Submission Results
Sequence Name: Not Available
GenBank Accession Number: RBLQ01000011.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: RBLQ01000011.1.PHASTER.zip
gi|00000000|ref|RBLQ01000011.1| Corynebacterium genitalium strain HSID17239 93160, gc%: 64.35%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 17.5Kb | incomplete | 20 | 8 | 1892-19419 info_outline | PHAGE_Escher_D108_NC_013594(1) | 61.05% | Show info_outline |
Region DNA
>1 1892-19419 GCGCGAAGCGCACATGGTGCCTACGCAAAACCTGCAGGTCGCCACGCTGTGCGCACCACG TGTGGCGTCAGCCACTGTATGTCGGTCTTAAAGTAAGGGCCGATGACGGGTGGAAACGCC GCTTGCGGCGTCTTCCCGCGTCATCGAGACACCTGCAGCGAGCCTGCGAGCGCAGGGTGT CTAACCGAACGGCAAGACCGACATCGTTGACGTGGTGCGCACAGCCACACCCTGCACCGT GACACCGCCGTGAGGCGGTCATTGCAGGGTGGTGAAAATCCCGCAGCGAGCTATCCGCCG CGAGGCGGTGTTGATGCTGCTGCGGGGGTAACGACACGGGCCTGATTAACACATTTCATA TCGGCCCGTGCCACAAGCACACTATCGGTGCAGACGTATCACGCTCGCGGCGGCCATATG CGCGACAGCGCATGTAACGAGCACCGCCAGCGACGTGTGTTTCGCAGCTGCAAGCTGCAG CAGATCCAGCGGCAGCTGTTGATGCAAACTCATAGCGCCGCGACTCGATAAGACTGCCCT GAGGCCACGGCTGTACGGCCCTGTGGCGGCTGTACACGCCTCGGATGGACGGAGTGCGCG TGCAGAAGAACAGTTTCGAGACGTCGCTGTTCGTCGTGTATCTGCCGAAGTCGATGTGCA AGGAGATCCCGGATTACTACACCAGCGTTGTCGACGGGCGCGAAGTGAAACGTCCGCGCT ACGTCGCGCGCGACTACGAGAAGGCGAAGCAGTACCTCGAAGAGGCAATGCGTTGGCTCG CCGAGAACTTTATCCCCGGCGGCATCGACGCAGTCGCCGGTGGGGACATGAACTTCGACG AATAACCCCGCCTGCGCTCGGATATACAACGGATTAAGTGGCAAAGAGGACCCGCTTGGC GTGACGCCAAGCGGGTCCTCTTCATTGCATTGGTCCTTTCTGGATGCCTATGTTGTGTTT GTTCTGTGAAGTGGACCGTAAATGAGCGCTTCGGTTGTGCGCTCTAGTGCCTTGTTGAAG AGCACATAGAAAGTGCGGTAAACGCGCCTACAGAATGCGCTGCGTAGTGCCTGCGTCATT TCACTGCGCAACAAACGTATTGATGAAATGACGGTGTCATTTAACTGCGCAGCAAATTGC CACTGAAGCGGTGTGTCATTAAACGTGCCATTTAGCTTGTCAATGTAATTACAATCCATT TATCTGCCCAATAGACGTGTTAATTAAGTGGTTCATCACTACACGGGACTTGACCGAGAT CCATCGCCACTGACGTCATCCCAATGGCACATAAACTGCAAGATAGCGGCAAGGAGGAGG GTTGTTTTCGCCCCAAACCCACCATTCGGCACCGCTTTCTTCTTCGCTCTTACCTACTTT TCTTCGGTAATGGTAGCGGATTATGTGAGTTACACTGCTCCATTGATCGCAAGCTTCTTG GAATGAGGAAAGAACACGGTGGCGCTGGTAGCTAGGAACACAACCCCGAACAGGATCCAC AACCCCAGCGGCATGAACGGTGTCCACGCTCCAACTCTGCCCGTGGTGACGATGTGGGCA ACGGTGGTCAGCCACAAGCCTGCCGCCACAGCCGCGAGAGTAGCCGTCAGGTAAGGAAAC AGTACCGCCCAAAACGCGGTGGCCTGGATACCCGATCGCGTCTTACCCAGCAGGTGCAGC GGAGAAAAGAAGCGCTGCAGGCTCGAGCGTTTACCGATCGTGGCGACGAGGAGGATGACG CAGATTGCCAACAACGTGTAGGCGGCCAGGGGGATGAAACCGGCGGTGCCGTCACCACTG GGGCCGTAGAACAGTTGTGTATCTTTCCCGGATCCTTCCGCCCACTTTTTCGCCGGCATC ACCGAGTAACCCTCGGGGGCCTGTGCGGAGGAGTCGGTGACAACGAGAGCCCAGTCAGGA TCGACCGGGGGATTCTCCGACACCGCGGCAGAAAGCTGCATGTAGTCGAGATGGAAGGGA TCTTCCTTGGCCGGGGCCTCGGCCCCGGAGAGGAACTCGTCGATAGCCTGAAAATTTGAC CCGGCGATCGTGTAATCGTTGGCGACCTCGTGCGAGGCGGACTCGGAACCCGAATAAGTG ATATCCGAGGGCTGCCAGTAGACAACCCCGTGGCAGGAGTCTCCGATCTGGGCGCACACC TTCTCCGCGTCCCCCGGAGCCAAAAGGCGAGCATCGCCGGTGACGATGACGGGAGCTTCG CTGACGTTTTGGGTCGTGTAATAGGCCCCGGCATCCAGCGAGGAAATAGCCCAGCTGAAC CCGGCGAGGGGGATGGCCACCAATGCAGCCGCCAACCCTGCCCTGGACAGTGTACCCGTG GCGGCAATGGAGCGAATCCCCACCGCAGGGGCGGTCCATCCGACGGTGCGACTGAGCACC GAGGAGATGGCACGGGATGCAAATCGGCTCAACGGCCCCGCCATGACCGCCGCGAGGACC GGGGTTGTCAGCACCATGACGGCCACAGCCATGCTCGACCCGCCTGCGGCAATCAGCCAC ACGCCGCAGGTGATGTTGAGTGCCGCGACGACGATGCCGGCAATTTTTCCGGCTTTCCTC ACTGCCGCGTTGCTTGCGCCTGCGGTGCTGGCCTGACCCACAACCTGGTCGAGGCGGATC GTACCGACCCCCGCCAGGTAAATAAGGCCGAGGACGATAAGTGCCGTACCCAGCACAGGC AGGGGCGCACCCCACACATCGGGCAGCTCTTTTCCCATGCCCAGGAAGAGTAGGTTCAAG AAGGGTCGGAGGATAACACGCCCGAGCACCACCGCCGACACACTGGCCACACCCGCCAAG GCCAGCGCCTGCAGAAGGAAGTGTCGCTGGAAAAATCCGTTCGAAACGCCTAGGTTCTTC ATCGTCAGCACCGTGGCCCGGTGATCACTGATGAAGTTCTGGTGCGCCAGACGCACCCCG