Submission Results
Sequence Name: Not Available
GenBank Accession Number: SIJQ01000001.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: SIJQ01000001.1.PHASTER.zip
gi|00000000|ref|SIJQ01000001.1| Rhizobium leguminosarum strain SM3 chrom_SM3, whole genome shotgun 5052211, gc%: 61.04%
Download summary as .txt file: summary.txt file_download
Total: 4 prophage regions have been identified, of which 0 regions are intact, 4 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 6.7Kb | incomplete | 20 | 8 | 274219-280945 info_outline | PHAGE_Burkho_phi6442_NC_009235(2) | 58.26% | Show info_outline |
| 2 | 7.1Kb | incomplete | 10 | 8 | 492494-499674 info_outline | PHAGE_Entero_phi92_NC_023693(4) | 58.25% | Show info_outline |
| 3 | 11.2Kb | incomplete | 40 | 10 | 3017620-3028918 info_outline | PHAGE_Bacill_Bobb_NC_024792(1) | 61.93% | Show info_outline |
| 4 | 7.1Kb | incomplete | 10 | 8 | 4100121-4107310 info_outline | PHAGE_Bacill_BCD7_NC_019515(3) | 59.17% | Show info_outline |
Region DNA
>1 274219-280945 CTAGCGACCGGCCAGCTTGTATTGGCCGTATCCGACCTTTTCAGCCTCAGCGGCCTTCACCATCACCCGC AGAAGGTATTTGACGTTGGTCTCCTTCATGCCGGCCTCCTTTGCGATTTCGGTCGGCGTGAGCGCGGTCG TGGCGTCGGTGAGGACTTCAATGATCCTGCGCCGCTGCTCAGACCGCTTGACATCATCAGCGTTGCCGAG AACTTCCCAAGTTCCCTTATCGAAACGCAGAGCCTTTTCGATTTCCTCGATGTCACGGCCGCGCCCGTAT AGCTTCGGGCCATCGGCGGTCCGGTTAAGCACCATGATAGTGTCGGCCGCGCCTGTTAGGCCGTTTGTGC CGGAAACCGATTCGAGTGGATCTTCCGCCTCGGCTTTGCGCACGTGATGGACAACGATGACGGCAAGGCG ATGCTCGCCTGCATACTTTTGCAACGGTGAGATCGTGTCATAGTCCGCCGCATACGAATCCTGATTAGAC TTCTTCGGCGGCCGAACCATCGACAGGGTGTCGATTACGATCAGCTTCGGATTGCCCGCGGATTTGCGCC ACGTCTCCAACTCCTCGATCAATCCCGCTCCGATCTTCTTGGATTCGGTCTTGAGCGACAGGCGCGACAT GTTGGGCCGCACGGTGGCCGGCGATAGCACGACCTCCAATCGGTCCTTCAGCCTTCGTCTGTTGTCTTCA AGTGCCAAATATAGAACGTCGCCTTCCTCGCAATCGGCGCCAAGGGTTCGGCCGCCTGTGGCCACCGCGA TGCAAAAGCCAAGCGCCATCCAGCTCTTGCCGAGTTTCGGGCGACCGGCGAGAATAGTTAGGCCTTCCGC GATATATCCTTCCACGACGTAGTCGACCGGAGCGAAGTCCATCCCGAGAAGAGTTTCGGCGTCGATCGCG TCGCCAATTGGCACATTGTCGTTCGCCGGTTCGAGCTTCTTAAAGGGTTGGGTCGGGTCACTGCGTACCG CCAGTTTCGGCAATGGTGCCATTATGCTGCCTCCCGATCTGCAAAATCACGGCCGGCGTCAGCAGGCATC ACCAGGGTCACTTCACGGCCAGCAGCGTGCCACCGTTCGCCGACGGTATTCGCGGCTTGGATGCCTGCGC GGTCGTGATCAGCGAATACGGTCAGGGCCTCAACGTGAGGCAGTGCGGGAAGCCCAGCGACACCGCCAGC GGTCAGGCCGGCCCATACCGGACGGAAGTCGGTGGCAAGGGCGGTTTCAATGCCTTCAGCAATTCCAAGC CCGAATGGGGCCTCCAGCTCATAGAGGCGCACGACTGCGCCCTTGGCGCGGCCGCGCATCTTCTTGTCGA TCTTCCGGCCTTCAGCGTCCAGAAACGTGCGGTGGACGCCACAAGGTTCGCCAGTCATCGCGTCGGTCAT CAGAGCGACCATGGAACGGCAAGTCGGGCGGAAGGCAAGCGCATCGCCATCATAGGACAGGCCACGCGAT TCGAGGTAGACCTCGGCAAGGGTTCCTTTCAGCGGCACTGTCGTTTCCCAGATGCGACGAGCGTCATTGA TACGACGCCGCACGTCGAACAGTTCAGAGAGGTCAGGAAGGGCAGCGACATGCACGATCGGGCGAGCGTC GGTATATCCTAGCTTGGCCTTCACATGATCGCGGCAATCTCGGAAATCGTCCTCGGCAAAGCTGTTCGTT GTGAATGTCCCGTCGGCATTGAAGGTGACGGAAAGAGAGCGGTCGTGTTTTGAATGGCCGGGGCCGGGGC ATAGAACACGGTTGCCGCTGACGTTGCCGCCGAGAAGGATGGCGGCTTGTTTAATGTCGATCTGCATCGG CGGTCATTGCCTCGTGTTGGTCAGTTGCGAGTTGGGTGATTTTTGCGGCCAGGCTGCTGGCAAAGGTAGC TACCCGCCGATGTCCGGACTGCGGTGCGAAAGTCAGCAGCCGGCCGTCGCGCATTCGAAGCAACCGCAAT CCGTAGAGGCGGCATTCATCCGTGAGCGCGAGGTCGAACACGGCGATGGCTCTATGACCACCACTCGGCT CATCGATCGGTCTGAATTCAAGGATTTCCATGTCTCTCCTTCACGCGCACAACGGCGCGCCCGCCAGCGT GCCCGGCAGGTGGTTAAGTCTGTGATTGGATGTGCCTTTGCAGCCGCTATTCAGGTGTCGAAGGTTCGAT ACCGTGGCGACCAACCAAGCCAAATATTTCTAGACAAATTCGTTTTAAGTGGTTGATGTCGGCAAGCGTT CTAGACGGAAGCGAGTTTCAGAAGACCTTGAAAACACCCATTTCATCGCGGATTGAAAATCCGCGTGTCA CTGGTTCGATTCCGGTCCTGGGCACCACTGCCATCCACGATGTTTTCATTTCATTTTTGTATCCGCATCA TCGATGCGTGCGGGCATCCGATCGAAAGAACCTGCAGAATTTCGCAAGTATCGCCACTGGCAATATTATT GTTGCGAAATAATTCGCTTTCAGCTATATTTACCCATGAAAAAGATCGCCTACAGCAAGGCCGCCACGAA GGCACTCCGCAAAATGCAGCCGAAGCGCGCCGCGGCGATCGTCGCCAGGGTCGAAGCCTTCGCCAACGGT GAGTCAGTCGACCTCAAGAAGCTGCAAGGCAGCGAATTTTTTCGAATTCGTGTCGGGCAGGACCGTGTCA TCATCGACGATCAGACCATGCAGGTCCTCGTCATCAAGGCCGGCCCACGTGGCGACATCTATAACGAATA GGGAACCACCATGGGTGAAATCCAGAAACTGACCATCGACGGCAAGGGGTACGTGCTGCTTTCCGAAGAC GACTATCAGGACCTTGTCGACATCAGCGAGGCGCGTGCCGCAAAGGCGCGTATCGGCGCTGGCGAAGAGA CCTGGCCTGAAGACGTCGTCAAGGCGCTGATTGCCGGCGAAGATCCTGTCCGGGTGTTCCGTAAGCATCG CGGTATGAGCATCAAGGAGCTGGCTGAAAAGTCCGGGCTCTCCCAGCCCTATCTTTCGGAAATCGAGACC GGAAAGAAGGAGGGCTCCCTGGACGCACTTAGGTCGATCGCCAGCGCGCTGGACGTCGATCTTGACGATG TGGCTTGATGCATACGCATTCCCAAGGCGGCCACGTTGTGATCGAGCTTGCTACTTTTCGGACCGTATCC CTTTGTCCCCTTCTTAGGGAGGCTCCGTCGTCCAAATATGATGCCGCGCGCCCGATATGCGGGGGCCTGA AGGCGGCCAACAAACTCCTGTGTTCAGAAGTTAGTGTCGCCCTTTCGATGTCTTCGCCAGCATCTCGCTC AGTGTAGCCGCCGAGAGCATGGATTCGGCCAAAAGCTTCTTGAGCTTCTGGTTCTCTTCCTCCAGTGCTC TCAACCTTTTGGCATGGAGACCGGCATTTCCGACCTGCAAGGATTGCCACCGATAGAAGGTCGGCTCGCT GATACCGTGCTTGTGGCAAACATCTGCCACCGTCACTCCGGCTTGGTGTTCTTTCAGAATACCGGTAATC TGGTCGTCGTCGAATTTTCTCTTGCCCATCACCGCCTCAGTCCTCGCGAAATGCTCTGTTGAAACTGTCG AGGAGTGGTCTGACGGCATAGAGCGCCACGCTGCTTTGGCCCGTTTCGATCAGTGTCTGTGTGGGCATGC CGGCGACCAATTCGACATCGCTCATTTTCGCCAACCGCTCGTCCGTTACGCGGATCGTCGCAGCAAAGTA GGGCTGGCCGCTCTGCGGATCGGTGAGACGGTCCGCTGATACATACTCCACTCGACCTTTCAGGAGTGGA ACGCGCCGCTGATTATATGGAAGGAGGTGGACCTGTGCCTCGAGCCCGGCACGGACGAGATGAATGTCTT CCGGTCTGACGTGGGCAGACACGACAAGGCGATCGGTGCGTGGCAGAAGATCGACGAGCGGTTCACCCGC GCCGATCACCCCACCTGATGTGTGGACGCGCAGGTTCATGATTGTTCCATCCTCGGGAGCACGGATGTCG GTCCTTGAGAGTTGGTCGTCGATCGCCCGCAAGCGCTCGCGCAGTTGCATGATCCGGCTCTCCGTATCGC GCATGCCTTGGGCGACTTCGCTCAACCGGTCGCTCTCGAGCTTTGCGAGATCGGCCTGTGAGCCGCTGAT CACCTGGTAGGCGCGAGAGATCTGTGCCTCGACTTGACCCTGCTGGCCATCAAGGTCTGCTTTTTCCCGC TGGAGGTTGAGAAGTCTGCTCCTTCTTTCCAGTCCTTTGGCGCTGAGGATCGTAACCTGATCCAGTTCCT GGCTCGAGATTGTGGCTCTGTCGGCCAGTGCTGCCTTCTGCGCGCCAAGCCCGACGATTTCCTGCCGCAC CTGCGCGATTTTTTCATTGGCGATCTGAATTTCCGCCTGCATGACGCGGCGACGGGCCTCGAAGATTTTC TGCTGCCCGATCAGAATCGCGCTGACCGAAGGATATCTGTCCATTGCTGCCCTGAGATCATCAGGATAGG CGACACGGTCGCCGCCCGTCTGCTCCGCAAGCAGGCGGGCACGGCTTCCTTCGGCGTCCCAAAGTTGCCC TTGAATGCTGTCTCTCTCCGAGCGGGACTTCGTATCGTCGAGCTCTATCACGATTTGCCCGCCCATGACC GCATCGCCGTTTTTGACCAGTATCCGTCGGACAATTCCGCCTTCCAGATGCTGAATGGTCTTGCGGCTGG ACTCCGGTTCGATCACGCCCGATGCGATCGCAGCGCTTTTCAGCGGCGCCAGGACTGACCAGATTCCCAA TCCGACGATGAAAACCAGGATCAACAGGTTCCCCGTCCAGACAGCGCCTCTGAGCCCCGGCATGGGCGAG GGGGGCGCGGGTCCGCGCTGTTTCGACTCGATCACCGGCAAATAGGCCGTCTGTTGCTTGGCTGTCGCTG TCGATCGTTGAGCCAACCGCCGACCCGTCCCCGACGAATCTGGAAATGACGAATTTGGAAATCTCGCCGG CGTTGCGTCCAGTTGAACAAGGGCCATGGCAGCGTTTCTCCCTACGTTCCTGTTCGCGACGGTGGTTGAA GATAAGTTTCATAAATCCGCTCGCTGTCGCCGACAGCAGCCACAGTCCCGTTACGCATGATGGCAATCTT GTTGGTGACTGGCAGGATTCCCATCCTGTGAGTTATGATAACGACGGTCATCCCCCTGGATTTCATGCGC TCGATTGCCGTGAACAGCATCCGTTCGCCGTCATAATCCAGGCTCGAATTCGGATCGTCGAGAACAATCA GGGACGGATTTCCATAGGCCGCCCGTGCCAATCCAAGCTGTTGGCGCTGAGCTCGAAGGAGCAGGTTTCC ACCTTCACCGATATCGGTCTCGTAGCCCTGCGGCAGCCGCATGATCGCTTCGTGCAACCCAACCAGCTTC GCGGCGTCGATGGCTTTGCCGGGATCTCCTCCGTCCAGCCGGCCGATCACATCCTTGATCGCTCCTCCGA AAAGTTCGATGTCCTGCGGCAGATATCCGACGTGGCAGGTCCCCCCGCAAAGGCGCAGAGCCGAAATATC GACCCCACCGAGAAGAGCATATCCGCTCGTAGCTGGCACAACGCCTGCTATGATGCGACCAAGTGTCGAT TTTCCCGATCCCGACGGACCGATGAGCGCTATGCAATCGCCGGGCGCGAGGCGCAATGTGATATCCGTCA ATATTGGCCGGTCGGCGAATGGCTTGAAATAGCTGACGTTATCGAGAACGAGTCCATTGGGTTCCGGTCG CGGCACCATTCGGGCATCGTGTTCAGATGCAACTGATATCAGCATTCTGTTCAGGCGATTGAAGGCATTG CGCGCAAACGTAAGGGAGCGCCATGCACCTATTGCGCCCTCGATTGGTGCGAGCCCGCGCCCGAGCAGCA GGCTCGCAACGAAGATGATCCCGGGACTGCCGTTGTTCGCGAGCACTAGCCATGTCGCCGATCCCATCAT CAGGATCTGCGCGAGTGTGCGGATCGATTTGGAGAAACCAAGAATGATCTCCGTCCGATGCATCGCGATG TCCTGCGCCCTTCTTGCCATTTCTGCATCGCGATAGACGATCAGCGCGGCGCCATCCTGCATGCCCATTG CCCTGATTACCTCGATGTTTTTGAGGGCGGTCGCAAATCGCAGATAGCTCCTCGAAAGGGCAAGATTGGC GTGGGCAAGCGGCTCTCGCGTCGCCAGTTCCGTCATGAATGCAAACAGCAGCAGTGCAACTGCGCTCAGA AGACCGATGGTCCCAAGCAGCGGATGAACAAGAAAGAGCAGGAGCAGGAATAGCGGCGCCCAGGGAACGT CAAAAAAAAGCGAGCTAGCCGGTGAATCGAGGAACTGGCGCAATGCGGCCAGGTCCCTGTAGCATTCCGC GGCGGCTCCCGTATCGGCACGAGCGGCATATTCGAACGATGCGGTCAGCACCATGGGCCGCAGCCTGTGA TCCAGCCAACTGCCGATGCGCGAAAGAGCTGCCCTGCGCACGATATCCAGCGTGGACCCGACCACCACGG CGATGGCGATGATCATCGTCAGCATCAGGAGCGTGTCAGCGCTTCTACTCGACAGGACCCTGTCATAGAT CTGCAGGAGATAGATGGAAGGCGCCAGAAGAAAGAGATTGTAGCCGCAGCTGTAGAGGAAGACCAACCCG AAGGCTCCGGCACAAGCCCGGAGCGCAACAACAAGCTGTGTCTGCGGGCGCGGTGGCTTTATGGAAATCG TTGTCAT
