSVCKPSKHLTGIPVRPLEVILPPEQPNTIINPVETLVNSVANAPSYAPALSESIEQALFADRIVRTRTNQNDFKERVAANFGYRCAITNSGEALEAAHIEPVGTGNNNTSNGLLMLACLHRLFDADLMAINPDLLTVHFKPDCTYFAKSILEGKKINAHSVPLNKSGLLERWLRFDV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK494_026780, hypothetical protein, phage(gi345461254), PHAGE_Salmon_7_11_NC_015938
Homolog/Ortholog E-Value: 2.54e-27
Locus 2: CK494_026785 (Region 1)
Locus: CK494_026785ORF Start: 4806
ORF Stop: 5039
Strand: Forward
Protein Sequence: PARWADSHIDMYVACVIRGLCSSAGRWSYGVVSPVTGRVRPLTRSTAPRPEGGPPFPRAGARRPLRTTVGDVRQLRGG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK494_026785, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 3: CK494_026790 (Region 1)
Locus: CK494_026790ORF Start: 5197
ORF Stop: 5766
Strand: Backward
Protein Sequence: MKIGYARKSTHLQDVAHQVDELTKAGCEQIYQDQTSRSGPKRDKKGAPELENCLKALREGDTLVVWALDRLGGSLGQVITLLDDLKKRGITFIAIKDRIDTNAPVIGEIYTHLMAIFSSFERNRNIERTRSGLAAARARGRVGGRKPSLSEEDVKQIRILLADPEMTVGAVAKRFNVSRMTIYRYTTKS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK494_026790, gp6, phage(gi327198275), PHAGE_Burkho_KS14_NC_015273
Homolog/Ortholog E-Value: 3.60e-47
Locus 4: CK494_026795 (Region 1)
Locus: CK494_026795ORF Start: 5906
ORF Stop: 6220
Strand: Backward
Protein Sequence: MAVPECAHRLMRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCSRLLKTTNSQKGCYRRFDLQPIG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK494_026795, transposase
Homolog/Ortholog E-Value: N/A
Locus 5: CK494_026800 (Region 1)
Locus: CK494_026800ORF Start: 6159
ORF Stop: 7172
Strand: Backward
Protein Sequence: MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: CK494_026800, integrase, phage(gi479336499), PHAGE_Mycoba_Butters_NC_021061
Homolog/Ortholog E-Value: 2.05e-12
Locus 6: CK494_026805 (Region 1)
Locus: CK494_026805ORF Start: 7328
ORF Stop: 7801
Strand: Forward
Protein Sequence: MKVSLMAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNQWLLVGRKTFESMGALPNRKYAVVTRSGWTSNDDNVVVFQSIEEAMDRLAEFTGHVIVSGGGEIYRETLPMASTLHLSTIDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK494_026805, hypothetical protein, phage(gi100007), PHAGE_Bacill_Blue_NC_031056
Homolog/Ortholog E-Value: 3.31e-23
Locus 7: CK494_026810 (Region 1)
Locus: CK494_026810ORF Start: 8022
ORF Stop: 8288
Strand: Forward
Protein Sequence: MPVLTDEEVNTVRESCRQLGAIGRNLNQVARALNIEFRESDKLKQEAIEKLAERIDQHLDHVSELFDKTWSRWHDCHFQKTTAPVDWA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK494_026810, plasmid mobilization relaxosome protein MobC
Homolog/Ortholog E-Value: N/A
Locus 8: CK494_026815 (Region 1)
Locus: CK494_026815ORF Start: 8247
ORF Stop: 8402
Strand: Backward
Protein Sequence: MLKLHDFCNRAHTSIEHSRDWCRSLLILNCQELAAQQPLRPINWCSRLLKMT
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK494_026815, NTP-binding protein
Homolog/Ortholog E-Value: N/A
Locus 9: CK494_026820 (Region 1)
Locus: CK494_026820ORF Start: 8431
ORF Stop: 9195
Strand: Forward
Protein Sequence: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: CK494_026820, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 3.18e-55