ATGATCGTGGGAAAGATCGCGATCAAACTGACATTGACCATGCCCTGTTTGAGATCGGAA CTGCCGCCAGAGGAAAACGCGACGTACAGGATGGTTCCGACAAGCGTTCCGACTATGACG GCGGTTGCCACCAGACCGCCGATGTAGGGGCGGACAGTGGTCTTGAGCTCTCTGCGGTAC GCGGCCGTGGGGTTGAGGGACTGCATGTCACCTCCCCATTTCCAGCAGTGTGTGTGCTGC GCCGCCGAACAGCTCCCGGTGGGAGCAGTACACGACGATCGCGCCACTGGTAGCCGCGTT GCGCATAAGCGATTCAACGACGGCGATGTTGTTCTCATCGAGGGCGCTGACCGGCTCATC CATCAACAACACGTCCGGCTGGGAGGATAATGCCTGGGCAATCGCCACACGCTGACGCTG CCCTCCGGAGAGCTCATCCGGGTAGACACCGGCATAATCCGCCATACCCACATCCCCCAG CAGATCCACCTGCTGCTGCGAGTTGAGGCCGCGGCCGGCGACATTAACAGCCAGGGCCAG GTTCTCCTGGCATGTCAGACTTTCAAGCAGCGTCGGCGCTTGGGGCGCGTAACCAACATG CTGAGCTCGCCAGTGTGAAGTCTTGTTACCCGACCAACGGTCAGCCCGTTGACCATCAAT GACGACCTCGCCCGACTGAGGGGTGCGCAGACCCGCTAAAAGGTCCAGCACCGTCGATTT GCCGCTCCCCGACGGGCCACGGACAACGTATATCCCGGGCGTATTCAGAGTCAGAGAGAC AGAATCGAGAATCAGGGGAGCGTACCTGGTGTATCTAAAAGATAGGTCTTTCCAGGTGAT TTCCATCTAAGTATCCTCTTACTTTCCGTGTTTCCAACATCTATTGGGCATCTTAGTTAC ACATATCAAAGTCACCACGGTGCACGCGGATGGGACGTTCTTGCCTCATGGAAGCTTGAT CGTCTCGGCCGAAACGCTATCAATATGAACAAGCTTTTCGAGTGGAGTGGATCCGCGATA ACGATAAGGAGTTAGTGTGCATTTCCGAGAACCTGGACTTGTCTAATTGGGTTGGCAGGA TGATTGCCAACGTGATCGCTGGTGTTGCCGAAGGCGAACTCGAGACACTTACGGAGCCTG TGACGGCGGGCAAACGTGCGGTGCGTAAAGCTGGCAGGTCTCAGGGCGGGGTTGCGCCTT TCGGGTATAAGAGTGCTGAACGCGAGGGCGGTGGGCGCGAGCTAGTCAAAGATCCGAAGC AGCAAGAGGTACTCCAGTGGATTTTCCAGCAGACCTTATTTAACCGACCGATGCCTCACA TCGCCAGAGATCTCAATAATGGTGAGGTTGCAAGCATTCGCAAGGAATTCAAGGGAAAGA AAACTCAGGGTTGGCACGCAACGACGAACCAGTCGATCTTGAATAACAAGGTGTACCTGG GTTGGACGATATACCAGGGCAAGCCTGTCCTCGATGACAACGGTGAGCCTGTAAAGCGGT GCGAGCCGTCTATCACGGTTGAGGACTACAACCGAATCCAAGAGATGTGGTCGGCCAGAA CTCCCAGAACTCAAGCTCCGGCGAAAATCTCTCCGCTATAAGGCGTCATCGTGTGCTGGG AGTGCAGACGCCGAAGAAAATCTCGCGGTACGGGAAATAGCGTGTGTATCTCACTCGCAG CAGGTCGTGTGGCCTTAGGAAGAATAAGGCCAGTAGCGGAGGGCCGCCATTTCACCTCGC TGCTTCTCAGGGGTGCGGTGACCGTGCGCGCCAACAACGTTGTCGTACAGGTCGCGCCCG TCGGGTAGTTTGACATCGCCATGGGTGACAAGCTCAAATTGGAATCCGCGACGGCCACCT TGTTCTTCCCAAGTACCGGGGAGGATCTTGAACACGGCTCGAGTCACACCCCTGTGCACC GCGACGGCGTACTCGATATTGTTGCGCTCGACCCTCGCCAGATCGATTCTCCACCATGCA CAAACCGAGCATCCGATTTCCTCAAAGTGCTGCTCTCTAACAGAACTTGTCAACCACTCA CGCTTGTACCCGTACCCGTCTCGCGTTTCTTCACCCGGGATACATTCCTGCTTATCGATC CAACCTTTAAGCGTGATCAGCAGCATCGGAACTTCCGTTAGGGTGAGTTCAGGCGCGGCT TTCTCGGCGACGAGGTCGTTCAAGAGCATAATCCCATGCCCTTTTGAAGATTCGCGACGA GCGTTTGTCAGCTGATCCATAAAGCGTTCGGGTACCGGTTCGCGTTCGGATCGGACTTCG AGAGGGAATGAGTGGAGGAGATCGATGGCAGCTGCGTCTACAGCGGTGTATTCCGATTTA GTCTTCATCCCGTGCCGCAAGATCCAAATCTCGTGCTCTAAACCTGCCGCTCTGATCTTA TCGATCTTCTTGAGCTTCTCGTTCTCTTCGGGCGCGTCCCCTGATGTAGCGGCAGCCTCA TCACCGTGCGAGGAAAACCGCAATCCTTGCCCTTTACCCACGTAGAACGGCAACCCGTTA CGAGGATCGACAAGCATGTATACGTACAGTCCAAGTTCGCCAGACACCTGCTGAAGCACT GCTTTGCTTAGTGGTTCGGGGGAGAGGTCGTTAGGCGTGAGGGAGTGCTCATTCATACTA CAAATTATAGAGATTCATCGAAGGACGACCAGCTGTTCAACTTTGGCGGGCATAACGTGC GCGTGGTGCTTGATGAACGTCGAGCGCCTTGGTTTGTTCTTAAGGATGTGTGCGAGGTTC TGGAGCTTCAAGCTCCTCATATGGTGGCAGATCGACTAGAAGAACATGACCGAAGTAGTA CTTCGGTCATCGACAGTTTGGGCAGGTCACAACAGGTTACAACGGTGAACGAGTCCGGTC TGTACGACGGAATCTTCCAGTCTCGCACGGCGGGCCGATAACGGCCCACGCGCGCCAGTG CCCCGGCGCATGGACGAGCCGGAAGCTAAGCGGTTCCGACGCTGGGTTACGAACGAGCGA AATTTAGGTGCCCAACGGGAGCGAGGAGTGCTCGACCGCCGAGCCTAGCCTGAGGGGGAT TCAGGCTGCTTCCAGTATCTTATGCCAGTTCGATGGCGCAACCCGTGGAAACGACACCCA ACTGTGGCTTTAAAATCCATCACAAGCACAGTTTGACTTCTCTCATTGTTGATGCTGGAA GTGCCGTCGCACCCTCGGTGGTGCCTGCGTCTTCGTCAGCTCCCGCTTGGAAGGAACAGT CTGGAGACCTGCTCGCGAAATGCAACGCTGTCGCGATACCGGACCGCCAACTCTATGGCG GCTCCGTCCGAGGACCCTCGCAGCGTTCTAAGCTGCCAGGAGGCTCACCAAACCGCTACG