Region Details
| Region | 1 |
| Region Length | 6.7Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | transposase |
| Region Position | 274219-280945 |
| # tRNA | 0 |
| # Total Proteins | 8 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 87.5% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Burkho_phi6442_NC_009235(2) PHAGE_Burkho_phiE125_NC_003309(2) PHAGE_Burkho_phi1026b_NC_005284(2) PHAGE_Escher_PA2_NC_028449(1) PHAGE_Paenib_Vegas_NC_028767(1) PHAGE_Bacill_BCJA1c_NC_006557(1) PHAGE_Shigel_Ss_VASD_NC_028685(1) PHAGE_Escher_TL_2011c_NC_019442(1) PHAGE_Entero_VT2phi_272_NC_028656(1) PHAGE_Plankt_PaV_LD_NC_016564(1) PHAGE_Thermo_THSA_485A_NC_018264(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Entero_EFC_1_NC_025453(1) PHAGE_Mycoba_vB_MapS_FF47_NC_021063(1) PHAGE_Mycoba_Muddy_NC_022054(1) PHAGE_Escher_P13374_NC_018846(1) PHAGE_Clostr_PhiS63_NC_017978(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 25% |
| GC % | 58.26% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 492494-499674 ATGTCGGTCGCGCGCACCCATTTTCCTGCCTATAGTCGCGCGAGAATGGAATCGCCGGTTCATCCGGCGG TTTCGAGGGATGCAGGATCGGCGGAGGCGGCCATCGCGAGCGAAGCGGATATCAGGAGCGGCCTGACGGA AAATCTGGCAAGGCTCTGGCGTTATGGTCTCGTTCTCTCGCATCAGCGCGATGTCGCCGACGACCTGGTC CAGGCGACCTGCCTTCGCGCGCTGGAGCGCGCCGATCAGTTCATCCCCGGCACCCGGCTCGACCGCTGGC TGTTTTCGATCCTGCATTCGATCTGGCTGAACGAGATCCGCTCCCGCCGGGTGCGCCAGGGCCAGGGTTT CGTCGATGCCGGGGAGACGCTGACCTTCGATGGCGCGCACGACACCGAAACCCATGTGATGGCGGGTCAG GTGCTGAAACAGGTGAACGCGCTGCCCGAGGCGCAGAGGACGGTGGTTTTTCTCGCCTATGTGGAAGGAC TTTCCTATCGCGAGGTTGCAGGCATATTGGATATCCCGATCGGAACCGTGATGAGCCGGCTGGCGGCTGC CCGCGCCAAACTTTCCGACGCCGGACCGGAAGGGGGACGGCAATGACGACGAAACACACCATTCCCTCCG ACGAGGACCTGACCGCCTTCATCGACGGCGAGCTGACGGCTGAAGAGGCCGCGCGCATTGAAGCCATCGT GAACGAAGACGAGGGCGCCGCCGAGCGGCTGGAATTCCTGGCGCGCGCCAGCCTGCCCTTCAAGCAAGCC TTCGCCCCGCTGCTCGCCGAAGCCCCGCGCGCGAAGCTGGAGACGATGCTTGCCGCCATCCCGCCCCAGC AGAGCGCAAAATCCGGCCTCACACCCGCATTCGCCACTCGTCGCCGCTTCCTCGGCGCGCTCGCCGCCTC GCTGGTCGCCGGCATCGCCATCGACCGCGCCGTCATCGGCATCGGAGCACGCTTTTCGGCAAAGGACGAA AACAGCGAATGGCGCGCCGTGGTCGCCGATTATATCTCGCTCTATACCCGGGAAAGTCTGGCCGGCCCCG TCCCCAGCACGGAGGACCAGGCCGCCCAGCTCGCCGGTCTTGACGAGAAGCTCGGCCTGTCACTCTCCCC CGAAGCCGTCTCGCTCCCGGGGGTCGATTTCAAACGCGCCCTGCTGCTGCAATATGATGGTAAGGCGCTC GCCCAGATCGCCTATCTCGACCCCGAGACCGGGCCGATGGCGCTGTGCATCGTCAAGTCTGACAAGGGGC CGAAGGCACCGGACCTCGAAAGCCGCAAGGGTATGAACGTCGTCTACTGGTCAAATGCGACGCACGCCTT CATGCTGATCGGCCGCATTCCGGTCGACCGCATGAAGGAGTTGGGAGAGGACGTCAGCAAGAGGCTTTCA GCCTGACCTCTAAAGCGCGTCGCAAGCTTTCAGGCTCGCTCTTCGCGCTTTAGCTCTTTGTTTTACGCAT GCCGCTATCGCAACACCGCTGCACACTTTTGCGCGGCATGCTTTTGTTCCGCCGGATCACAACTATTTAA TCCAACAAGCCACGCAAATATTGGCCATAATCCCCGTTGCCCGCTTTGGCGGCAATCTGGGCGAAGTGCT CCTTCGTGATAAAACCTTTCGCGAGTGCAATTTCCTCCGGGCAAGCGATTTTGAAGCCCTGGCGTTTTTC AAGCGTGCGGACGAACCCGCCGGCCTCCAGCAGACTTTCGGGTGTGCCGGTATCAAGCCAGGCATATCCG CGGCCCATCATCGAGACACGCAGCTTCCCCCGCTCCAGATATGTCTTGTTGACATCGGTGATCTCGTATT CGCCGCGCGCCGATGGCTTTAGATTGGCTGCGATATCAACGACATCAGCATCGTAAAAATAAAGGCCGGT GACAGCCCAGTGCGATTTGGGCTTTGCCGGCTTTTCTTCGATTGAGATTGCAGTCATATCGCCGCCGAAT TCGACGACGCCGTAACGTTCGGGATCGTGCACGTGATAGGCGAATATCGTCGCTCCATCGCCTTTCGATA CACCCTCTTCAAGCAGTTCTGGAAGGCCGTGGCCGAAGTAGATATTGTCTCCGAGGATCAGACAGGATGG TCCGCCCGCCACGAAGTCCGCTCCGATAATGTAGGCTTGGGCCAGCCCATCGGGACTTGGCTGGACAGCA TAGCTCAGAGACATGCCCCATTCACTGCCGTCACCCAGCAATCGCTGAAAAAGCGGCATGTCGTGCGGCG TGGAGATGATCAAAACTTCCCGTATGCCAGCCAGCATCAAGGTCGTCAGCGGGTAGTAGATCATCGGCTT ATCATAGATCGGAAGCAGCTGCTTCGAGACCGCATGAGTCATCGGGTGCAGGCGACTGCCGCTCCCGCCC GCAAGCACAATACCTTTCATACGGCCTCCTTCGGCTCTTCCAAGAGCTTTGTCACAGCAGCGCGCACTGA TATCCGCCACTCCGGCATGCTCACGCTATAAAGGCTCTTCAGCTTATCGCAACACAGTCTGGAATTGGCT GGCCGTTTCGCTGCTGTGGGATAGTCAGCGGTCGCAATGTCCTTGACGGTGACGCGCCTGCCGGTCTTTT CCTGATGAATTGACAATATATATCGTGCAAACCCAGCCCAGCTGGTTTCGCCGCTGCCGGCCAAGTGAAA AACGCCCCGCAAGTCCGGGCTGGAATCGTTTGATAGCCTGCCTGCTATTTTGACGATAGCCCCGGCGATG TCGCCGGCGGAGGTCGGGCAACCCAGTTGATCGCCCACAACGCTCAACTCTTCCCGCGTCTCCGCAAGCC TGAGCATGGTTTTCACGAAGTTGTGGCCAAACGTCGAGTAGACCCAGGCCGTCCGCAGGATGACATGGTT TTCATTCGCTGCGGCGACCGCATATTCTCCCTCGAGCTTCGATCTGCCATAGACGGATACCGGTCCGACC GGGTCGCTCTCGACATAGCATTCGGGCTTGTCTCCATCGAAAACATAATCAGTCGAAAGATGGATGACGG GAAGGGATAGCTCGGCCGTTGCTGCGGCGATGGCTTTTGCGCCGTCTCGATTGATGGCGAAAGCTGCCGC CTCGTCGCTTTCGGCTTTGTCAACGGCCGTGTAGGCGGCGGAAGAGACGACGACCTCGGGCTTAATTTTC GCAATGATTTCACTCACCATCGAAGGCTCAAGCAAATCCAGCTCGGGCCTGCCGATGGCGATGATCTCGA TACCTGGCATGTTCAGCGCCTGCAGCGCAGACGTGACCTGGCCGCTCTTGCCTGTTACCGCGATGCGCAT CTCAGACCTTTTTCAACACGCCAAGCCGTTCACCGGAATACACACGCTCACGCAGCGGCTGCCACCACCA AGCGTTTTCCAGATACCACTCAACGGTCTTGCGAATACCGCTGTCGAAATTCTCCTGTGCTCTCCAGCCG AGTTCGGTCTCGAGCTTGGTGGCATCGATAGCATAGCGAGCATCGTGGCCCGGCCGATCGGCAACATAGC TTATAAGATCGCTATGCGGAGCGGTGCCAGGCCGGACTTCATCCATGATCGCGCACACGCGCTCGACAAC CTCGATGTTTCGCCGCTCGTTGCGCCCGCCGACATTGTATTTTTCGCCCGGACGACCGCGCTGCACGATG AGCCAGAGCGCTCGTGCATGGTCATCGACATAGAGCCAATCGCGGATGTTTGCGCCGCTTCCATAGACGG GCAATGGCTTCCGTTCCAGCGCATTCAATATGATGAGAGGAATGAGCTTTTCCGGGAAATGAAAAGGACC GTAATTATTCGAACAGTTGGAAATGATCACCGGCAGGCCGTAAGTCCTTTCCCACGCCGTCGCGAGATGA TCGCTCGCTGCCTTGGATGCGGAGTAGGGAGAGGACGGATCGTAAGCTGTGGTCTCGGCAAAGAACCCGT CTTCACCGAGGGAACCATAGACTTCGTCGGTGGAGACGTGCAGCATCTTGAACGCTGCCTTTGCATGCGG GGGAAGGCGCTCCCAATATTGCCGCGCGGCCTCCAGGACGCTGAAGGTGCCGTTTACATTCGTTTCAATA AAATCCGCCGCTCCGGTGATCGACCGGTCGACGTGGCTTTCCGCCGCCAGATGCATGACATAATCGGGGC GAAATTCCTCGAAGGCATTGCAGACAGCGCTTCTGTCGCAAATGTCAGCTTTGAGAAACCTGTAGTTGGG AGCATTCTCGATTGTCTTCAGCGAGGCGAGATTGCCGGCATAGGTCAGCTTGTCGATATTGAGCACTTCG GCGCCGATGTCGCTGACGAGATAGCGCACCAATGCCGAACCGATGAAGCCCGCGCCACCCGTTACAAGAA CACGCATGAGGCCCTCCGTTTCACGAAAATTGAAAATATGTGGGGAGTTCCGAAAGCAGCGGCTGCTTGT TGTCCTTATCAGAAAGAACGTAGCCATCCATCTGCGGCCACTCGATCCCGATTTCGGCGTCGTTCCACCG CACGCCACAGTCATGCTCCGCGCTGTAGAGAGCTGTGACCTTGTAGCTTATGATCGTATCAGGCTCCAAA GTTACGAACCCATGCGCAAATCCGGCCGGCACCCAAAGTTGCGAGCCGTTCTCAGGGGACAGTTCTGCTG AGACCCACTTCCCGTATGTCGGAGAGCCATGTCTGATATCGACCGCCACATCCAGGAGCGCGCCGCGCAG GCAGCGTACAAGTTTGCCTTGTGCGAATGGAGGCAATTGGAAATGGAGTCCCCGGACGGTCCCCGGTTGC GCTGAAAGGGATTCATTATCCTGCACGAAAGAAACGTCGGCCACGTTCGTGCGGAACCAGAAATCTTTGA AGACTTCGCTGAAGTAGCCCCTCGAGTCACCGAATCTGGCAGGTGTGACCTTCTTGACGTCGCCGATCTC CAGTTGTTCCACTTTCAACGCATACATCCTTGCAAGAGGCTCGGTCGCCGGATTGTGACAGCGGTTGAGG TATGCAATATAGCCAATTGTCCTGCTGAGCACATACGTTGGCGAGCGTGAGACGGCAACTGGGGTGCGGC GTGAGATGATATTCGTTCACGTCGTCGAGTCCGTCCTGGCGCTGGCGGTGGTTGAGGGGACGATTCGTGC TTATGTCGCAATCGGCACGGAAGGCGTAGAGGATTTGCTTCAGTCGCGGTGGAAGTAAAGATATCACGAC GCGAAATCGGCATATGCTCGCGCAATACCATCGCCAAGTGATGTGGTCGCCTTCCATCCAAGTGCCGACA AACGGTCAACGCTCATCAGTTTGCGCGGCGTTCCGTCCGGCTTCGTCTGGTCGTAAACAATCTCGCCCGT GAAGCCGACAACCCTCATGATGGTTTCGGCAAGTTCGCGGATGGTAATGTCTTCGCCCGTCCCAATGTTG ATGAGCCCCTCGCTGACCTCCTTTTCCATCAAAAAAACGCAGGCGTCAGCCATGTCGTCGACATACAGGA ACTCACGCATTGGCCGACCGGATCCCCAGACGACCAACTGCCGGTCACCGCGAATTTTGGCCTCATGGAC CTTTCTGATCAAGGCCGGCATCACATGGCTACTGTCCAAATCATAATTGTCATTCGGCCCGTACAGATTA GTCGGCATCCCCGAGACATAGCGGGTTCCATATTGCCGATTGTAGCTCTCGCACAGCTTGACGCCCGCTA TCTTGGCGATCGCATAGGGCTCGTTCGTCTGCTCCAGGGGGCCAGTCAGCAAATACTCCTCGCGAATGGG CTGAGGGCAGTCGCGTGGGTAGATGCAACTCGAGCCAAGAAAAAGCATGCGTTCCACACCAGCCTGCCAG GCGGCATGAACAACATTCGTCTCGATCATCAGATTCTGGTAGAGGAACTCAGCACGATAAACGTTATTTG CATGGATGCCGCCAACCCTTGCCGCGGCCATGAAGATGTAGTCCGGCCGCTCCGTCTTCATGAATTCGGT AACGGCCGCCTGATTGACGAGATCCAGCTCGGCGTGGCTTCTGGTAACGATGTTCGTGTAGCCGCCAGCC TTCAGCCTCCGGACAATGGCCGACCCCACCATGCCTCGATGGCCTGCAACATAGATCTTCACGTCTCTGT TCATCGGATCACTCGTGATAGTCGTATGCGGAGAAGCCGTGGCGTTTCACGAGTTCGTCCCGCTCGGCGG ACTTAAGATCCTCGCGCATCATTTCCTCAACAAGCTGCTTAAACGTTATCCTTGGTTCCCAACCGAGCTT TTCCTTCGCCTTCGACGGATCGCCCAGCAGGGTCTCGACCTCTGTGGGACGGAAGTATCGGGGGTCGACC GCGACGATGCAGCGGCCGTTCTCGTCGTAGCCTTTTTCCTCGGCGCCTGATCCTTTCCATGAGATTGGAA GCCCAATCTCATGGGCCGCGGCGTCGACGAATTCGCGGACGCTGTACTGCACGCCAGTGGCGATGACGAA ATCCTCCGGCTCGTCCTGCTGCAGCATCAGCCATTGCATCTCGACATAGTCTTTGGCATGCCCCCAGTCA CGCTTTGCGTCCAGGTTGCCGAGATAGAGGCAATCCTGAAGGCCAAGCTTGATGCGCGCCAGTGCACGGG TGATCTTGCGCGTCACAAAGGTCTCGCCCCGCACGGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAGGC ATAAATGCCATAGGCTTCCCGATAGTTAACCGTGATCCAGTAGGCGTAGAGTTTGGCGACAGCGTAAGGC GAGCGCGGATAGAAAGGGGTCGTTTCGCGTTGCGGGATTTCCTGCACCAGGCCGTAGAGTTCGGAGGTGG ACGCCTGGTAGAAACGCGTCTTCTTCTCAAGGCCGAGAATGCGGATCGCCTCGAGGATGCGCAGCGCACC GAGCGCGTCGGAATTGGCCGTATATTCCGGCTCTTCGAATGAGACGGCGACATGCGACTGTGCCGCGAGG TTATAGATCTCGTCGGGCTGGACCTGCTGGACGATGCGAACGAGGCTCGATGAATCCGTCATGTCCCCGT AGTGCAGCACAAGCCTGCGGTTGGTGTCGTGTGGATCCTGGTAGAGGTGGTCGATGCGGTCGGTATTGAA GAGGGACGTGCGGCGCTTGATGCCGTGTACCTCATATCCCTTCTCGATGAGAAGCTCTGCAAGATAGGAG CCGTCCTGGCCCGTGATGCCTGTGATGAGGGCTCTTTTCAT