Locus 10: CK494_026825 (Region 1)
Locus: CK494_026825ORF Start: 9167
ORF Stop: 9253
Strand: Backward
Protein Sequence: RRLCCKDWRQSEVGCRSAPIRRLLRNGG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK494_026825, glutathione S-transferase
Homolog/Ortholog E-Value: N/A
Locus 11: CK494_026830 (Region 1)
Locus: CK494_026830ORF Start: 9408
ORF Stop: 10616
Strand: Forward
Protein Sequence: MSVFHNWLLEIACENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCPDSEARAIYYNSRHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPGALISGPAGQILGGLSLQQAPVNHKYILPEDWHLRFPSGSEIIQYAASHYVKNSLDPDEQLLDRRRVEYDIFLLVEELHVLDIIRKGFGSVDEFIALANSVSNRRKSRAGKSLELHLEHLFIEHGLRHFATQAITEGNKKPDFLFPSAGAYHDTEFPVENLRMLAVKTTCKDRWRQILNEADKIHQVHLFTLQEGVSLAQYREMRESGVRLVVPSSLHKKYPEAVRAELMTLGAFIAELTGLYADIP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK494_026830, gp45, phage(gi327198090), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 1.15e-40
Locus 12: CK494_026835 (Region 1)
Locus: CK494_026835ORF Start: 10650
ORF Stop: 12083
Strand: Backward
Protein Sequence: MSEFELLAQDLLEKAEAEEQLRQENDKKLLGQVLEIYDQKYVAELLRKVGKNEWSRETLNRWINGKCSPKTLTLAEEELLRKMLPEAPAHHPDYAFRFIDLFAGIGGIRKGFETIGGQCVFTSEWNKEAVRTYKANWFNDAQEHTFNLDIREVTLSDKPEVPENDAYAYINEHVPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIRAKKPAIFVLENVKNLKSHDKGKTFKVIMDTLDELGYEVADAAEMGKNDPKVIDGKHFLPQHRERIVLVGFRRDLNIHQGFTLRDISRFYPEQRPSFGELLEPVVDSKYILTPKLWEYLYNYAKKHAAKGNGFGFGLVNPENKESIARTLSARYHKDGSEILIDRGWDMATGETDFANEENQAHRPRRLTPRECARLMGFEKVDGRPFRIPVSDTQSYRQFGNSVVVPVFEAVAKLLEPYILKAVNADSCKVERI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: CK494_026835, gp47, phage(gi327198092), PHAGE_Burkho_KL3_NC_015266
Homolog/Ortholog E-Value: 4.72e-132
Locus 13: CK494_026840 (Region 1)
Locus: CK494_026840ORF Start: 12182
ORF Stop: 12454
Strand: Forward
Protein Sequence: RTLATLERLLGLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: CK494_026840, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 4.52e-55
Locus 14: CK494_026845 (Region 1)
Locus: CK494_026845ORF Start: 12465
ORF Stop: 12671
Strand: Backward
Protein Sequence: MKSVTIEAKTFAEMLGITEGELIFAIKKTGTFKNKTIPQPHEPHKSNNRFLYSDVMRFIESLKDKENR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: CK494_026845, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 15: CK494_026850 (Region 1)
Locus: CK494_026850ORF Start: 12676
ORF Stop: 13188
Strand: Backward
Protein Sequence: MISLSPPTICNSAQKINYLRKIDPFVFEELLLEGFEAHGFRTIRNKRYTGDGGIDGQVIIGKYRYLIQAKRYRGHIALQHVQEFEKLLKRHNCRGLFCHTGKTGAGSKSVSIASERMEIISGQRLIDLLTPGSSFTIATAPQTMMKRTAATLETSTIVKDAGKENRYHES
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: CK494_026850, restriction endonuclease
Homolog/Ortholog E-Value: N/A
Locus 16: CK494_026855 (Region 1)
Locus: CK494_026855ORF Start: 13213
ORF Stop: 13469
Strand: Forward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNG
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: CK494_026855, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 4.06e-22
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download