AATGATCACGGGCACTGCTGCCGAATAGCCGGTTGTAACAGCGCGACCACCGAACCCACT AAGGAGACTTCACCACGCGCAAGGCCTCTGCCCCAGTAGACCCGGACGACAACAAATTCA TATGCCCGAACCGCTACAGTTGGCTCTGGGCTCCGGTAACGGTGGCGGTACCAACTACTC GGAACAGGGCAGTACCGAGACTTCGGAACACCGGTACCAAAAAGCCGCAGCCGACAAGCG AAGTACGTAGCGAAACGGCTAGTAAACAGTGCAGTAAAGCGGTGCGTAAAAAGCGCGGTT AAATGGATAAAAAATAACCCCGCAGGTTTCCCTGCGGGGTGTCGTTGTTAGAACGGTGCT TCGTCGTTGTCGGCGTCAGCGCCAGCCAGGGCGGCGTTCGCCGCCTCGCCTCCGCGACGG GCTGCGCGCGCAGCGGACTCTTTCTTGGAGTCGATCAGCTGCACGGTGTCGATACGGGCG ACCAGCGGGTAGTGCTTCACACCGTCCTTGTCGGTGTAGACGTCGGTCTTCAGCGAGTAG CTCACTGCGACACGGTCGCCGGACCCGATGCAGCCGAACACGCCGGGGTTCTTCGCGTCC TGGACGTAGCCGGTCAGCTCCACGATCTCGCTTTCCACCTTGCCGGTGGCCTTGTTCTTG AAGGTGTTGCGCGCATAGACGCTGAGCTTCACCGTCGCACCGCCGTTTGCGTGCTCGAAC AGCTTCGGTGCGCGAGCTGCGTTGCCGACGATGGTGCCGTTGTTGAAGGGGTTGGACATG ATGGTTCTCCTTATGTGGGTGGGTGTGAATTGCCGTGCAATGTGGGTACTTAAGCAGCGG CTTTGCTGCTGCGGGATGGTTGAGCTGTCCTTACAGCACTGCCCAGGGCAACGGTGTGCC TGCCGCCTCTAGGTCGCGCAGTTTTTGTGCTGCGCCCGGATCGGCGTCCTCGCCGTCGAT GCCGTCGGCGAGCTGGTAGAGCAGTTCCAGGTCGGTGTGGATGAAGTCGCGCATCACGTG CCTCCTTGTTCGGATTGATGGTCAATCCGTCTGTTGGAGACAGCTCTGCTGTCTAGGGGT CGCTCCCCTGCCTCGTTGAAGTGTCTGTTGTCGCCAGCCACGGCGATACAGCGAAAAAGA AAACCCCGTTGCATCGCTGCAACGGGGTAGGTGGTGTTACTCGGTGAACAAGATCGTGCG GGTCTTCTCGGCGCCCTCGCGGACAAGCTCGACCATCCGCTCGCCCTGGCCGATATCGGT CAGCTTCGCCACCAGCGACGGGAAGTTCTCGTCTGGCCCGATCTCGGTGGCTCGCTGCGC AGCCACGCCAGCTAGCCCCGGCTGGCCTGTGGCGTGAGCGAGCACGGCAACAGTGGCGGT GAGCTGCGAGCGCATGCCTGGCCAGCTGGTCGGGACAGCGCGCATAACCTTCTCTATGAA CGCAAGGCCCGCCTGCGGGTCATCGAGCAGTGCGGCAAGCAGCGTGTCCCGCAAGCGCGG CGTGGTGAAGCATTTCAGCGCAGACCGAACAGCGCGAGCGCTCGGCTGGGTGATCCCTGC CGCCGCCTGCTCATACTCACGCTGCAGCACGTCTGCGAACATGGGCGGGATATACGCCAG CGCGTCTTCGATGATGTCGGCGTGCTCGGCAGCGTCGATGCCGTGGTCGGTGCTGTTCAA CCGTGCCTCGATGTCGTCTTTGCTCGGCTCCGGCAGCTCGCCGGTGTGCTCTAGCATCTG CTGCAGCGCCGCTGATGCGGCGACCTCGCCGACAACACCGTGGCGCGGCTCGTCGATGAG CGGATGCTGGTACACAGACCACCAAGCAGCCCCAGTGACGATCTCGGGCACCTGCACCAC CCCGAGCAGCGGCGGTAGGTGCACTGCCCCGCTGGTGAGGTACGTGGCCGTCTCGTCGAA GACCGGCTGCGCAATGTCATCGCTGATCATGTACGCGATAACAGCGTCGAGTTCGAGGTG GTGGACCCACGCTGCGAACCGCTCGCGGCTCTCGGTGAGCTTCTCCACTGCTTCGTCCAG GTCGAACCGTGCGACCGGGCCGAGGCGGACGGTGTCGACGCCCTCGTCGTCGACGAAGAA CGCGAGGATCAGCGAGTTGTTCGGGTAGAACCCGAGGATGCCGGGGAGGTTCGCGAGGAT CTCGCCGTGGGATGCAAGCGTGTGAGAATGGGTGGACATGGCAGTGCTCCTTTGCACGAA TACGGGGTGTATGTGGTCAATCCCGTATTCGGCCCGGCTCTGCCGGTCGCGCCCTGCCAC GGCACCACCGCACCTGAAGCGTGCTGAGCGTCGCTAGCGCAGCCTGATGCTCGCTCGCTG GGTGCGAGCGCTAGCGACGCAGCCTGTGATTAAGCGTCGGCTTCGATGCGCTTGAGAGCG CGATAGATCGTCGGCCGCGAGACGTTGAATGTCCTGCCTACTGCGCTGAGGGACTTGCCG CCCTCGATAAGCTCCTTAGCGATCTGGGCCTGCTCAGCGCTGAGCTTCGGCTTCGGGCCG GCGACCCTGCCCTGTGCGCGGGCGTGCGCCACGCCTTCACGGGTGCGCTGGACAAGCAGG TCACGCTCCCACTCGGCAAGACTTGCCATGACGTTGATGACCACCTTGTCGGTGGGCTTC GACGTGTCCAGCGCTGGCTCCAACACCTTGACGTTGATGTCGCGCTCGGCGAGGTCAGCG ATGGTGTTCACGGTGTCCGCGAGGCTGCGGCCGAGCCTGTCCAAGCGTGTGACAACGAGC GTGTCGTCGGGGCGCATGTACGCCAGCGCGTCATCGAGGCCAGGCCGTTGCCATTTCGTG CCGGAGATGGTGTCTGAGTAGATGTGCTGAGGGTCGCAACCAGCGTCGATCAGGGCGTCG CGCTGGGTGTCGAGTGACTGCCCCTGCTTCGAGGTGGAAACGCGGGCGTAACCGATGAGC ATGGTTAGTCACCTGCTCCTATGCGTTACCTTTGGCACGGTTGTGGGACTTGCAGAGCAG CTCGCAGTTGCTTTCCTCGGTCTTGCCGCCCTTCGACCAGGCGGCGACGTGATCGGCGTC CATATCCTTGAGCGGCCAGATCTTCGCCTTGCCCCCCTCGTGACCGAGGGCGCAATACGA GCAGTTCGAGACACCGTTCTTCTCGGCGGCGTCTGTCTGGCGCTTGTACACGCGCTTTTT GACGGCCTCAGTGAAGACACGCACGCTAAGCAGCCGCGTCTCTTTCTTGCCGCCGAGAAG GTACTCGTAGATACCCTTCTTCGACTGAACCTGCGAGTCGGAAAGCAACTCGCGTGCTTC GGCGGTCATCTCTGTTGCGTCGTAGCCCTTGTCGCCGTACTGCTCATAGAGCTTGTTCCA TGCGATTCCACGCATGGAACTGTCCGTCATCTTGAACACGCTTGCGGCCCAGTCGATGAC