Region Details
| Region | 2 |
| Region Length | 7.1Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 492494-499674 |
| # tRNA | 0 |
| # Total Proteins | 8 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 87.5% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 3 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_phi92_NC_023693(4) PHAGE_Sphing_PAU_NC_019521(4) PHAGE_Escher_phAPEC8_NC_020079(4) PHAGE_Synech_ACG_2014f_NC_026927(3) PHAGE_Synech_S_CAM7_NC_031927(2) PHAGE_Synech_S_SKS1_NC_020851(2) PHAGE_Sinorh_phiM9_NC_028676(1) PHAGE_Bacill_SP_15_NC_031245(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Synech_S_SM2_NC_015279(1) PHAGE_Rhizob_vB_RleM_P10VF_NC_025429(1) PHAGE_Prochl_P_SSM2_NC_006883(1) |
| First Most Common Phage # | 4 |
| First Most Common Phage % | 50% |
| GC % | 58.25% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>3 3017620-3028918 ATGAGCAATGGACCCTTGACTGACGCACAGCTCGCCGAACTCCAGGCACTGGAGAAGCTTTCCGACGAGG ATATTGACACCGGCGACATTCCTGAGATCACCGACGAACAATGGCGCCTTGCCCGCAAGGGCAATTTGTA CCGGCCGCTGAAGCAATCGGTGACCATCCGCGTAGACGCCGATATCCTAGACTGGTTCAAGAGCCATGCG GGCGGTCGCGGCTACCAGACGGATATCAATGCCGCGCTGCGCACCCACATCGCCAGGCATCAAAAAGGGA GCGGCTGACCGCTTCTCTTTCGCTTATTCCATCGGCACCGCCACGAACCGCAGATCGCCATTCGCCGATG CGATCATCAGCTGGGCGTTGCGGCGGCCTTCCTGTTTCAGCGCCTGCACCTTGGCGGCGACCGCATCCGG CGACTTCATGAACTCCTGCGCCACCTCGACAATCACGTCGCCGGGCTTCAGCCCCTTTTCGGCGGAAGCG GAGCCGGGCGTCACTTCCGTCACGACGACGCCATCGACGCTCTCGGCGATGCCGAAGGCCTTGCGGGTCT CGGCGCTCAACAGCGACAGCGACAGTCCGAGCACGTTCTTCGGCGTGGCCGCATCGGGCGACACCTGGCC CTTATGCTGGTCGGGTGTATCAGGTGCGGGCTTGGCCTGATCGCCGGTGTCAGGCTGGTCCATGTCATTA TTCTCGCCGGGATCCGGAGTGATCACACCGTCGTCCTGCGAGCCATCGGGCGCTGAATCGCCGGATGCAG CCGCCTGATCGCTGTCCTCTAGCCGGCCGAGCTTCACCTTGACGGTCTGCTCCTTGCCGTCGCGCAGCAC CACGACGTCGACTTCCTTGCCGACCGTGCTTTCCGCTACGACGCGCGGCAGGTCGCGCATTTCGCTGACG GTCTTGCCGTCGAATTTCAGAATGACGTCGCCCGCCTTGATCGAGCCGTCGTCGACGGGGCCGCCCTTGA TGACGCCGGCAACCAACGCGCCCTTTGCAGTGTCGAGCCCGAGGCTGTCGGCGATATCGTCGGTCACCGG CTGGATGCGCACGCCGAGCCAGCCGCGCCGCGTCTCGCCATATTCGCGCAGCTGATCAACGACGCCGGAA GCAAGCTCCGACGGCACCGAGAAGCCGATACCGATCGAGCCGCCGCTCGGCGAAATGATCGCCGTGTTGA TGCCGATCACTTCACCCTTCATGTTGAAGAGCGGGCCGCCAGAATTGCCCTTGTTGATCGCTGCATCCGT CTGGATGAAGTTGTCGTAGGGACCGGCATTGATGTTGCGGCCACGCCCGGAAATGATGCCCACCGTCACC GAACCGCCGAAGCCGAACGGATTGCCGATCGCCATCACCCAATCGCCGATGCGCATCGTGCTGGAATCGC CGAATTTCACGGATTTCAGCGGCGTCTTTGGCTCGACCTTCAGCACCGAAAGATCGGTCTTCGTATCGGT GCCGATCAGCTTCGCCTTGAGCTTCGAACCATTGGCGAAATTGATCTCGATATCGTCGGCGCCCTCGATC ACGTGGTTGTTGGTGACGATATAACCGGCCGGATCGATGACGAAACCGGAGCCAAGCGAGCTGACATTGT GATTGCCGCCCTTGTTGCCCTGCTGCTTGTTGAAGAAGTCGTTGAAGAATTCCTGGAAAGGCGAGCCGTC GGGCGCGCGGGGCGCCGGGCCTGCGCCCTCGTCATCCTTCACTTTCTGCGAGGTCGAGATGTTGACCACG GCGTCGAGCAGCCCCTCGGCGAGATCGGCGACGGAAGCCGGGCCGGTGTTGGGCACGGCGGCCTGGATCG GAGCGGTCTGCTGTGGTGCGGCGGGTGCGGGAGGAGTAGGAGCGGGTGCCGTAACCCCGGGTGCGGTCGT CTCAGGCGCGGTTTGCGCATAGGCAATCCCGCTCACGCCGGCTTGCGCCAGGATTGCGGCGCTGGCCATA AGCGCGAGCGTTCGTCTGATGGGCGAGCGAATCGTGGGGGCCATCAAGCTTCCTCATAAGGGGTGCATGC GCACATTGAGCATCAGCATAAGGCGGAATGATGGAGGGTGAAATCACCTTTTCGCGAAATCCCCGTGCAA TGTGACGTGCCCTCGCAAAAGCCGGATCGTCACAATCATTCCACGAAAAAAGGGCCGGCGCTCGGGCCGG CCCTTCCAGAATTATCGGGCTCGTTTCTCCTGCCGTCAGTTCGCCGGCTGGGCGGGTGCCGCCGGAGCAG CTGCGCCGGGAACTCCCGGAACTGGCGCGGCCGGATTTGTCGGCTGCAGGGTGCCGGCGGCATTGTCGAA ATAGCGGAAGAATTCCGAATTCGGCGACAGCACCAGCGTCGTGTCCTGCGACGAGAGAGCGGAGGAATAG GCCGCCATCGAGCGATAGAACTCGAAGAAGGCTGGATCCTTGCTGAAGACTTCGGCGAAGACGCGGTTGC GTTCCGCGTCGCCCTGGCCTCGAAGGATTTCCGCATCGCGCTGGGCGCCTGCGGTGAACTCGACGACCTG ACGGTCGGCGATGGCTCGGCGCCGCTGGCCTTCCTCATTGCCCTCGGCACGGATACGCTCGGCCTCGGCG AGGCGTTCCGACCGCATGGCATTATAGGTGTTGGGCGCAACCTCCGGCGAAAGGTCGGTGCGCCGGATGC GAACGTCGTCTATATGCAGGCCGAGATTTTCGGCATCCGTGCGCAGGTCGTCGCGAATCTCCAGCATCAT CGCGACACGCTCTTCCGAGAGCGCGGCATTGTAGTCACGCAGACCGTAGACGCGGCGAAGCGATGAATCG AGCTGGGCTCTCAACCGCGCTTCCGCGGCTTCGCGATCGCCCGATACCGTTTCGCGGAAGCGGCGAACAT CCGCGATGTTATAGATCACGAAGGCATCGACGTCGAAGGTCTGGCCATCCTGAACCTGAACGCGAATATT GTCGAGATCGAGCCTCAGCGCCTGCTTTTCGACCAGCTGAACGCGGTCGGCATCCATAAAGCCGAAAGGC AGCTTGAAATAAATGCCAGGCTCGGTCTTGACCGACTGGATCTGGCCGAAACGGACGACGATGGCCTGCT CGCGTGCATTCACCACGAAGATGGACGAATAAAGCCCGACCAGCACGATGGCGAGGATGATGAAAATAAT GGGAAGTCTGTTCGATGTCATGACTCAACCTCCCTGCTGTGCCGGCTTGCCAAGCTCATTGAGCGGCAGA TAGGGCAGGACGCCCTGCTTCTCGTCAATGATGACCTTCCGGGAATTCTTCAGCACCTGCTCCATCGTTT CGAGATACAACCGCTTGCGGGTCACGTCGGGCGCCTTGGAATATTCGTCGTTGATCGCCGTGAATCGCTG CGCTTCACCTTCTGCCTCCTTCACGACACGGTCCTTGTAGGCGGCTGCATCTTCACGGATTCTGGCCGCA TCGCCTCGCGCCTGGCCGAGCTTCTGGTTCGTGTAGCGATTGGCCTCTTCGATCGTGCTGTCACGGTCAC GGCCGGCACGCTGCACTTCTTCGAAAGCATCGGCGACTTCCCGCGGCGGCGCCACGTTCTGGATCGTCAC GCCGGTCACGGTCACGCCCGCGCCATAGCGGTTCATCGTGTCCTGCAGGATATTGAGCACATCAACTTCG ATCGGCTGACGATTGCTGCGGAAGGCGTCCTGCGCCGGACGCCGGCCGACGATTTCACGCATGGCACTGT CGGAAACCTGCTGCAGTGTCTCTGCCGGATTTTCGACGTTGAAGAGATAGGCCTTGGGATCGCTGACGGT ATAGAAGACCGCGAACTGCACATTGATGACGCTTTTGTCGCTGGACAGCATCAAGCCGTTTGAAGACGAG GCCGAAGTCGCCCCGATATTCAGCTGCTGCACGGTCACCTTGACCGTCTCCACCGTTTCCATCGGCCAAA AGTGGAAATGCAGGCCCGGCATGGAAATCTCGTCCTTCGGCTTGCCGAACCGCAGTTCGACGCCGCGCTC GTCCGGCTGCACGACATAAATGCACTGGATCAGCCAGAAGACGGCGACAATCGCCACGACGACCACTGCC ACGCCGCCATTGAAGCCGCCGGGAATGATGTTGCGCAGCTGGTCCTGGCCGCGCCGGATGATATCTTCCA GATCAGGCGGTCCGCCCTTGCCGCCGCCACCGCGCGGCCGGTTCGGCCCCTGTCCCCATGGTCCCTGATT ATTACCGCCGCCGCCGCCCCAAGGGCCGCCGCCGCCATTCTGATTGCTCCAGGGCATCAAAACCTCGTTG TTCGTTAAGTCTCCACGCATCCGAAACCGTGGGGGCTGACCGGCGGACGCGTTGGTGACCGTTATAGGTA TCACCGCATCGGCTTTCAACGCAGCGTGAGAAACTTGGTCAATTTAATTGGAAAATAGTTCATTTTCAGG CGTAACGGCGTTCGTAGACGATGAAACGCGTGGGATAACTGTCCTTTTCGCCGGCCGGAACCGCGATCGC CTCCCCCGCCTGCCAGATGTCGGGATCGATCGCGGGAAACGACGCGTCTCCGTCCAGATCGACCTCGACA TGCGTGATGCACATCCGGTTGGCAAAACCGATCGCCTGGGCATAGACCTGCCCGCCGCCAATAATGCAGA TCTCGTCGACAGCGGTTTCGAGCGCCAGCCTGTCGGCCGCCGTCATCGCCTCGGGCAGCGAATGGGCCAT GGAGACATCAGGATGGTCTATCGCCGCTTGCCGCGAAATGACGACGTTCGGCCGTCCCGGCAGCGGCTTA CCGATCGAATCGTAAGTCTTGCGGCCCATCACGACAGGCTTTCCCAATGTCAGCGCCTTGAAGCGTTTGA GATCGCTCGAAAGCCGCCACGGCATATCGCCGTCGCGGCCGATAATGCCGTTGCGGGCAACGGCGGCGAT AATGGTCCTGCGGATGTCGGCCATGGAATATCCCGGATCAGACGGCGATCGGCGCCTTGATGCTGGCATC GGCCTCGTAGCCGATCAGCTCGAAATCGTCGAAGGTGAAGCCGAAAATGTCCTTCACATCAGGCTTGATG CGCATGAACGGTAGCGGCTTCGGCCGGCGCGCCAGCTGCAGCTTCGCCTGGTCGAAATGGTTGTGATAGA GATGGGCGTCGCCGAGCGTGTGGACGAAGTCGCCGGGCTTCAGCCCGACCACCTGAGCCACCATCATCGT CAGCAGCGCATAGGAGGAGATGTTGAACGGCACGCCGAGGAAGATATCGGCCGAGCGCTGGTAGAGCTGG CAGGAAAGCTTGCCGTCAGCCACATAGAACTGGAACAGGCAATGGCAGGGCGGCAGCGCCATTTCGTCCA CTTCGGCCGGATTCCAGGCCGAGACGATGTGGCGGCGCGAATTCGGGTTGTTGACGATGCCTTTGACGAG ATTGGCGATCTGGTCGATATGGCCGCCGTCGGGCGCTGGCCAGGAGCGCCACTGGGCGCCGTAGACCGGC CCGAGATCGCCGTTTTCATCGGCCCATTCGTCCCAGATCGAAACGCCGTTCTCCTTGAGATAGCGGATAT TCGTTTCGCCCTTCAGGAACCAGAGAAGCTCGTGGATGATCGAGCGCAGATGCAGCTTCTTCGTGGTGAG GACGGGAAAGCCCTCTTCGAGGTCGAAGCGCATCTGGTAACCGAAGACCGAGCGCGTGCCGGTGCCGGTG CGGTCACCCCGGTCGGAGCCCTTTTCCATCACATGATTCAAGAGATCGAGATATTGCTTCATGTCGCGCT GATTCCGTTTCGGCCAATTTAAGCCTTCGGAACCGGGAAACCAATCACCGGCGGGCATTTTCCCAATGTT TCTGATGGGTCGCATAACGCTTTTATGACGTTTGCCCTTCCCTTGGGCTGAGGAAACCACTATATCAGCG TTGCCGGCTTTCGGGTCGGCTATGGCGATAAATGAGCGGTGTAATAAACCTATTGGACCCGGGGGCGGTA CCCGGCGCCTCCACCAAAAACCGGCGGTCTTAAAGGCCGGCTTTTGATGGGGGCGAAACAGGATCGACAA GGGTGTAAAGATCGTCTTTTTGCTCGGCATTGTACCGCCGTTATCGGGCTAAAATTGTAGTTGCAAACGA CAACTATGCGGAAGCTCGTCTCGCTGCTTAATCGCGGTGTGACACTTCAATCAAAGTCCTAGTGGTTCGC ACCTCTAGGCGGGGTCCGAAGGCACCTGGCAACAGAAGCCTTCACCTTCTCCCTGCCGCCGAAATCATGT ATGTTGCTTAAAAACGTGACTCGGCTCCGGTCTTTCCCAAGGCGCCTGGACGTGGCATACAACCTTGTGA