GGTGGTGAAGTACGTCTGCAGTTCATTGCAGTCGTCGTCATCGCGGTGCTTAGCCATGTA GTTGTCGATACTCACGCCGTCACGCTGAGCGATCCAGTCGAGGGCGACTTCAAGCACCTC CTGGCGGGCGGGTTCACCGCGCACGAAATTCGACCACTTCGACATCAGTCGCCAAGAAGT CTTCCGGTGGTGCATGCGCTACAACACCCGCAGACGGCACTCCTGGTGCAACGTTCTAGC CCCCAATGACTTCGAAGCACTCACATCAGCTACGCTGACCCAAGCAGCATAGCTAACCCC CGACGTGTCTACTTTCCGGGGGTCAGGCCCGTGCTCGACAACCCCAGCGGACTCAACGCC CACGCCAGCGTCGCGGACCATGCGGCCGGGTACCGGAAGGTGGCCAAGGCCGCGGGCATC GCGATTTAATCCCGCGCAGAGCCGGAGACTGTGACCTGGCGATCATTGATGCGCAAGGTG CTGTCAGCAGCAGCAATAACTGCGGCATCGTGCGTGGCGGCCAGAACGAGTGCGCCCCCG TCCGCAGCTCGCCGCAGGAGCGCGATAACTTGGTCGCGGTTAGTGGGGTCGAGGGAGGCG GTCGGCTCGTCAGCGAACACATAAGCCGCGCCGCGGAGCAGGGCTCGGGCGATCGCCAGC CGCTGCTGCTCGCCTCCGCTGAGAATAGCTGCCGGCCCGTCGAAGGGGACATCAAGACCG ACTTCGCCGAGGGAGTGCAGCAATTCTTCTTTGGAGTATTGCTTCCTGGATAGCCCGAGG GTGAGGTTATCTTCGCAGCTTAGTTCGGGAATGATTCCGTGGTCTTGGTGGATTATCGCT GCGCGTTCTCGCCAGAACCTCCGCCTCCGCTTCATCCTCCACGCGGAGGCATTCTCACCG TCTATCCGGAGGAGGCCGTCCGCCGGCGGCAGGAGCCCGGCCAAGGTGTTGAGCAGCAAA GTCTTTCCGGAACCGCTGGCTCCACAGATGGCGACAAAGCCTGGCCCGGGTAGGGAAAAC GTTGCATTTTCCACGAGGGACTTCTTCACCATCCGCGTGCTGCGCCCCACAGAAAAAGTC GACTCCGCGGCGAGACAGAGATGAGAGGTGGAAATCTCCGGCGGCAGAGTGGGGAACTGA CTGGGGCTAGCCAATGACATTGTGACTCCTAGGGGAGGCGGACATGTGCTGAGAAATACT GAGACGGACAAAACCGAGGTAGACGATTAAGACAAGGCAGCTTAGCGCGGTGAAGGTGTA GAGGAACGGGTTGGGAAGCAGTAGCGGAGCCAGGACGGACAATATGACGACAACTGTCAG GCTGACCAGTTGGCTTTTGAATAGTCGCCACATCGTTTTGTCCGGTGATTGCCCAGCGCT GTGGAGGAGTACCAGGAGGCGACGGTGAACTCGGAGCTGGATGCGCGTCTGGACTATCAA GGCCGCAAGCGTGGCGAGCAAAGCTCCGAGGGCGCTCAGGATACTCAGCCAGAACAGCGC CGTGCTGGCTACTAGTTCGGCCAGACCGCGATCGGCGGCGCGTACCGGGTAGACGTAGCC TTCGAGGCCGGCAGCGGTAAGTTCTGGACCCAGTTCCGAGAAATCCGCGAAGAGCAAATT TTTACTCGAAGCTGTGGAGCTTAGGAAGTCTGCGTCGAAGCCGGATAGATCGTCCGTTTC AAGCACGTAAAAACAATCGCCGGGAACCAGTTCCCCCGACATTGTTCCACTAATGAATCC GACCGCATGATCGGCACTGACCGGACCAATTTGCGCAGATTTAAGGAGCAGGTCGCCGGA TTCCTGAGCCCACAGATCCACGGAAGCTGCGAAATGCTCTTGGGCTGCGGAATAGTCGAC CGAGTGGTTGTCGTCTCCGGGACGGAACTGATAATCCTGCAGATCGTGCCATTGGCGGTT GGCAAGTGCCACGGGGCAGGAGTCCGGCACACCGGTAGCTTCTTTCGGCAAAGTATGGCT GAGGACAGCCCCGTGCTCCCGTTCCCAGCTGAGCGCGAAGTCGCGGAAGTTCTGCTGCAC ACTGGGCGGCAAGAGCTCGCCTTCTTCCACGCGGCCAGCAGGGCCGTCGAAGTTGGCTGA AAAATGCAAGGCTCCAAACTCCGCGAGAGATTTCCAGGTCTGTTGGGCCTCGGATTCCTG CTGGTAGGAGCGGAGCGCAGCCGCTGAGCTAAGACCCGCTGCTACAAAGGTCACGCAGGT AAAGACCGAAATTACTTTCAGCGCTTTTCCCGCCGCCTTCTCTGCGGGGGCACGCTGCCC CAGCAGCGCTACTGCGCGGCGCAACAAAGGGGCGGTGACGGCTACGGCCAAACCGGTGGT AGCCAGGGCCAAGCCTATCCCGGCGGCGTAGAACCTGAGGAACAGGAGGGCAAAAGAATA GCTCCCTTGGCGGGCGAGGAATGTACTCGCAAGGCCAATGAGAACTAGGTGCGGGAGGAT GACAAAGATCCATTGCCGCCAATTGCCTTTTTGACTGCGGTGCCCGCCATTTATTGTGCG CAGCGCTGCCAATCTAAGACCGGAAACCCGAAGAACAAATACCAGGGCAAAAAGGGAAAC GACAAATAGAAACAGGATCGCCACCAACGCGGGCAGGCGGAATACGACCGATTGGATGAG GTGAAGGAACTGCGTCTTTTCGCTTAGCCTGAGCCCGTCATTCCTGGCCGATTCGTAGAA GTGGTTCGCATTGCCACCCGTTGCTTTGGGAACCAAGACGTAGTCACCGTGGTAATCCAG CGACCCAAGCTCACTGGCCGCTTGGCTCAAGGCATCCGGCCGGTTGAGCCGGGGAATGCG TTCCGGTGCTGGATAATTTTGCTCCAGCGGGATGAAAACCTCGTGGGAAGTCCCGCTTGC GTCATCGGTGCCAGTCAGCCGGTAGATGAAGTAGCCGTTCTGCTCGGCCAATGAAACCAG TGAGTTACGGATTACCGTCGGTGCGTAGTCTGACTCAAGTTCCTCCGCGAGTGAAGTCTT AGGCTCGACGTAGTCAAGACTAAAGGTTGATTCGACCCCTAAGGACAAGGGCTTGGTGGA GTCAACCAGGGCTGTCAGCAGCCACCCAGTAGTCGCGATGACTGCAGCAAGAAGTAGGCT CAAAAGCCCAAGTACTAGGGGTCGAATGCGCATGAGTTCTAGCAGAAGTCGTAGTAGTAG CTGTCCTTAGTGCCCGGCAAATTCGTTGCCCAAAGCTCGGCGATCGACTTCTGGCCGCCG CGGGTGTTGATGCTTCGTTGCGTTCTGTCGTTGACGGTCACAGTCGAAGTATGGCACCGA TTCACGGTGAAATAAGAACGCGCCTTAGCGTTCCAGAATCCGTCGATCTCGCCGCGCTCA AAGGACGCCACCATCGCGTCGTAGTCGGGACGGTCCACGTCCTTCTTTGATGCAGAGATC GATTGATCGACGTAGGTATGCACGACGTCCCAGCCGCGTTGCTCGGCGAGGGCTTCGCAG TCCTGACGCTGCCGGTCGATGGCGAGGCCGTCCATGGCAGCATCTAACGAGATACGGAGG TAAATAGCAGCGCGTGTAGTCATACGCTATTCATAGCGTATTTAGGTTACATTGAAACGA AACTCGACGACGTCGCCGTCGGCCATGACGTAGTCCTTGCCCTCCTGGCGGACCTTGCCG GCGGCGCGGGCGTCGGCCATAGAGCCGGCCGCGTCCAGGTCGTCGAAGCCGACGATCTCG GCCTTGATGAAGCCCTTTTCAAAGTCGGAGTGGATCACGCCGGCGGCCTTCGGGGCGGTG TCGCCCTTGCGGATCGTCCAGGCGCGGGCCTCCTTCGGTCCTGCGGTGAGGTAGGTCTGC AGGCCGAGGGTGTCGAAGCCGGCCTTGGCCAGGGTTTGCAGGCCCGGTTCGTCCTGGCCG ACGGCGGCGAGGAGCTCGGCGGCGTCTTCGTCGTCAAGCTCGAGCAGCTCGGTTTCGGTC TGGGCGTCCAGGAACACCGCCTCGGCGGGGGCGACCAGGTCGCGCAGCTCCTGCTTGCGC GCGTCGTCGGTGAGGACGTCCTCGTCGGAGTTGAACACGTAGAGGAACGGCTTCGCCGTC ATCAGGTGAAGGTGGTGCAGCAGCGCAAGGTCCACTTCCCCGCCCTTGGAGGCGGCGAAG AGCGTGCGGCCGTCTTCGAGCACGGCCTGGGCCTTCTTGGCCTCCTCGGCCTGGGCGGCG ATGTCCTTGTCCTTGCGGCCGTCCTTTTCCAGGCGCGGCAGGGCCTTTTCAATGGTCTGC AGGTCGGCGAGGATCAGCTCGGTGTTGATGACCTCGATGTCCGAGGACGGGTCGACTTTG CCGTCGACGTGGATGACGTTGTCGTTGGAAAACGCGCGTACGACCTGGCAGATCGCGTCC GCCTCGCGGATGTTGGCCAGAAACGCGTTGCCCATACCTTCGCCTTCGGAGGCGCCCTTG ACAATGCCGGCGATGTCTACGAAGGACACCGTGGCGGGCAGCACGCGCTCCGAGTCGAAG ATTTCCGCCAGGCGGTCCAGGCGCGGATCCGGCAGCTCCACCAGACCCACGTTGGGCTCG ATGGTGGCGAACGGGTAGTTCGCGGCAAGCACCTCGTTGCGCGTCAGGGCGTTAAACAGG GTGGACTTGCCAACGTTGGGCAGACCGACAATTCCAAGAGTAAGGCTCACGTCGCAACAT CCTAGCGGAGGCTTGCGCGAGGTTCGGAGGGGGCCGTGAGGTGGGCCGTCGCAAAGCAAA ATGCAATGGGGCACAATGGTGCGCGTGAGTGAACCGATCCAGACCCCCGTGCGCGACGAC CGCGTGGACCGCAACGTTGTGTTCAACGACTGGATCGCTTCCGCGGCGAAGTTCACGCTG CGCATCCTGGTCATCGCCGTGTTTTTGTACGCGGTGGGCCAGCTCATCGGCGCGTTTTGG GCAGGCATTTTGCCGGTCGTGCTCGCGCTCATCGTGTGCACCGTGCTCGCCCCCATCGCA GCTGCCTTACGACGCCACAGGGTCCCCTCCGGCCTCGCAGCCCTTCTGACGATGCTGTTG TTCTTCGGGGTGCTTGCGTTTATCGGCATGCTCATCGCCCCCGACCTGGTGGGGCAATCG CGCCTGTTGTACATCCAGGCGTTCGAGGGCATTCAGCGCCTGCAGCTGTGGGCGCAGGGC CCGCCGCTGAACATGGACCCGGAAAACCTCAACGAGGGCGTCAACGAGATCCAGCGGTGG ATCCAGAACCAGGCGGGCGCGATCGCCGGCGGGGTGTTCTCCGGCATCAACACCGCGGCC GGGCTGTCGGTGACGCTGATGGTGCTGTTCGTGCTCACCTTCTTCTTCCTCAAGGACGGC CACCGCTTCCTGCCGTGGCTGCGCTCCGCCACCGGCGGCCGCACCGGCCTGTACCTGACG GAACTGCTCACCCGCGCCTGGAACACCCTGTCCGGCTTCATCCGCGCGCAGGCGGTGTGC TCCCTGGTGGACGCGATCATCATCGGCACCGGCATCGCGATCGTGGGCGTGCCAATGGCG TTCACGCTCGCGCTGATCACGTTTGTGGCCGGCTTCATCCCGATCGTCGGCGCCGTGGTG GCAGGCGCGTTGGCGGTGCTGATCGCGCTGGTCACACTCGGGTTCACCAAGGCGTTGATC GTACTGGCGATCGTGCTGGCCACCCAGCAGCTGGAGGGCAACGTGCTCTCCCCCATGCTG CAGTCGCGCGCGATGAACCTGCACCCGGTGATCGTGCTGGTCTCCGTGACCGTCGGCGGC GCACTGTTCGGCCTTGTCGGCGGTTTCTTCGCGGTGCCGGCTGCGGCGATGGTCGCGGTG GTGTACCGCTACCTGCTGGAGGTGCTGCGCATCAACGCCGGCGAGCTGGGAGCGCACGAC ATCGAGTTCGCCACCGACGAGGGCCGCGTCATCGCGGAGATCGTGGAGAAAGAGTCCGTG CACAAACGCCAGGAGTGGCGCGGCGAGCGCGAATGGGTCAACGCGCCCGTGGCGGACGAG GAAACAGACGAGCGCACCGAGCGCTTCGGCACCTCCAGCCTGCGCAAACTGCGCGACAGT GGCCTTGAACGGTTGCGCGGGTGGCAGTCCGGCGACAGCAGCAAGGACACCCCAGGCGAA CATATGAGCGAACCCGAGCGTTAGCGTGTCGGGCGGGTGTGGTTGACTGCCAGCTATGTC GACCGCCACCGTGCTTTTGCTCCTCGCCACCGGCTTACTCGCGGGCTTCATCGCCGGCGT GTTCACCGGCGCCGCCTGGATGCGCCGCTCCACCCCGCAACAGCCGCCGCAGGACCTGCG CCCAGTCGCCCGCGCGCTGAAAGACATGCGCGAGCAGCTCGAAGAGATGGACAAGCAGCA GGCCGTCTCCGCGTCCTCGCTGGCGGGCCAGGTCCAGGCGATCGGGCGCACGTCCGCACG CTTGGGCGACCGCACCGACCAGCTCATCACCGCCCTGCGCTCCCCGCAAACCCGCGGCCG CTGGGGCGAAATCCAGCTCGAGCGGGTGGTTGAGCTCGGCGGCATGCTCGAGCACGTCGA CTTTGACACCCAGGAGCACATGCTTATCGACGGCTCACGTGTCCGCCCCGACATGATCAT CCGCCTCACACAGGGCCGAAACATCGTCGTCGACGCGAAGGTGCCCTTCCAGGCGTATTT GGATGCGCTCGGCACCGAGGACCCGGAGGAGCGCCAGGCGTTCATGCGCCGCCACGCCCA