AAAGACTCCGAACCGACGAAAGACAGGAAAAGCATGGGGCAGGATCATATCCGCTACGACATTCTGGCAC AGGATGCACTTCGCGGCGTCATCCGCAAGGTATTGGCGGAAGTCGCAGCCACGGGCCGCCTGCCCGGTGA TCATCACTTCTTCATCACCTTCCTCACGGGCGCCACCGGCGTGCGCATCTCCCAGCACCTGAAGTCGAAA TACCCCGAGCAGATGACCATCGTCATCCAGCACCAGTTCTGGGATATGAAGATCACCGAGACGCATTTCG AGATCGGTCTTTCCTTCTCAGACGTTCCGGAAAAGCTGGTCATTCCATTCAATGCGATCCGCGGCTTCTA CGATCCCTCCGTCAACTTCGAGCTCGAATTCGACGTGCCGCTCGCCGATGGCGAAGAATTGCCGTCCGGA GAAATCACCGCCTATCCGGTGGATGCGGGCGGAAAGCCCGATGACGCCGCAGGCGCAAAACCCGCCGACG GCGAGGAGAAGAAACCGGGCTCCGTCGTCTCGCTCGACTCCTTCCGCAAGAAGCAGTGATTTGAAGGGAG GCCAAGCCTCCCTTTTTCGTGAGGGTCCAGGCAACCGCATGAGCGCCGAAATCATCAATCTGCGCCAGTT CCGCAAGAAGCAGGCTCGCTCCGAAAAGGAGAAGCAGGCCGAGCAGAACCGCATCTCTTTCGGCCGCACC AAGACCGAAAAGCAACTGACCCGCAGCCTGAACGAAAAGGCCGACAAAGCCCATCGCGACGGCCGGATCG AGGCGGATGACGACGGCGCGTGACGCTTTCACGCAAAGCGTGAAAAGCCGGAATGGATTCTGCGATCAGC CACTTGCGCACTTTCCTTGAATCGATCTGCCAACCCACGCTTAATTTGATAGAACGTCCTGAGCGCGTCG TTTCGGACGCGCTATGCTCTATCCGGGATGTGAAGGCCCCATGATTCGCAAGCATTCGGCGACATTGCAC GGCCATCGCACCAGTTTCTCGCTGGAGGATGAGTTCTGGGCTGAGCTGAAGACGATTGCCGGAGCCCGTT CGATACCGCTCGCCGCCATGATCTCCGAAATCGACGACCACCGCCCACCGGACAGCAACCTGTCCTCGGC GCTGCGCTTGCATGTGCTTTCCTGGCTGAAGGCCGGCGGCGACCGCAAGCCCTGACGCGGGGCATGATGC GCGTTGCTCAAGATCTGGTGGCGATTCGGGACGACGGCATCAATGAAAACAAAGGCCTGACGCGCTATGC ATGAATTAAATTCTATGCGCTTTCACTGCGCCTGAACGCCCGGCACCTGGTCGAAATTGAGCGGACCGGG CTGCGCTTGCCCACTGCGCCGTGCTGCTTCCGCCTCGGCCGCGGCTCTCGCCTGCGCATCCGCATCCGCC TTCGCTTTGGCTTCCGCCGCGCGTGCGGCCTCCGCCTCGGCAGCAGCCTTCTCAGCGGCTGCTTTCTGCG CCAGCGCGCGAAGCCGCTCTTCCTCCGCCTGCCGCTGTTGCTCGATCTCGGCCGCCTTCATGCGCTCGGC GTCGTTGAACCGGTAGAGCGCCACCTCGCGGCGCAGCCGCTGTTTTTCGAGCACGACCGCCTGCAGCCGC TCGACGCGCCGGCGCTCGCGCTCGAAGGCGCGCAGCGACAGATAGCTGGTGATATCGGTCACATCCATCG TCTTGCCGGGCGACAGCAGCATGCCGGAAAAATTCAGCCGAAGAGCCGGCTCGGCGCCGGAAAGCGCTTC CGTGCCGGGATTGAACCCGACACCCAGCGTCGCGCTGATCCGCTCTTCCGGCAGCGCGATCTGCGCATCG GCGGTGATGCGGGCGAGATCGTTGGCGACGGTGACATTCTGCACCCTCAGCGTCCCGTCGGCGATGTTGA AGGGGATGCCGAGTGGTGGCAGCTTCGCCTCGCCGTTGCTGAGCAGCGTCTCGATGATCGGATGCACCTT GCCGGCATTGATCTGCTCCTGCATCGTATCGGTCGCGGCAAGCAGCGGCGGCAAGATGGCAAGGTTCAAC CCGCGTATGCTGGTATCGCCGAGCCTCAGTTCGCCCGAACCATTGAGCGAGCTGGCGATCTCGCCGATCG TCTTGCCCGAGGCCTCCATCGACAGCGACAATCCGAACTTGCCGTTGGCGATCGGCGCGCCGTCGCGCAG CCAGACGACGCCGGAAAGATCGGAATCGGCAAGCGCAAGCTTCGTCTGCAGGAAACCTGTGCCGCTGGCA TTGGTGAAGAGCAGATTGCCGGAGAGCTTTCCGCCGTCCCAGTTCCCGGCCATGTCGTTGAGCTGCAGCT CGTCGCCCTTGTAGGCGACATTGCTGGTAAAGTCCGACACCGCCGTTTCCGGCAGGCCGAGCCAGAACTC TTTGGCCGCCAGCTTCACGTTGACGTCGAGATCCTTGAAGATGGGCAGCCCCAGCGCCGCCGTTGTCAGC TGACCGTTGGCGGGATCGACGATCTGACCGAACACCGCCTCGCCGAGCCAGCCGGCATCGACCTTGGAGA GTGTCAGCCCGCCGCTCGCGGTCGTCTTCGCAGCCTTCCGGTCGAAGCTCAGCGCACCGGAAAATTCGTT GTCAGCGGCATGTCCCTTGAGATCGGAAAAGACGATCTTGTCACTGTCGACGGCGGCATTGACCTGCAGG CCGAACGGCAGCCCGGTTCCGGTTTGCGGCAGGGCGATGCCGTTCATGATGAGATAGGGGTCGATATCGG CGCTGTCGAGCGAAAGCGCGATCTGGCCGTTCATGAAGGTCTCCGGCCGGACATCGACCTTGCCGTTGGC CATGAAAGAGGTCCGGTCGGTCGCAAAGGTCAGCGCCGCGTCGGCGGGATCATTGCCCGATGCCTTCACC TTCAGCGTCAGGCGGCCGTTGGCCCCGACATCGACCGGCAGCGGGTCGAGCCCGGCCTGGCCGAACAGGA CTGATGGCACGGCGTTTTCGAGCGTCGCCTCGAGGCTCGTCGTGCCGTTGCCGGTCAGCGCCAGGAGGTC GGACATGCGGTAATCGAGATTGACGCGGCTGCCGTTCGCCACACCGGCAAGCGTCACCGTCAGCGCATTG CCCTCGTCGCCGCCGAGCGTCAGCGCGCCGCGAAGCGCCGTATTGCCGTACCAGCCGGCGTTGCGCACCA GCCGGTCGAGCACCGGGTGATGCGGCAGGTGCTCGCGCAGCATGGTGAAGAAGCCGCCGGGATCGGCCGA TTTGAAGGTGATTTCGCCGGCACCCTTGTAATCGAGCAGCGAACCTTCCGCCCTGCCCGTCGCCGTCAGC TCGGCCCCGGCGATATTCTTGATCGACAGCCGGTCGACGGCGAGCGCCCCATCGGCGATCGTAAACGTGG TCTCCACATTCTCGGCACTGACGCCGAAGGCGGTGAACTTGTCGGCCTTGAGCTGGGCGGCGATCTTGTG GTCGAGCACGTTGTCGCCGGCATCCTGGCCGGTCATCAGCCCGCTCAGCGCCTGTAGCGCGTCGAGATCG AGCGTATCGCCGTTCAGCGCTACCGAAAGCGTCGGCGTCTGGCCGGAGATCGCCTGGCGCTCCAGCCGAC CCTTCAGCGTCGCCGGTCCGATGGCAATCTCGAGATTTTCGAAACGCTGCAATTCATGCGTCAGGCTGAC ATTGGCGGAAAAGCCCGCCTGCCGCAATTGCCGGATGGCCGGATCGACCGAGCCGGCAAGCCAGGAGGCA AGCCCCGTCGGCTGGCTGGATGCCACCACGATCTGGCCGTTGAACGAAGGTTCGCCCTGAAGCAGGAGCT TGCCCTTGCCTTCCACCTGCGTGCGCCCCGGCAGCGTGCCGATGGCGCTGTCGATCATCCAGCCGGTGCC GGCCGGTTCTAGCTCCAGCTGCACGTCGCGCAGCGTCGTATCGCCGGCGACGATCGCCGGCAGCTTGACG CTCGCCTTGCCCGGCACCTGCGGGATCGGCACTTGCGCGACGATATCGATCAGCGAATTCAGCCGTTGGC GTGCCGAAACAGCGGGATCCCGCGTCGTCTTGCCGGCCGAGCCCTGATTGCCGATGCGGTTGACGTCGAT CTGCTGCCCGTCGGCGGTCAGCAGAAATTCCGGCGCATTGCCGGTATCGAGCGTCGCCTCGCCGGTTATG ACATAGGGATCGTCCGTCGGACCGATCTCCATCCGGTATTCGGGAATGCGGATGCGTTCATTGGTGAGCT CGAAGCGGCCCTTGACGCGCGGCGGCTGCTCTTTCTTGTTGGCGGGCTTGGCGCTGTTGCGGATCTCGAC CGCTGCCGAAAGCTGGCCCTGATAGTTCGGCTTGCTGTCGACGAGCTTCAGCTCGCCATCGAGATCGACG CTGACAGGGTGCTTGTCCGGCGAAAGCCTCGTGCGCATGCGCAGCACGCCCTTCTCGTCCGGCTGACTGC TCGAGATCGAGAAGCCGCCGTGCTCGCCGTCGAGCGCAGCGTCGCCCTCGATGCGCCATGGGCCGGCCAG CGACTTTGCCGACATTTCCGCGTTGAGGCCGGTGATGCGACGCGAGCGACCCGACTGGTCGTCGATGAAC TCGACCTCGCCGCCGCTGACATGCACGTTTTCGAGAACGACCGTCCTTGCCGGTATTTCCGCGCGGCTGC CGCGCATCCAGTCGAGCGTGCCGTCCTTGAGCAATCTCAAGCGCACCTTCGGATTGACGACGCGCATGTC GAAGATCAGCGCTTCGCCCGACAGGAAAGGCGCGAGCTCCGCATCCATGGAGAACTGCTCGACCTTGACG ATCGGCGTGCCGTCCGCTTCCTGGCCGACGCGCACGTCATGCAGCGTTACCGACGGGAATGGCAGCAGGC GCGCATCCACCGTGCCGTAGACGGTGACCTTCTTGCCGATGATGCGGCTTGCCTGATCCTCGAAATTCTT GCGGAAATCCGTCCAGTCGATGAACAGCGGCGCAAGCAGCGCCACAAACAGCACTACGACGATCACTCCC CCCAGAAAGACGAGGAACCGGCCTACCAA
Region Details
| Region | 3 |
| Region Length | 11.2Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | protease |
| Region Position | 3017620-3028918 |
| # tRNA | 1 |
| # Total Proteins | 10 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 80% |
| # Bacterial Proteins | 2 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Bacill_Bobb_NC_024792(1) PHAGE_Burkho_phi52237_NC_007145(1) PHAGE_Erwini_phiEaH2_NC_019929(1) PHAGE_Cellul_phi10:1_NC_021802(1) PHAGE_Deep_s_D6E_NC_019544(1) PHAGE_Geobac_E2_NC_009552(1) PHAGE_Bacill_BCP8_2_NC_027355(1) PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1) PHAGE_Bacill_Bp8p_C_NC_029121(1) PHAGE_Bacill_phiAGATE_NC_020081(1) PHAGE_Burkho_phiE202_NC_009234(1) PHAGE_Bacill_Bcp1_NC_024137(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 10% |
| GC % | 61.93% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>4 4100121-4107310 ATGAAAACCATCGTCGTCTGCTCCGGCGGACTGGACTCCGTTACGCTTGCCCACAAGGTAGCAGCGGAAC AACAGCTTATCGGTCTCGTCTCCTTCGACTATGGCCAACGGCATCGCAAGGAACTCGACTTCGCCGCCAG ATGTGCCTCACGCCTCTCCGTTCCCCATCATATCATCGACATCGCCGGCATCGGCGGCCATCTCAGCGGA TCGGCCCTGACCGACAATGTCGAGGTTCCGGACGGCCACTACGCCGAGGAGACAATGAAAGCCACCGTCG TGCCCAACCGCAATGCGATCATGCTGGCAATCGCGTTCGGTTTGGCGGCCGCGCAAAAAGCAGATGCCGT TGCCGTCGCGGTGCATGGCGGCGACCACTTCATTTATCCGGACTGCCGGCCGGGCTTCATCGAGGCCTTC CAGCGCATGCAGAACGAAGCGCTGGAAGGTTATGCCAGCGTGAAACTGCTTGCACCCTATGTCGATGTTT CCAAAGCGGCGATCGTGGTTGACGGCGAAAAACACGGCACGCCGTTTTCGGAGACCTGGTCCTGCTACAA AGGCGGCGAGCCTCACTGTGGGCGCTGCGGAACCTGCGTGGAACGCCGTGAAGCTTTCCATCTTGCCGGC GTCCCCGATCCCACGGCGTACGAAGACCAGGATTTCTGGAAAGCGGCGATCTCGCGGTACTCGGCCACGG AGGTGCGTTGATGTACCGCATCACCAAGGAGTTTCATCTCTCCGCCTCCCATCAACTGGATCACCTGCCT GCCGACCATCAATGCGCTCGGCTTCACGGCCACAACTACGTCGTCATCGTCGAACTGGCTGCGGAAAACC TGAATGATGATGGCTTCGTCCGTGACTATCACGACCTCTCGCCGCTCAAGCGCTATATCGACGAGACTTT CGATCATCGTCACCTGAACGACGTCTTCGGCCATTCGAAAGTCACGTCGGAGTTCCTGGCAAGGCACTTT TACGACTGGTGCAAGCAGCGCTTTCCGGAGACATCGTCCGTTCGCGTCAGCGAGACGCCGAAAACCTGGG CGGAGTACAGGCCGTGAGCGTCGGAACCATTCGCGTCAGCGAGATCTTTGGCCCGACCATACAGGGTGAA GGCGCCTTGATCGGGCTGCCGACGGTGTTCGTGAGGACAGGCGGCTGTGACTATCGGTGTTCCTGGTGCG ACAGCCTTCACGCGGTCGAAAGCGCGTTCCGGGATCAATGGATTCCCATGTCCACTGAGGCGGTCTGGCA TAAGGTCACGGAACTCTCAGGGGGAAAGCCACTGACGGTTTCCCTTTCCGGAGGCAATCCGGCGATACAG CCCCTAAGGCCGCTTATCGAGCTTGGCCATTCGCAAGGATATCGCTTTGCCCTGGAAACACAGGGAAGCG TGGCCCAGGCCTGGTTTCGCGATCTCGACACCCTGGTTATCAGCCCCAAACCGCCATCAAGCGGAATGCT GACGGATTGGGATCAGGTGGACAACTGCCTTCAACTGGCCGCCGGCGGACCGGAGGTCGCATTGAAGATT GTTGTCTTCGACGATGCCGACTACGAATTCGCCCAGCGCGCGGGTCAGCGCTATCCCCAAATTCCCTTGT TCCTTCAGCCCGGCAACCATACGCCGCCACCGCCCGATGACCCCGATGATGATGACGATAACGCACGCAT TGATATCGACGGCGTGATGGATCGGATGCACTGGCTTGTCGAAAGGGTGACGGCCGACCAATGGTTTGAA GTCCGCGTACTGCCGCAATTGCACGTGCTGCTCTGGGGAAACAAGCGAGGCGTATGAGCCTGCCTGCGTT