CCTGGTGCGCGCGCACGTGGACACCTTGTCGGCGAAGTCCTACATTGAGGCGTTCCAGCC CACCCCGGAGTTTGTAGTGCTGTTCGTGCCGGCGGACCCGTTTCTGGACGCCGCGCTTTC CATCGACCCTGAGCTTCTGGATTACGCCTTCGCCCGAGACGTGGTCATCGCCACCCCCAC CACCCTGTTCGCGCTGCTGCGCACTGTGGCGCTGGGGTGGCGGCAGGAATCGCTGAACCA CGCAGCGAAGGAGATCCAGCGCCTGGGCGGCCAGCTGCACCAGCGCCTCGCCACCATGGC GGAGCACTACAACCGGGTCGGCGCTTCGCTGGACAAGGCGGTGGAGGCGTACAACGCCAC GCTGGCGTCGATGGATTCGCGCGTGATGGTCACCGCCCGCAAGCTCGAAGAGGCGCAGGT GCCGTCGCGGCGCGGCGAGGCCCCGGCACTGAAACCGGTCTCTTCGCGTGCCCGGCACGC CGCCGAGAACACCGGGGAGTAGACTCGTCTGGCGTGTCGCATGTCTCTCACCGGAACTCA ACCTCCCCGTCCGCAACGTTTCACGGGTTGCCCACGGGGTCCGGCATTGGCATCGTTTTC GCCGCGCTGTTTACTGGCGCGCTGCTTTCGCTGTCCACCGGCGTGATCGGCTGGCCGTTT CTGGCCCTCTACGCCGTCGCGGTGATTGTGGTGTCCACCCTGGTCAATCCGCGCGGCCTG TTCCTCAACGTGGCAAGCGCGCCGATCCTGTTCGTTACCGCGGTGGTCCTCGCCGGCTGG GTGATGTCGCGCAACGAGATCGCTGCCGGCGGCGCCTCTGGCAAAGCCGCCCTGCTCCTG GTGTTTTACCCGGTCACCGAGCTGTTCCCGGTGCTGTTCGCCGTCACGCTCGGCTCGGTG ATCATCGCGTTCGTGCGCATCCGCCTGATCAAGCGCCACAACGAACAGCTGGTGCGCCGC GAAACCGCTGAGCGCACCCGGATCAACCGCAGCAACCGCCGCACGAATTCTGAAGGTCGC CGCGCCCGCGAGCGCGCCAAGGCCGTGTCGGTGGACGAGCTTTTGCGCCGCGCGGATACG GAACGCAG
Region Details
| Region | 1 |
| Region Length | 17.5Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | integrase |
| Region Position | 1892-19419 |
| # tRNA | 0 |
| # Total Proteins | 8 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 87.5% |
| # Bacterial Proteins | 1 |
| Attachment Site | yes |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Escher_D108_NC_013594(1) PHAGE_Propio_BruceLethal_NC_031084(1) PHAGE_Mycoba_Babsiella_NC_023697(1) PHAGE_Mycoba_LittleCherry_NC_022086(1) PHAGE_Mycoba_George_NC_042312(1) PHAGE_Lactoc_bIL285_NC_002666(1) PHAGE_Entero_Mu_NC_000929(1) PHAGE_Lactoc_Tuc2009_NC_002703(1) PHAGE_Plankt_PaV_LD_NC_016564(1) PHAGE_Propio_PA1_14_NC_028694(1) PHAGE_Pseudo_OBP_NC_016571(1) PHAGE_Mycoba_Iracema64_NC_028687(1) PHAGE_Entero_Arya_NC_031048(1) PHAGE_Salmon_Fels_2_NC_010463(1) PHAGE_Mycoba_HINdeR_NC_021308(1) PHAGE_Mycoba_Arturo_NC_042339(1) PHAGE_Bacter_Sitara_NC_028854(1) PHAGE_Paenib_Xenia_NC_028837(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Bacter_Rani_NC_029084(1) PHAGE_Paenib_Shelly_NC_041909(1) PHAGE_Entero_SfMu_NC_027382(1) PHAGE_Escher_pro483_NC_028943(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 12.5% |
| GC % | 61.05% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|RBLQ01000011.1| Corynebacterium genitalium strain HSID17239 93160, gc%: 64.35%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 10 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 1892..1904 | attL | 0.0 | Showinfo_outline |
| 2 | complement(5039..5677) | PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; D8M31_09050; phage(gi371496158) | 1.36e-26 | Showinfo_outline |
| 3 | 5833..6432 | PHAGE_Mycoba_HINdeR_NC_021308: integrase s-int; D8M31_09055; phage(gi508179939) | 2.00e-37 | Showinfo_outline |
| 4 | complement(6526..7410) | PHAGE_Pseudo_OBP_NC_016571: putative homing nuclease; D8M31_09060; phage(gi371671534) | 5.60e-12 | Showinfo_outline |
| 5 | 7504..7879 | PHAGE_Paenib_Xenia_NC_028837: antirepressor; D8M31_09065; phage(gi971748197) | 4.07e-21 | Showinfo_outline |
| 6 | complement(8539..8970) | PHAGE_Entero_Arya_NC_031048: RecA-like recombination protein; D8M31_09070; phage(gi100035) | 9.01e-06 | Showinfo_outline |
| 7 | complement(9368..10390) | DUF4192 domain-containing protein; D8M31_09075 | 0.0 | Showinfo_outline |
| 8 | complement(10561..11133) | PHAGE_Escher_pro483_NC_028943: DNA invertase; D8M31_09080; phage(gi971758535) | 3.27e-45 | Showinfo_outline |
| 9 | complement(11150..11776) | PHAGE_Propio_BruceLethal_NC_031084: ssDNA binding protein; D8M31_09085; phage(gi100044) | 7.36e-05 | Showinfo_outline |
| 10 | 19419..19431 | attR | 0.0 | Showinfo_outline |
Sequence
>1892..1904
GCGCGAAGCGCAC
Sequence
>complement(5039..5677)
CorynebacteriumgenitaliumMEITWKDLSFRYTRYAPLILDSVSLTLNTPGIYVVRGPSGSGKSTVLDLLAGLRTPQSGEVVIDGQRADRWSGNKTSHWRAQHVGYAPQAPTLLESLTCQENLALAVNVAGRGLNSQQQVDLLGDVGMADYAGVYPDELSGGQRQRVAIAQALSSQPDVLLMDEPVSALDENNIAVVESLMRNAATSGAIVVYCSHRELFGGAAHTLLEMGR
Sequence
>5833..6432
CorynebacteriumgenitaliumMEWIRDNDKELVCISENLDLSNWVGRMIANVIAGVAEGELETLTEPVTAGKRAVRKAGRSQGGVAPFGYKSAEREGGGRELVKDPKQQEVLQWIFQQTLFNRPMPHIARDLNNGEVASIRKEFKGKKTQGWHATTNQSILNNKVYLGWTIYQGKPVLDDNGEPVKRCEPSITVEDYNRIQEMWSARTPRTQAPAKISPL
Sequence
>complement(6526..7410)
CorynebacteriumgenitaliumMLQQVSGELGLYVYMLVDPRNGLPFYVGKGQGLRFSSHGDEAAATSGDAPEENEKLKKIDKIRAAGLEHEIWILRHGMKTKSEYTAVDAAAIDLLHSFPLEVRSEREPVPERFMDQLTNARRESSKGHGIMLLNDLVAEKAAPELTLTEVPMLLITLKGWIDKQECIPGEETRDGYGYKREWLTSSVREQHFEEIGCSVCAWWRIDLARVERNNIEYAVAVHRGVTRAVFKILPGTWEEQGGRRGFQFELVTHGDVKLPDGRDLYDNVVGAHGHRTPEKQRGEMAALRYWPYSS
Sequence
>7504..7879
CorynebacteriumgenitaliumLFNFGGHNVRVVLDERRAPWFVLKDVCEVLELQAPHMVADRLEEHDRSSTSVIDSLGRSQQVTTVNESGLYDGIFQSRTAGRRPTRASAPAHGRAGSAVPTLGYERAKFRCPTGARSARPPSLG
Sequence
>complement(8539..8970)
CorynebacteriumgenitaliumMSNPFNNGTIVGNAARAPKLFEHANGGATVKLSVYARNTFKNKATGKVESEIVELTGYVQDAKNPGVFGCIGSGDRVAVSYSLKTDVYTDKDGVKHYPLVARIDTVQLIDSKKESAARAARRGGEAANAALAGADADNDEAPF
Sequence
>complement(9368..10390)
CorynebacteriumgenitaliumMSTHSHTLASHGEILANLPGILGFYPNNSLILAFFVDDEGVDTVRLGPVARFDLDEAVEKLTESRERFAAWVHHLELDAVIAYMISDDIAQPVFDETATYLTSGAVHLPPLLGVVQVPEIVTGAAWWSVYQHPLIDEPRHGVVGEVAASAALQQMLEHTGELPEPSKDDIEARLNSTDHGIDAAEHADIIEDALAYIPPMFADVLQREYEQAAAGITQPSARAVRSALKCFTTPRLRDTLLAALLDDPQAGLAFIEKVMRAVPTSWPGMRSQLTATVAVLAHATGQPGLAGVAAQRATEIGPDENFPSLVAKLTDIGQGERMVELVREGAEKTRTILFTE
Sequence
>complement(10561..11133)
CorynebacteriumgenitaliumMLIGYARVSTSKQGQSLDTQRDALIDAGCDPQHIYSDTISGTKWQRPGLDDALAYMRPDDTLVVTRLDRLGRSLADTVNTIADLAERDINVKVLEPALDTSKPTDKVVINVMASLAEWERDLLVQRTREGVAHARAQGRVAGPKPKLSAEQAQIAKELIEGGKSLSAVGRTFNVSRPTIYRALKRIEADA
Sequence
>complement(11150..11776)
CorynebacteriumgenitaliumMSKWSNFVRGEPARQEVLEVALDWIAQRDGVSIDNYMAKHRDDDDCNELQTYFTTVIDWAASVFKMTDSSMRGIAWNKLYEQYGDKGYDATEMTAEARELLSDSQVQSKKGIYEYLLGGKKETRLLSVRVFTEAVKKRVYKRQTDAAEKNGVSNCSYCALGHEGGKAKIWPLKDMDADHVAAWSKGGKTEESNCELLCKSHNRAKGNA
Sequence
>19419..19431
GCGCGAAGCGCAC
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 93160 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 1892
ORF Stop: 1904
Strand: Forward
Protein Sequence: GCGCGAAGCGCAC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: D8M31_09050 (Region 1)
Locus: D8M31_09050ORF Start: 5039
ORF Stop: 5677
Strand: Backward
Protein Sequence: MEITWKDLSFRYTRYAPLILDSVSLTLNTPGIYVVRGPSGSGKSTVLDLLAGLRTPQSGEVVIDGQRADRWSGNKTSHWRAQHVGYAPQAPTLLESLTCQENLALAVNVAGRGLNSQQQVDLLGDVGMADYAGVYPDELSGGQRQRVAIAQALSSQPDVLLMDEPVSALDENNIAVVESLMRNAATSGAIVVYCSHRELFGGAAHTLLEMGR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09050, ABC transporter, phage(gi371496158), PHAGE_Plankt_PaV_LD_NC_016564
Homolog/Ortholog E-Value: 1.36e-26
Locus 3: D8M31_09055 (Region 1)
Locus: D8M31_09055ORF Start: 5833
ORF Stop: 6432
Strand: Forward