GAAAATCATGCAGCGACGCGCTCCGGAAAGGCGAAAACATCGACGGGCTCTCCAAGCCCGCGCAGCGGGA AGGTGCCGAGACTATCCATGTCCTTGGCGCAGCCCGCCATTTCGACAAAGGCCCGCGACAAGAGCACCGG ACGCTTGACCTCCTTGGTCAGGGTTTCCAGTCGCGAGGCGACATTGACCGCCGGGCCAATGACGGTGAAA TCCAGCCGCCGGCGCGAGCCGATATTGCCGTACATGACGTCGCCGACATGCACCCCGACGCCGTAGCGCA GCGGTTCGCGTCCGTTGCCCGCATATTGCTGGTTCAATTGCGCCATCAACGCCTGCCCTTCGCGGATCGC CTGCAGCAGATCGAGGCAAGCCGTTTCCTTGGCTAACGGGAAGATCGCCAGCAATCCGTCACCCATGAAC TTCAGGATCTCTCCGCCATGCCGCTCGATCGGATCTGACATGGCGTCGAAATAATCGTTGAGCAGATGGA TGACATCGTCGCGCGGCCAGAGATCGGAGATCGCCGTAAAGTCGCGCAGGTCGCAGATCATGATTGCCGC CCCGACAGTCGCGCCGCTGCCGCGCGTCGTGACGCCCGACAGGATCTGTTCGCTCGCATGCGGTCCCACA TAAGTCTGCAGCAGCGTACGCGCCATGATGTTCTTCAGCCGGATTTCGCTGACGAGGGTCAATGCCGGCA GCAGGTCGCGCAGGAAATCGACATGCTCGCTCGTAAAACCGCCCGGCCGGCTGGTCGAAAATGTCACGAC ATGCCGTTTGCCGAAAGTATGCTCGAGCGGCCAGGCGATATACTCTGTGAGGCCGTCATCGCGCAGTTCC TGATAGAATGAATCCTCGTCGCCGTCGGCTGTGCCTTCCAGCTGTCTACGCACCTCCTCCGAACCCTGAT GGATCGCGTTGACGGGGCTCTTCAGGAACTCCGGCGTATTTTCGACACCATAGGCGAAAGTGTTGATCTT CGCCTCTGCCAGGCCTTCCTTCCAGAGGATGCGGGCGCCGATCCATTGCGGATGGTTCGTCCTGAAATGC AATGTCACCCGCGCCACCGGCACGCCTGCCGCCAGCAGCTTCTCGCACATTTCCACCAGGATATTGTCGA TGAACCGCTCGCCGCGCGTATCATTCACCAGCCAGTCGAGAATCCGTCTTCTGCGGATCGGCCAGACGCC TTCTTCCGCAATATCGGCCTTGTTCGAAAAGGATTGCATCAAAAACTCCCGCTACGCCACATGATCGGCG AGTACCAAATTTAGTTTCCGCTGAATGTGGGCGATGGGAGAGCAAATGATAAGAGGCAGACGGCGATCAA GCCTCAGAAATCCCAATCCTCGTCTTCGGTCGCCACCGCCTTGCCGATCACATAGGAGGAACCGGAGCCG GAGAAGAAGTCGTGGTTCTCGTCGGCATTCGGCGAAAGCGCCGACAGGATCGCCGGATTGACCTTGCAGG CTTCAGCCGGGAACAGCGCCTCGTAGCCAAGGTTCATCAGCGCCTTGTTGGCATTGTAATGCAGGAATTT CTTGACATCCTCGGTCAGCCCGACGCCGTCATAGAGCGCTTCGGTATATTTCGCCTCGTTGTCATAGAGC TCGAGCAGCAGTTCGAAGGCGAAATCCTTGATCTCCTGCTTCCGCTCGTCGCCGAGGCGTTCCAGCCCGC GCTGGAACTTGTAGCCGATATAATAGCCGTGCACCGCCTCGTCGCGGATGATCAGCCGGATCATGTCGGC CGTGTTGGTCAGCTTGGCCCGGCTCGACCAGTACATCGGCAGGTAGAAGCCGGAATAGAACAGGAAGCTT TCGAGAAAAACACTCGCAACCTTCTTCTTCAACGGATCGCCGGAGCGATACTGCTCCATGATCAGCGCCG ATTTCCGCTGCAAGAACTCGTTCTCCTCCGACCAGCGATAGGCATCATCGACATCGGGCGTCGAGCACAG CGTCGAGAAGATCGACGAATAGGAGCGCGCATGCACCGCTTCCATGAAGGAGACGTTGGAAAGCACCGCC TCCTCATGCGGCGTCGCCGCGTCCTCCATCAGCCGGATGGAACCGACGCCGTTCTGGATCGTGTCGAGCA GCGTCAATCCGGTGAAGACACGGATGGTCAGCTGCTGTTCGGCCGCCGTCAGCGTTGCCCAGGAGGGAAT GTCGTTGGAAAGCGGCACCTTTTCCGGCAGCCAGAAATTGCCGGTGAGCCGGTTCCAGACTTCGAGATCC TTGTCGTCCTCGATGCGGTTCCAGTTGATGGCGCGCACGCGGCTGACCGGCTTCAATTGCATGTTCATTG TGTTCCCTCTTGAGAAATGTGTCGGGATTTGCCCCTCATCCGCCTGCCGGCACCGTTGCCTGGGTCGAGC CACTGGTCTCGACCCGTCCTTCGGACCCCCGCCAGCGGGGCGAAGGGGATATGCCGCACCCTTTTCCGTC TTTATTGCCGGTTCGTGTGGCAAGTCCCCTCTCCCCGTCAAAACGGGGAGAGGGTTAGGGTGAGGGGCAG ATGCTCCGGAGCGAAATATCAAATCACAGCGTACAAGACACGCAGCCCTGCACCTCGGTGCCGGACAGCG CCATCTGGCGAAGGCGGATGTAGTAGATCGTCTTGATGCCCTTCTTCCAGGCATGGATCTGCGCCTTGTT GATGTCGCGCGTCGTCGCCGTGTCGCGGAAGAACAAGGTCAGCGACAGGCCTTGGTCGACATGCTGGGTC GCCGCCGCATAGGTGTCGATGATCTTCTCCGGCCCGATCTCGTAGGCATCCTGATAGTAATCGAGATTAT CGTTGGTCATGAACGGCGCCGGATAATAGACGCGGCCGATCTTGCCTTCCTTGCGGATCTCGATCTTCGA GACGATCGGATGGATCGAGGAGGTCGAGTGGTTGATATAGGAGATCGAGCCTGTCGGCGGCACTGCCTGC AGGTTCTGGTTATAGAGGCCGGAGGCCATCACCAGTTTCTTCAGCGCCGCCCAGTCTTCCTGCGTCGGAA TGTGGATGTCCGCGGTCTCGAACAGCGCCTTCACCTTCTCCGTCGCCGGCTCCCAGAGCCGGTCGGTATA TTTGTCGAAATATTCGCCGGAGGCATATTTCGAGTTCTCGAAGCCCTTGAAGCTTGTGCCCCGTTCGACC GCCAGCAGGTTCGAGGCGCGGATCGCGTGATAGGTCACCGTATAGAAATAGATATTGGTGAAATCGACAC CTTCCTCGGAGCCGTAGAAGATGCGTTCGCGGGCGAGGTAACCGTGCAGGTTCATCTGGCCGAGACCGAT CGCATGGCTCTCGTCATTGCCCTTCTCGATCGAAGGAACCGAGGAGATGTGGCTCATGTCGGATACGGCC GTCAACGCCCGGATCGAGGTCTCGATCGTCTTGCCGAAATCGGCCGAATCCATTGCCGCGGCGATATTCA GCGAGCCGAGATTGCAGGAAATGTCCTTGCCCAGATGTTTGTAGGAGAGGTCGTCATGATATTCGCTGGC CTCGCTCACCTGCAGGATTTCCGAGCATAGATTGCTCATCGAAATGCGCCCGGCGATCGGGTTCGCCCGG TTCACCGTGTCCTCGAACATGATGTAGGGGTAACCGCTCTCGAACTGGATTTCGGCAAGCACCAGGAAGA ATTCGCGCGCCTTGATCTTCTTCTTGGAGATGCGGGCATCATCAGCCATCTCGCGGTACTTTTCCGTCAC CGAAATCTCGGTGAAGGGTACGCCATAGACGCGCTCCACGTCATAGGGCGAGAACAGGTACATATCCTCG TTGTTCTTGGCGAGTTCGAAGGTGATATCGGGCACGACGACGCCGAGCGACAGCGTCTTGATGCGGATCT TCTCGTCGGCATTTTCGCGCTTGGTGTCGAGGAAGCGCATGATGTCGGGGTGGTGGGCGTTGAGATAGAC GGCACCCGCCCCCTGCCGCGCGCCGAGCTGGTTGGCATAGGAGAAACTGTCTTCGAGCAGCTTCATGACA GGGATGATGCCCGAGGACTGGTTCTCGATATGCTTGATCGGCGCGCCCGCCTCGCGGATATTCGTCAGCG ACAGCGCCACGCCGCCGCCGCGCTTTGACAGTTGCAGCGCGGAATTGATCGACCGGCCGATCGATTCCAT ATTGTCCTCGACACGCAGCAGGAAGCAGGAAACCAGTTCGCCGCGCTGCTTCTTGCCGGCATTGAGGAAG GTCGGCGTCGCCGGCTGGAAGCGGCCGGAAATGATCTCTTCGACCATGTCGCGGGCAAGGGCCTCGTCGC CGCGCGCCAAGGCCAGCGCCACCATGCAGATGCGGTCCTCATAGCGCTCGAGATAGCGCTTTCCGTCGAA GGTCTTCAGCGTATAGCTGGTGTAGTATTTGAAGGCGCCGAGAAAGGTCGGGAAACGGAATTTCTTGGCA TAGGCCTGGTCGAACAGATCCCGCACGAAATTGAAGGAGTACTGGTCGAGAACCTCCTGCTCGTAATAGC CCTCGGTCACGAGGTAATCGAGCTTTTCCCGGAGATTGTGAAAGAACACCGTGTTCTGGTTCACATGCTG CAGGAAATATTGCTTGGCCGCCATTCGATCCTTGTCGAGCTGGATCCGCCCTTGATCATCATAGAGGTTC AGCATCGCATTCAGCGCGTGATAGTCGAGCGTTTCCGCCGCTTTCAAAGGGCGTTCGCCAGCGGGATGAG CAAGAGTGTTATGCGGTTTTGCGCCCGAATCCCGCGTCAGAGGTGTTCCCGTGTCCAAAACCGTTCCATC CCGTGTTTGACGTTGGCGACATCCGCTTCCGTGCCCAGCAGCTCGAACCTGTAAAGGTAAGGCACCTGGC ATTTCTGCGAGACCACATCGCCGGCGAGCCCGTATGTCTCGCCAAAATTGCTGTTGCCCGCGGCAATCAC GCCGCGGATGTGTCCTCGGTTTTCCGCATCGTTGAGGAAACGGATCACCTGCTTGGGAACGGCACCCTTG CCGCCGTCGCCACTATAGGTCGGCACGATCAGCACGAAGGGTTCGCGGATATGGAACGCGCCTGCTGCGC CACTTGGCGGAATGCGCGCCGCGCGCAGTCCGAGCTTGGCGACGAACCGATGGGTGTTCTCGGACCGGCT GGAATAATAGACGATCAAACCCATCGCTTTTCCTCAGGTCAGGAGAGCGCGCTGATCATGTCGGGACGGA AGCCCGCCCAATGCTGCTCGCCGGCGATGACGACAGGCGCCTGCATGTAGCCGAGGCTGCGGACGCGATC GAGCGCTTCGGCATCCTGCGAGATATCGACGATGTCATAATCGACACCCAGGCGGTCGAGGGCACGGTAG GTGGCGGTGCACTGGACGCAGGCAGGCTTGCTGTAGACGGTAATGGTCAT
Region Details
| Region | 4 |
| Region Length | 7.1Kb |
| Completeness(score) | incomplete(10) |
| Specific Keyword | NA |
| Region Position | 4100121-4107310 |
| # tRNA | 0 |
| # Total Proteins | 8 |
| # Phage Hit Proteins | 8 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 8 |
| Most Common Phage Name(hit genes count) | PHAGE_Bacill_BCD7_NC_019515(3) PHAGE_Bacill_Grass_NC_022771(2) PHAGE_Entero_phiEF24C_NC_009904(2) PHAGE_Bacill_phiNIT1_NC_021856(1) PHAGE_Gordon_Gsput1_NC_030932(1) PHAGE_Mycoba_Bipper_NC_031253(1) PHAGE_Gordon_Vendetta_NC_030911(1) PHAGE_Mycoba_Qyrzula_NC_008204(1) PHAGE_Bacill_Bp8p_C_NC_029121(1) PHAGE_Vibrio_VH7D_NC_023568(1) PHAGE_Gordon_Splinter_NC_030927(1) PHAGE_Lactoc_phiL47_NC_023574(1) PHAGE_Vibrio_ValKK3_NC_028829(1) PHAGE_Escher_Seurat_NC_027378(1) PHAGE_Gordon_OneUp_NC_030917(1) PHAGE_Strept_Dp_1_NC_015274(1) PHAGE_Mycoba_PegLeg_NC_021299(1) PHAGE_Mycoba_Myrna_NC_011273(1) PHAGE_Mycoba_Adler_NC_023591(1) PHAGE_Mycoba_Rosebush_NC_004684(1) PHAGE_Bacill_SPG24_NC_030903(1) PHAGE_Campyl_IBB35_NC_027989(1) PHAGE_Campyl_CP21_NC_019507(1) PHAGE_Pelagi_HTVC008M_NC_020484(1) PHAGE_Lactoc_WRP3_NC_027341(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 37.5% |
| GC % | 59.17% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|SIJQ01000001.1| Rhizobium leguminosarum strain SM3 chrom_SM3, whole genome shotgun 5052211, gc%: 61.04%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 8 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(274219..275220) | PHAGE_Mycoba_Muddy_NC_022054: RecA; ELG61_01455; phage(gi530545338) | 8.18e-10 | Showinfo_outline |
| 2 | complement(275220..276035) | PHAGE_Shigel_Ss_VASD_NC_028685: putative DNA primase; ELG61_01460; phage(gi966200456) | 1.07e-10 | Showinfo_outline |
| 3 | complement(276019..276279) | hypothetical protein; ELG61_01465 | 0.0 | Showinfo_outline |
| 4 | 276704..276949 | PHAGE_Burkho_phi6442_NC_009235: gp70; ELG61_01470; phage(gi134288655) | 5.58e-07 | Showinfo_outline |
| 5 | 276959..277306 | PHAGE_Burkho_phi6442_NC_009235: gp69; ELG61_01475; phage(gi134288626) | 1.33e-14 | Showinfo_outline |
| 6 | complement(277469..277807) | PROPHAGE_Xantho_306: ISxac2 transposase; ELG61_01480; phage(gi21244663) | 1.61e-20 | Showinfo_outline |
| 7 | complement(277755..279215) | HlyD family type I secretion periplasmic adaptor subunit; ELG61_01485 | 0.0 | Showinfo_outline |
| 8 | complement(279230..280945) | PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; ELG61_01490; phage(gi9630145) | 4.35e-20 | Showinfo_outline |
Sequence
>complement(274219..275220)
RhizobiumleguminosarumMAPLPKLAVRSDPTQPFKKLEPANDNVPIGDAIDAETLLGMDFAPVDYVVEGYIAEGLTILAGRPKLGKSWMALGFCIAVATGGRTLGADCEEGDVLYLALEDNRRRLKDRLEVVLSPATVRPNMSRLSLKTESKKIGAGLIEELETWRKSAGNPKLIVIDTLSMVRPPKKSNQDSYAADYDTISPLQKYAGEHRLAVIVVHHVRKAEAEDPLESVSGTNGLTGAADTIMVLNRTADGPKLYGRGRDIEEIEKALRFDKGTWEVLGNADDVKRSEQRRRIIEVLTDATTALTPTEIAKEAGMKETNVKYLLRVMVKAAEAEKVGYGQYKLAGR
Sequence
>complement(275220..276035)
RhizobiumleguminosarumMQIDIKQAAILLGGNVSGNRVLCPGPGHSKHDRSLSVTFNADGTFTTNSFAEDDFRDCRDHVKAKLGYTDARPIVHVAALPDLSELFDVRRRINDARRIWETTVPLKGTLAEVYLESRGLSYDGDALAFRPTCRSMVALMTDAMTGEPCGVHRTFLDAEGRKIDKKMRGRAKGAVVRLYELEAPFGLGIAEGIETALATDFRPVWAGLTAGGVAGLPALPHVEALTVFADHDRAGIQAANTVGERWHAAGREVTLVMPADAGRDFADREAA
Sequence
>complement(276019..276279)
RhizobiumleguminosarumMEILEFRPIDEPSGGHRAIAVFDLALTDECRLYGLRLLRMRDGRLLTFAPQSGHRRVATFASSLAAKITQLATDQHEAMTADADRH
Sequence
>276704..276949
RhizobiumleguminosarumMKKIAYSKAATKALRKMQPKRAAAIVARVEAFANGESVDLKKLQGSEFFRIRVGQDRVIIDDQTMQVLVIKAGPRGDIYNE
Sequence
>276959..277306
RhizobiumleguminosarumMGEIQKLTIDGKGYVLLSEDDYQDLVDISEARAAKARIGAGEETWPEDVVKALIAGEDPVRVFRKHRGMSIKELAEKSGLSQPYLSEIETGKKEGSLDALRSIASALDVDLDDVA
Sequence
>complement(277469..277807)
RhizobiumleguminosarumMPSDHSSTVSTEHFARTEAVMGKRKFDDDQITGILKEHQAGVTVADVCHKHGISEPTFYRWQSLQVGNAGLHAKRLRALEEENQKLKKLLAESMLSAATLSEMLAKTSKGRH
Sequence
>complement(277755..279215)
RhizobiumleguminosarumMALVQLDATPARFPNSSFPDSSGTGRRLAQRSTATAKQQTAYLPVIESKQRGPAPPSPMPGLRGAVWTGNLLILVFIVGLGIWSVLAPLKSAAIASGVIEPESSRKTIQHLEGGIVRRILVKNGDAVMGGQIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDRVAYPDDLRAAMDRYPSVSAILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRATISSQELDQVTILSAKGLERRSRLLNLQREKADLDGQQGQVEAQISRAYQVISGSQADLAKLESDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVIGAGEPLVDLLPRTDRLVVSAHVRPEDIHLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSADRLTDPQSGQPYFAATIRVTDERLAKMSDVELVAGMPTQTLIETGQSSVALYAVRPLLDSFNRAFRED
Sequence
>complement(279230..280945)
RhizobiumleguminosarumMTTISIKPPRPQTQLVVALRACAGAFGLVFLYSCGYNLFLLAPSIYLLQIYDRVLSSRSADTLLMLTMIIAIAVVVGSTLDIVRRAALSRIGSWLDHRLRPMVLTASFEYAARADTGAAAECYRDLAALRQFLDSPASSLFFDVPWAPLFLLLLFLVHPLLGTIGLLSAVALLLFAFMTELATREPLAHANLALSRSYLRFATALKNIEVIRAMGMQDGAALIVYRDAEMARRAQDIAMHRTEIILGFSKSIRTLAQILMMGSATWLVLANNGSPGIIFVASLLLGRGLAPIEGAIGAWRSLTFARNAFNRLNRMLISVASEHDARMVPRPEPNGLVLDNVSYFKPFADRPILTDITLRLAPGDCIALIGPSGSGKSTLGRIIAGVVPATSGYALLGGVDISALRLCGGTCHVGYLPQDIELFGGAIKDVIGRLDGGDPGKAIDAAKLVGLHEAIMRLPQGYETDIGEGGNLLLRAQRQQLGLARAAYGNPSLIVLDDPNSSLDYDGERMLFTAIERMKSRGMTVVIITHRMGILPVTNKIAIMRNGTVAAVGDSERIYETYLQPPSRTGT
Region 2, total 8 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 492494..493099 | PHAGE_Sinorh_phiM9_NC_028676: DNA-directed RNA polymerase specialized sigma subunit; ELG61_02535; phage(gi966199376) | 1.99e-12 | Showinfo_outline |
| 2 | 493096..493899 | anti-sigma factor; ELG61_02540 | 0.0 | Showinfo_outline |
| 3 | complement(494030..494893) | PHAGE_Entero_phi92_NC_023693: Phi92_gp066; ELG61_02545; phage(gi726646999) | 5.91e-117 | Showinfo_outline |
| 4 | complement(494890..495783) | PHAGE_Entero_phi92_NC_023693: Phi92_gp064; ELG61_02550; phage(gi726646997) | 1.50e-42 | Showinfo_outline |
| 5 | complement(495785..496840) | PHAGE_Entero_phi92_NC_023693: Phi92_gp067; ELG61_02555; phage(gi726647000) | 9.38e-117 | Showinfo_outline |
| 6 | complement(496854..497420) | PHAGE_Entero_phi92_NC_023693: Phi92_gp065; ELG61_02560; phage(gi726646998) | 3.49e-43 | Showinfo_outline |
| 7 | complement(497667..498587) | PHAGE_Synech_S_SKS1_NC_020851: GDP-L-fucose synthase; ELG61_02565; phage(gi472340899) | 1.53e-116 | Showinfo_outline |
| 8 | complement(498592..499674) | PHAGE_Synech_S_SKS1_NC_020851: GDP-D-mannose 4,6-dehydratase; ELG61_02570; phage(gi472340900) | 4.15e-179 | Showinfo_outline |
Sequence
>492494..493099
RhizobiumleguminosarumMSVARTHFPAYSRARMESPVHPAVSRDAGSAEAAIASEADIRSGLTENLARLWRYGLVLSHQRDVADDLVQATCLRALERADQFIPGTRLDRWLFSILHSIWLNEIRSRRVRQGQGFVDAGETLTFDGAHDTETHVMAGQVLKQVNALPEAQRTVVFLAYVEGLSYREVAGILDIPIGTVMSRLAAARAKLSDAGPEGGRQ
Sequence
>493096..493899
RhizobiumleguminosarumMTTKHTIPSDEDLTAFIDGELTAEEAARIEAIVNEDEGAAERLEFLARASLPFKQAFAPLLAEAPRAKLETMLAAIPPQQSAKSGLTPAFATRRRFLGALAASLVAGIAIDRAVIGIGARFSAKDENSEWRAVVADYISLYTRESLAGPVPSTEDQAAQLAGLDEKLGLSLSPEAVSLPGVDFKRALLLQYDGKALAQIAYLDPETGPMALCIVKSDKGPKAPDLESRKGMNVVYWSNATHAFMLIGRIPVDRMKELGEDVSKRLSA
Sequence
>complement(494030..494893)
RhizobiumleguminosarumMKGIVLAGGSGSRLHPMTHAVSKQLLPIYDKPMIYYPLTTLMLAGIREVLIISTPHDMPLFQRLLGDGSEWGMSLSYAVQPSPDGLAQAYIIGADFVAGGPSCLILGDNIYFGHGLPELLEEGVSKGDGATIFAYHVHDPERYGVVEFGGDMTAISIEEKPAKPKSHWAVTGLYFYDADVVDIAANLKPSARGEYEITDVNKTYLERGKLRVSMMGRGYAWLDTGTPESLLEAGGFVRTLEKRQGFKIACPEEIALAKGFITKEHFAQIAAKAGNGDYGQYLRGLLD
Sequence
>complement(494890..495783)
RhizobiumleguminosarumMRIAVTGKSGQVTSALQALNMPGIEIIAIGRPELDLLEPSMVSEIIAKIKPEVVVSSAAYTAVDKAESDEAAAFAINRDGAKAIAAATAELSLPVIHLSTDYVFDGDKPECYVESDPVGPVSVYGRSKLEGEYAVAAANENHVILRTAWVYSTFGHNFVKTMLRLAETREELSVVGDQLGCPTSAGDIAGAIVKIAGRLSNDSSPDLRGVFHLAGSGETSWAGFARYILSIHQEKTGRRVTVKDIATADYPTAAKRPANSRLCCDKLKSLYSVSMPEWRISVRAAVTKLLEEPKEAV
Sequence
>complement(495785..496840)
RhizobiumleguminosarumMRVLVTGGAGFIGSALVRYLVSDIGAEVLNIDKLTYAGNLASLKTIENAPNYRFLKADICDRSAVCNAFEEFRPDYVMHLAAESHVDRSITGAADFIETNVNGTFSVLEAARQYWERLPPHAKAAFKMLHVSTDEVYGSLGEDGFFAETTAYDPSSPYSASKAASDHLATAWERTYGLPVIISNCSNNYGPFHFPEKLIPLIILNALERKPLPVYGSGANIRDWLYVDDHARALWLIVQRGRPGEKYNVGGRNERRNIEVVERVCAIMDEVRPGTAPHSDLISYVADRPGHDARYAIDATKLETELGWRAQENFDSGIRKTVEWYLENAWWWQPLRERVYSGERLGVLKKV
Sequence
>complement(496854..497420)
RhizobiumleguminosarumMYALKVEQLEIGDVKKVTPARFGDSRGYFSEVFKDFWFRTNVADVSFVQDNESLSAQPGTVRGLHFQLPPFAQGKLVRCLRGALLDVAVDIRHGSPTYGKWVSAELSPENGSQLWVPAGFAHGFVTLEPDTIISYKVTALYSAEHDCGVRWNDAEIGIEWPQMDGYVLSDKDNKQPLLSELPTYFQFS
Sequence
>complement(497667..498587)
RhizobiumleguminosarumMNRDVKIYVAGHRGMVGSAIVRRLKAGGYTNIVTRSHAELDLVNQAAVTEFMKTERPDYIFMAAARVGGIHANNVYRAEFLYQNLMIETNVVHAAWQAGVERMLFLGSSCIYPRDCPQPIREEYLLTGPLEQTNEPYAIAKIAGVKLCESYNRQYGTRYVSGMPTNLYGPNDNYDLDSSHVMPALIRKVHEAKIRGDRQLVVWGSGRPMREFLYVDDMADACVFLMEKEVSEGLINIGTGEDITIRELAETIMRVVGFTGEIVYDQTKPDGTPRKLMSVDRLSALGWKATTSLGDGIARAYADFAS
Sequence
>complement(498592..499674)
RhizobiumleguminosarumMKRALITGITGQDGSYLAELLIEKGYEVHGIKRRTSLFNTDRIDHLYQDPHDTNRRLVLHYGDMTDSSSLVRIVQQVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRILGLEKKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYREAYGIYACNGILFNHESPVRGETFVTRKITRALARIKLGLQDCLYLGNLDAKRDWGHAKDYVEMQWLMLQQDEPEDFVIATGVQYSVREFVDAAAHEIGLPISWKGSGAEEKGYDENGRCIVAVDPRYFRPTEVETLLGDPSKAKEKLGWEPRITFKQLVEEMMREDLKSAERDELVKRHGFSAYDYHE
Region 3, total 11 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 3017620..3017907 | PHAGE_Burkho_phi52237_NC_007145: hypothetical protein; ELG61_15490; phage(gi117676336) | 1.51e-08 | Showinfo_outline |
| 2 | complement(3017923..3019623) | PROPHAGE_Shewan_MR-1: serine protease; ELG61_15495; phage(gi24375430) | 1.47e-79 | Showinfo_outline |
| 3 | complement(3019825..3020790) | PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; ELG61_15500; phage(gi15834405) | 2.73e-45 | Showinfo_outline |
| 4 | complement(3020794..3021876) | PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; ELG61_15505; phage(gi15834404) | 2.87e-55 | Showinfo_outline |
| 5 | complement(3022025..3022543) | PHAGE_Bacill_phiAGATE_NC_020081: putative dihydrofolate reductase; ELG61_15510; phage(gi448260875) | 6.85e-33 | Showinfo_outline |
| 6 | complement(3022557..3023351) | PHAGE_Geobac_E2_NC_009552: putative thymidylate synthase; ELG61_15515; phage(gi148747783) | 2.99e-128 | Showinfo_outline |
| 7 | 3023491..3023831 | tRNA | 0.0 | Showinfo_outline |
| 8 | 3023953..3024468 | hypothetical protein; ELG61_15525 | 0.0 | Showinfo_outline |