Protein Sequence: MEWIRDNDKELVCISENLDLSNWVGRMIANVIAGVAEGELETLTEPVTAGKRAVRKAGRSQGGVAPFGYKSAEREGGGRELVKDPKQQEVLQWIFQQTLFNRPMPHIARDLNNGEVASIRKEFKGKKTQGWHATTNQSILNNKVYLGWTIYQGKPVLDDNGEPVKRCEPSITVEDYNRIQEMWSARTPRTQAPAKISPL
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: D8M31_09055, integrase s-int, phage(gi508179939), PHAGE_Mycoba_HINdeR_NC_021308
Homolog/Ortholog E-Value: 2.00e-37
Locus 4: D8M31_09060 (Region 1)
Locus: D8M31_09060ORF Start: 6526
ORF Stop: 7410
Strand: Backward
Protein Sequence: MLQQVSGELGLYVYMLVDPRNGLPFYVGKGQGLRFSSHGDEAAATSGDAPEENEKLKKIDKIRAAGLEHEIWILRHGMKTKSEYTAVDAAAIDLLHSFPLEVRSEREPVPERFMDQLTNARRESSKGHGIMLLNDLVAEKAAPELTLTEVPMLLITLKGWIDKQECIPGEETRDGYGYKREWLTSSVREQHFEEIGCSVCAWWRIDLARVERNNIEYAVAVHRGVTRAVFKILPGTWEEQGGRRGFQFELVTHGDVKLPDGRDLYDNVVGAHGHRTPEKQRGEMAALRYWPYSS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09060, putative homing nuclease, phage(gi371671534), PHAGE_Pseudo_OBP_NC_016571
Homolog/Ortholog E-Value: 5.60e-12
Locus 5: D8M31_09065 (Region 1)
Locus: D8M31_09065ORF Start: 7504
ORF Stop: 7879
Strand: Forward
Protein Sequence: LFNFGGHNVRVVLDERRAPWFVLKDVCEVLELQAPHMVADRLEEHDRSSTSVIDSLGRSQQVTTVNESGLYDGIFQSRTAGRRPTRASAPAHGRAGSAVPTLGYERAKFRCPTGARSARPPSLG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09065, antirepressor, phage(gi971748197), PHAGE_Paenib_Xenia_NC_028837
Homolog/Ortholog E-Value: 4.07e-21
Locus 6: D8M31_09070 (Region 1)
Locus: D8M31_09070ORF Start: 8539
ORF Stop: 8970
Strand: Backward
Protein Sequence: MSNPFNNGTIVGNAARAPKLFEHANGGATVKLSVYARNTFKNKATGKVESEIVELTGYVQDAKNPGVFGCIGSGDRVAVSYSLKTDVYTDKDGVKHYPLVARIDTVQLIDSKKESAARAARRGGEAANAALAGADADNDEAPF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09070, RecA-like recombination protein, phage(gi100035), PHAGE_Entero_Arya_NC_031048
Homolog/Ortholog E-Value: 9.01e-06
Locus 7: D8M31_09075 (Region 1)
Locus: D8M31_09075ORF Start: 9368
ORF Stop: 10390
Strand: Backward
Protein Sequence: MSTHSHTLASHGEILANLPGILGFYPNNSLILAFFVDDEGVDTVRLGPVARFDLDEAVEKLTESRERFAAWVHHLELDAVIAYMISDDIAQPVFDETATYLTSGAVHLPPLLGVVQVPEIVTGAAWWSVYQHPLIDEPRHGVVGEVAASAALQQMLEHTGELPEPSKDDIEARLNSTDHGIDAAEHADIIEDALAYIPPMFADVLQREYEQAAAGITQPSARAVRSALKCFTTPRLRDTLLAALLDDPQAGLAFIEKVMRAVPTSWPGMRSQLTATVAVLAHATGQPGLAGVAAQRATEIGPDENFPSLVAKLTDIGQGERMVELVREGAEKTRTILFTE
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: D8M31_09075, DUF4192 domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 8: D8M31_09080 (Region 1)
Locus: D8M31_09080ORF Start: 10561
ORF Stop: 11133
Strand: Backward
Protein Sequence: MLIGYARVSTSKQGQSLDTQRDALIDAGCDPQHIYSDTISGTKWQRPGLDDALAYMRPDDTLVVTRLDRLGRSLADTVNTIADLAERDINVKVLEPALDTSKPTDKVVINVMASLAEWERDLLVQRTREGVAHARAQGRVAGPKPKLSAEQAQIAKELIEGGKSLSAVGRTFNVSRPTIYRALKRIEADA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09080, DNA invertase, phage(gi971758535), PHAGE_Escher_pro483_NC_028943
Homolog/Ortholog E-Value: 3.27e-45
Locus 9: D8M31_09085 (Region 1)
Locus: D8M31_09085ORF Start: 11150
ORF Stop: 11776
Strand: Backward
Protein Sequence: MSKWSNFVRGEPARQEVLEVALDWIAQRDGVSIDNYMAKHRDDDDCNELQTYFTTVIDWAASVFKMTDSSMRGIAWNKLYEQYGDKGYDATEMTAEARELLSDSQVQSKKGIYEYLLGGKKETRLLSVRVFTEAVKKRVYKRQTDAAEKNGVSNCSYCALGHEGGKAKIWPLKDMDADHVAAWSKGGKTEESNCELLCKSHNRAKGNA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: D8M31_09085, ssDNA binding protein, phage(gi100044), PHAGE_Propio_BruceLethal_NC_031084
Homolog/Ortholog E-Value: 7.36e-05
Locus 10: attR (Region 1)
Locus: attRORF Start: 19419
ORF Stop: 19431
Strand: Forward
Protein Sequence: GCGCGAAGCGCAC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download