| 9 | 3024518..3024712 | DUF4169 family protein; ELG61_15530 | 0.0 | Showinfo_outline |
| 10 | 3024870..3025094 | aryl-sulfate sulfotransferase; ELG61_15535 | 0.0 | Showinfo_outline |
| 11 | complement(3025202..3028918) | PHAGE_Cellul_phi10:1_NC_021802: hypothetical protein; ELG61_15540; phage(gi526178114) | 7.37e-06 | Showinfo_outline |
Sequence
>3017620..3017907
RhizobiumleguminosarumMSNGPLTDAQLAELQALEKLSDEDIDTGDIPEITDEQWRLARKGNLYRPLKQSVTIRVDADILDWFKSHAGGRGYQTDINAALRTHIARHQKGSG
Sequence
>complement(3017923..3019623)
RhizobiumleguminosarumMAPTIRSPIRRTLALMASAAILAQAGVSGIAYAQTAPETTAPGVTAPAPTPPAPAAPQQTAPIQAAVPNTGPASVADLAEGLLDAVVNISTSQKVKDDEGAGPAPRAPDGSPFQEFFNDFFNKQQGNKGGNHNVSSLGSGFVIDPAGYIVTNNHVIEGADDIEINFANGSKLKAKLIGTDTKTDLSVLKVEPKTPLKSVKFGDSSTMRIGDWVMAIGNPFGFGGSVTVGIISGRGRNINAGPYDNFIQTDAAINKGNSGGPLFNMKGEVIGINTAIISPSGGSIGIGFSVPSELASGVVDQLREYGETRRGWLGVRIQPVTDDIADSLGLDTAKGALVAGVIKGGPVDDGSIKAGDVILKFDGKTVSEMRDLPRVVAESTVGKEVDVVVLRDGKEQTVKVKLGRLEDSDQAAASGDSAPDGSQDDGVITPDPGENNDMDQPDTGDQAKPAPDTPDQHKGQVSPDAATPKNVLGLSLSLLSAETRKAFGIAESVDGVVVTEVTPGSASAEKGLKPGDVIVEVAQEFMKSPDAVAAKVQALKQEGRRNAQLMIASANGDLRFVAVPME
Sequence
>complement(3019825..3020790)
RhizobiumleguminosarumMTSNRLPIIFIILAIVLVGLYSSIFVVNAREQAIVVRFGQIQSVKTEPGIYFKLPFGFMDADRVQLVEKQALRLDLDNIRVQVQDGQTFDVDAFVIYNIADVRRFRETVSGDREAAEARLRAQLDSSLRRVYGLRDYNAALSEERVAMMLEIRDDLRTDAENLGLHIDDVRIRRTDLSPEVAPNTYNAMRSERLAEAERIRAEGNEEGQRRRAIADRQVVEFTAGAQRDAEILRGQGDAERNRVFAEVFSKDPAFFEFYRSMAAYSSALSSQDTTLVLSPNSEFFRYFDNAAGTLQPTNPAAPVPGVPGAAAPAAPAQPAN
Sequence
>complement(3020794..3021876)
RhizobiumleguminosarumMPWSNQNGGGGPWGGGGGNNQGPWGQGPNRPRGGGGKGGPPDLEDIIRRGQDQLRNIIPGGFNGGVAVVVVAIVAVFWLIQCIYVVQPDERGVELRFGKPKDEISMPGLHFHFWPMETVETVKVTVQQLNIGATSASSSNGLMLSSDKSVINVQFAVFYTVSDPKAYLFNVENPAETLQQVSDSAMREIVGRRPAQDAFRSNRQPIEVDVLNILQDTMNRYGAGVTVTGVTIQNVAPPREVADAFEEVQRAGRDRDSTIEEANRYTNQKLGQARGDAARIREDAAAYKDRVVKEAEGEAQRFTAINDEYSKAPDVTRKRLYLETMEQVLKNSRKVIIDEKQGVLPYLPLNELGKPAQQGG
Sequence
>complement(3022025..3022543)
RhizobiumleguminosarumMADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGKPVVMGRKTYDSIGKPLPGRPNVVISRQAAIDHPDVSMAHSLPEAMTAADRLALETAVDEICIIGGGQVYAQAIGFANRMCITHVEVDLDGDASFPAIDPDIWQAGEAIAVPAGEKDSYPTRFIVYERRYA
Sequence
>complement(3022557..3023351)
RhizobiumleguminosarumMKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELLWFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIVNNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISSYALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIFGFTFDDFELIGYEADASIKAPIAV
Sequence
>3023491..3023831
ATATCAGCGTTGCCGGCTTTCGGGTCGGCTATGGCGATAAATGAGCGGTGTAATAAACCTATTGGACCCGGGGGCGGTACCCGGCGCCTCCACCAAAAACCGGCGGTCTTAAAGGCCGGCTTTTGATGGGGGCGAAACAGGATCGACAAGGGTGTAAAGATCGTCTTTTTGCTCGGCATTGTACCGCCGTTATCGGGCTAAAATTGTAGTTGCAAACGACAACTATGCGGAAGCTCGTCTCGCTGCTTAATCGCGGTGTGACACTTCAATCAAAGTCCTAGTGGTTCGCACCTCTAGGCGGGGTCCGAAGGCACCTGGCAACAGAAGCCTTCACCTTCTCC
Sequence
>3023953..3024468
RhizobiumleguminosarumMGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKYPEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPLADGEELPSGEITAYPVDAGGKPDDAAGAKPADGEEKKPGSVVSLDSFRKKQ
Sequence
>3024518..3024712
RhizobiumleguminosarumMSAEIINLRQFRKKQARSEKEKQAEQNRISFGRTKTEKQLTRSLNEKADKAHRDGRIEADDDGA
Sequence
>3024870..3025094
RhizobiumleguminosarumMIRKHSATLHGHRTSFSLEDEFWAELKTIAGARSIPLAAMISEIDDHRPPDSNLSSALRLHVLSWLKAGGDRKP
Sequence
>complement(3025202..3028918)
RhizobiumleguminosarumMVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLPFPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAKSLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKLVDSKPNYQGQLSAAVEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGEATLDTGNAPEFLLTADGQQIDVNRIGNQGSAGKTTRDPAVSARQRLNSLIDIVAQVPIPQVPGKASVKLPAIVAGDTTLRDVQLELEPAGTGWMIDSAIGTLPGRTQVEGKGKLLLQGEPSFNGQIVVASSQPTGLASWLAGSVDPAIRQLRQAGFSANVSLTHELQRFENLEIAIGPATLKGRLERQAISGQTPTLSVALNGDTLDLDALQALSGLMTGQDAGDNVLDHKIAAQLKADKFTAFGVSAENVETTFTIADGALAVDRLSIKNIAGAELTATGRAEGSLLDYKGAGEITFKSADPGGFFTMLREHLPHHPVLDRLVRNAGWYGNTALRGALTLGGDEGNALTVTLAGVANGSRVNLDYRMSDLLALTGNGTTSLEATLENAVPSVLFGQAGLDPLPVDVGANGRLTLKVKASGNDPADAALTFATDRTSFMANGKVDVRPETFMNGQIALSLDSADIDPYLIMNGIALPQTGTGLPFGLQVNAAVDSDKIVFSDLKGHAADNEFSGALSFDRKAAKTTASGGLTLSKVDAGWLGEAVFGQIVDPANGQLTTAALGLPIFKDLDVNVKLAAKEFWLGLPETAVSDFTSNVAYKGDELQLNDMAGNWDGGKLSGNLLFTNASGTGFLQTKLALADSDLSGVVWLRDGAPIANGKFGLSLSMEASGKTIGEIASSLNGSGELRLGDTSIRGLNLAILPPLLAATDTMQEQINAGKVHPIIETLLSNGEAKLPPLGIPFNIADGTLRVQNVTVANDLARITADAQIALPEERISATLGVGFNPGTEALSGAEPALRLNFSGMLLSPGKTMDVTDITSYLSLRAFERERRRVERLQAVVLEKQRLRREVALYRFNDAERMKAAEIEQQRQAEEERLRALAQKAAAEKAAAEAEAARAAEAKAKADADAQARAAAEAEAARRSGQAQPGPLNFDQVPGVQAQ
Region 4, total 8 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 4100121..4100831 | PHAGE_Mycoba_Rosebush_NC_004684: gp3; ELG61_20590; phage(gi29566196) | 1.02e-48 | Showinfo_outline |
| 2 | 4100831..4101187 | PHAGE_Bacill_BCD7_NC_019515: 6-pyruvoyl tetrahydrobiopterin synthase; ELG61_20595; phage(gi422935983) | 4.50e-06 | Showinfo_outline |
| 3 | 4101184..4101927 | PHAGE_Mycoba_Bipper_NC_031253: hypothetical protein; ELG61_20600; phage(gi100006) | 1.29e-13 | Showinfo_outline |
| 4 | complement(4101946..4103169) | PHAGE_Pelagi_HTVC008M_NC_020484: adenylate/guanylyl cyclase; ELG61_20605; phage(gi460042455) | 1.10e-16 | Showinfo_outline |
| 5 | complement(4103274..4104248) | PHAGE_Mycoba_PegLeg_NC_021299: NrdG; ELG61_20610; phage(gi508177953) | 4.63e-179 | Showinfo_outline |
| 6 | complement(4104484..4106688) | PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; ELG61_20615; phage(gi589890883) | 0.0 | Showinfo_outline |
| 7 | complement(4106667..4107074) | PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; ELG61_20620; phage(gi100023) | 5.33e-17 | Showinfo_outline |
| 8 | complement(4107089..4107310) | PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; ELG61_20625; phage(gi589892251) | 9.72e-25 | Showinfo_outline |
Sequence
>4100121..4100831
RhizobiumleguminosarumMKTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLSVPHHIIDIAGIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKADAVAVAVHGGDHFIYPDCRPGFIEAFQRMQNEALEGYASVKLLAPYVDVSKAAIVVDGEKHGTPFSETWSCYKGGEPHCGRCGTCVERREAFHLAGVPDPTAYEDQDFWKAAISRYSATEVR
Sequence
>4100831..4101187
RhizobiumleguminosarumMYRITKEFHLSASHQLDHLPADHQCARLHGHNYVVIVELAAENLNDDGFVRDYHDLSPLKRYIDETFDHRHLNDVFGHSKVTSEFLARHFYDWCKQRFPETSSVRVSETPKTWAEYRP
Sequence
>4101184..4101927
RhizobiumleguminosarumMSVGTIRVSEIFGPTIQGEGALIGLPTVFVRTGGCDYRCSWCDSLHAVESAFRDQWIPMSTEAVWHKVTELSGGKPLTVSLSGGNPAIQPLRPLIELGHSQGYRFALETQGSVAQAWFRDLDTLVISPKPPSSGMLTDWDQVDNCLQLAAGGPEVALKIVVFDDADYEFAQRAGQRYPQIPLFLQPGNHTPPPPDDPDDDDDNARIDIDGVMDRMHWLVERVTADQWFEVRVLPQLHVLLWGNKRGV
Sequence
>complement(4101946..4103169)
RhizobiumleguminosarumMQSFSNKADIAEEGVWPIRRRRILDWLVNDTRGERFIDNILVEMCEKLLAAGVPVARVTLHFRTNHPQWIGARILWKEGLAEAKINTFAYGVENTPEFLKSPVNAIHQGSEEVRRQLEGTADGDEDSFYQELRDDGLTEYIAWPLEHTFGKRHVVTFSTSRPGGFTSEHVDFLRDLLPALTLVSEIRLKNIMARTLLQTYVGPHASEQILSGVTTRGSGATVGAAIMICDLRDFTAISDLWPRDDVIHLLNDYFDAMSDPIERHGGEILKFMGDGLLAIFPLAKETACLDLLQAIREGQALMAQLNQQYAGNGREPLRYGVGVHVGDVMYGNIGSRRRLDFTVIGPAVNVASRLETLTKEVKRPVLLSRAFVEMAGCAKDMDSLGTFPLRGLGEPVDVFAFPERVAA
Sequence
>complement(4103274..4104248)
RhizobiumleguminosarumMNMQLKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGSIRLMEDAATPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSEENEFLQRKSALIMEQYRSGDPLKKKVASVFLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKYTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDEDWDF
Sequence
>complement(4104484..4106688)
RhizobiumleguminosarumMDTGTPLTRDSGAKPHNTLAHPAGERPLKAAETLDYHALNAMLNLYDDQGRIQLDKDRMAAKQYFLQHVNQNTVFFHNLREKLDYLVTEGYYEQEVLDQYSFNFVRDLFDQAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRICMVALALARGDEALARDMVEEIISGRFQPATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKHIENQSSGIIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIMRFLDTKRENADEKIRIKTLSLGVVVPDITFELAKNNEDMYLFSPYDVERVYGVPFTEISVTEKYREMADDARISKKKIKAREFFLVLAEIQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEASEYHDDLSYKHLGKDISCNLGSLNIAAAMDSADFGKTIETSIRALTAVSDMSHISSVPSIEKGNDESHAIGLGQMNLHGYLARERIFYGSEEGVDFTNIYFYTVTYHAIRASNLLAVERGTSFKGFENSKYASGEYFDKYTDRLWEPATEKVKALFETADIHIPTQEDWAALKKLVMASGLYNQNLQAVPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPAPFMTNDNLDYYQDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQIHAWKKGIKTIYYIRLRQMALSGTEVQGCVSCTL
Sequence
>complement(4106667..4107074)
RhizobiumleguminosarumMGLIVYYSSRSENTHRFVAKLGLRAARIPPSGAAGAFHIREPFVLIVPTYSGDGGKGAVPKQVIRFLNDAENRGHIRGVIAAGNSNFGETYGLAGDVVSQKCQVPYLYRFELLGTEADVANVKHGMERFWTREHL
Sequence
>complement(4107089..4107310)
RhizobiumleguminosarumMTITVYSKPACVQCTATYRALDRLGVDYDIVDISQDAEALDRVRSLGYMQAPVVIAGEQHWAGFRPDMISALS
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
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Length: 5052211 bps
Phages: 4
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: ELG61_01455 (Region 1)
Locus: ELG61_01455ORF Start: 274219
ORF Stop: 275220
Strand: Backward
Protein Sequence: MAPLPKLAVRSDPTQPFKKLEPANDNVPIGDAIDAETLLGMDFAPVDYVVEGYIAEGLTILAGRPKLGKSWMALGFCIAVATGGRTLGADCEEGDVLYLALEDNRRRLKDRLEVVLSPATVRPNMSRLSLKTESKKIGAGLIEELETWRKSAGNPKLIVIDTLSMVRPPKKSNQDSYAADYDTISPLQKYAGEHRLAVIVVHHVRKAEAEDPLESVSGTNGLTGAADTIMVLNRTADGPKLYGRGRDIEEIEKALRFDKGTWEVLGNADDVKRSEQRRRIIEVLTDATTALTPTEIAKEAGMKETNVKYLLRVMVKAAEAEKVGYGQYKLAGR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_01455, RecA, phage(gi530545338), PHAGE_Mycoba_Muddy_NC_022054
Homolog/Ortholog E-Value: 8.18e-10
Locus 2: ELG61_01460 (Region 1)
Locus: ELG61_01460ORF Start: 275220
ORF Stop: 276035
Strand: Backward
Protein Sequence: MQIDIKQAAILLGGNVSGNRVLCPGPGHSKHDRSLSVTFNADGTFTTNSFAEDDFRDCRDHVKAKLGYTDARPIVHVAALPDLSELFDVRRRINDARRIWETTVPLKGTLAEVYLESRGLSYDGDALAFRPTCRSMVALMTDAMTGEPCGVHRTFLDAEGRKIDKKMRGRAKGAVVRLYELEAPFGLGIAEGIETALATDFRPVWAGLTAGGVAGLPALPHVEALTVFADHDRAGIQAANTVGERWHAAGREVTLVMPADAGRDFADREAA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_01460, putative DNA primase, phage(gi966200456), PHAGE_Shigel_Ss_VASD_NC_028685
Homolog/Ortholog E-Value: 1.07e-10
Locus 3: ELG61_01465 (Region 1)
Locus: ELG61_01465ORF Start: 276019
ORF Stop: 276279
Strand: Backward
Protein Sequence: MEILEFRPIDEPSGGHRAIAVFDLALTDECRLYGLRLLRMRDGRLLTFAPQSGHRRVATFASSLAAKITQLATDQHEAMTADADRH
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_01465, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: ELG61_01470 (Region 1)
Locus: ELG61_01470ORF Start: 276704
ORF Stop: 276949
Strand: Forward
Protein Sequence: MKKIAYSKAATKALRKMQPKRAAAIVARVEAFANGESVDLKKLQGSEFFRIRVGQDRVIIDDQTMQVLVIKAGPRGDIYNE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_01470, gp70, phage(gi134288655), PHAGE_Burkho_phi6442_NC_009235
Homolog/Ortholog E-Value: 5.58e-07
Locus 5: ELG61_01475 (Region 1)
Locus: ELG61_01475ORF Start: 276959
ORF Stop: 277306
Strand: Forward
Protein Sequence: MGEIQKLTIDGKGYVLLSEDDYQDLVDISEARAAKARIGAGEETWPEDVVKALIAGEDPVRVFRKHRGMSIKELAEKSGLSQPYLSEIETGKKEGSLDALRSIASALDVDLDDVA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_01475, gp69, phage(gi134288626), PHAGE_Burkho_phi6442_NC_009235
Homolog/Ortholog E-Value: 1.33e-14
Locus 6: ELG61_01480 (Region 1)
Locus: ELG61_01480ORF Start: 277469
ORF Stop: 277807
Strand: Backward
Protein Sequence: MPSDHSSTVSTEHFARTEAVMGKRKFDDDQITGILKEHQAGVTVADVCHKHGISEPTFYRWQSLQVGNAGLHAKRLRALEEENQKLKKLLAESMLSAATLSEMLAKTSKGRH
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: ELG61_01480, ISxac2 transposase, phage(gi21244663), PROPHAGE_Xantho_306
Homolog/Ortholog E-Value: 1.61e-20
Locus 7: ELG61_01485 (Region 1)
Locus: ELG61_01485ORF Start: 277755
ORF Stop: 279215
Strand: Backward
Protein Sequence: MALVQLDATPARFPNSSFPDSSGTGRRLAQRSTATAKQQTAYLPVIESKQRGPAPPSPMPGLRGAVWTGNLLILVFIVGLGIWSVLAPLKSAAIASGVIEPESSRKTIQHLEGGIVRRILVKNGDAVMGGQIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDRVAYPDDLRAAMDRYPSVSAILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRATISSQELDQVTILSAKGLERRSRLLNLQREKADLDGQQGQVEAQISRAYQVISGSQADLAKLESDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVIGAGEPLVDLLPRTDRLVVSAHVRPEDIHLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSADRLTDPQSGQPYFAATIRVTDERLAKMSDVELVAGMPTQTLIETGQSSVALYAVRPLLDSFNRAFRED
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: ELG61_01485, HlyD family type I secretion periplasmic adaptor subunit
Homolog/Ortholog E-Value: N/A
Locus 8: ELG61_01490 (Region 1)
Locus: ELG61_01490ORF Start: 279230
ORF Stop: 280945
Strand: Backward
Protein Sequence: MTTISIKPPRPQTQLVVALRACAGAFGLVFLYSCGYNLFLLAPSIYLLQIYDRVLSSRSADTLLMLTMIIAIAVVVGSTLDIVRRAALSRIGSWLDHRLRPMVLTASFEYAARADTGAAAECYRDLAALRQFLDSPASSLFFDVPWAPLFLLLLFLVHPLLGTIGLLSAVALLLFAFMTELATREPLAHANLALSRSYLRFATALKNIEVIRAMGMQDGAALIVYRDAEMARRAQDIAMHRTEIILGFSKSIRTLAQILMMGSATWLVLANNGSPGIIFVASLLLGRGLAPIEGAIGAWRSLTFARNAFNRLNRMLISVASEHDARMVPRPEPNGLVLDNVSYFKPFADRPILTDITLRLAPGDCIALIGPSGSGKSTLGRIIAGVVPATSGYALLGGVDISALRLCGGTCHVGYLPQDIELFGGAIKDVIGRLDGGDPGKAIDAAKLVGLHEAIMRLPQGYETDIGEGGNLLLRAQRQQLGLARAAYGNPSLIVLDDPNSSLDYDGERMLFTAIERMKSRGMTVVIITHRMGILPVTNKIAIMRNGTVAAVGDSERIYETYLQPPSRTGT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_01490, ABC transporter, phage(gi9630145), PHAGE_Bacill_SPbeta_NC_001884
Homolog/Ortholog E-Value: 4.35e-20
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Click on a sequence to see details.
Locus 1: ELG61_02535 (Region 2)
Locus: ELG61_02535ORF Start: 492494
ORF Stop: 493099
Strand: Forward
Protein Sequence: MSVARTHFPAYSRARMESPVHPAVSRDAGSAEAAIASEADIRSGLTENLARLWRYGLVLSHQRDVADDLVQATCLRALERADQFIPGTRLDRWLFSILHSIWLNEIRSRRVRQGQGFVDAGETLTFDGAHDTETHVMAGQVLKQVNALPEAQRTVVFLAYVEGLSYREVAGILDIPIGTVMSRLAAARAKLSDAGPEGGRQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02535, DNA-directed RNA polymerase specialized sigma subunit, phage(gi966199376), PHAGE_Sinorh_phiM9_NC_028676
Homolog/Ortholog E-Value: 1.99e-12
Locus 2: ELG61_02540 (Region 2)
Locus: ELG61_02540ORF Start: 493096
ORF Stop: 493899
Strand: Forward
Protein Sequence: MTTKHTIPSDEDLTAFIDGELTAEEAARIEAIVNEDEGAAERLEFLARASLPFKQAFAPLLAEAPRAKLETMLAAIPPQQSAKSGLTPAFATRRRFLGALAASLVAGIAIDRAVIGIGARFSAKDENSEWRAVVADYISLYTRESLAGPVPSTEDQAAQLAGLDEKLGLSLSPEAVSLPGVDFKRALLLQYDGKALAQIAYLDPETGPMALCIVKSDKGPKAPDLESRKGMNVVYWSNATHAFMLIGRIPVDRMKELGEDVSKRLSA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: ELG61_02540, anti-sigma factor
Homolog/Ortholog E-Value: N/A
Locus 3: ELG61_02545 (Region 2)
Locus: ELG61_02545ORF Start: 494030
ORF Stop: 494893
Strand: Backward
Protein Sequence: MKGIVLAGGSGSRLHPMTHAVSKQLLPIYDKPMIYYPLTTLMLAGIREVLIISTPHDMPLFQRLLGDGSEWGMSLSYAVQPSPDGLAQAYIIGADFVAGGPSCLILGDNIYFGHGLPELLEEGVSKGDGATIFAYHVHDPERYGVVEFGGDMTAISIEEKPAKPKSHWAVTGLYFYDADVVDIAANLKPSARGEYEITDVNKTYLERGKLRVSMMGRGYAWLDTGTPESLLEAGGFVRTLEKRQGFKIACPEEIALAKGFITKEHFAQIAAKAGNGDYGQYLRGLLD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02545, Phi92_gp066, phage(gi726646999), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 5.91e-117
Locus 4: ELG61_02550 (Region 2)
Locus: ELG61_02550ORF Start: 494890
ORF Stop: 495783
Strand: Backward
Protein Sequence: MRIAVTGKSGQVTSALQALNMPGIEIIAIGRPELDLLEPSMVSEIIAKIKPEVVVSSAAYTAVDKAESDEAAAFAINRDGAKAIAAATAELSLPVIHLSTDYVFDGDKPECYVESDPVGPVSVYGRSKLEGEYAVAAANENHVILRTAWVYSTFGHNFVKTMLRLAETREELSVVGDQLGCPTSAGDIAGAIVKIAGRLSNDSSPDLRGVFHLAGSGETSWAGFARYILSIHQEKTGRRVTVKDIATADYPTAAKRPANSRLCCDKLKSLYSVSMPEWRISVRAAVTKLLEEPKEAV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02550, Phi92_gp064, phage(gi726646997), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 1.50e-42
Locus 5: ELG61_02555 (Region 2)
Locus: ELG61_02555ORF Start: 495785
ORF Stop: 496840
Strand: Backward
Protein Sequence: MRVLVTGGAGFIGSALVRYLVSDIGAEVLNIDKLTYAGNLASLKTIENAPNYRFLKADICDRSAVCNAFEEFRPDYVMHLAAESHVDRSITGAADFIETNVNGTFSVLEAARQYWERLPPHAKAAFKMLHVSTDEVYGSLGEDGFFAETTAYDPSSPYSASKAASDHLATAWERTYGLPVIISNCSNNYGPFHFPEKLIPLIILNALERKPLPVYGSGANIRDWLYVDDHARALWLIVQRGRPGEKYNVGGRNERRNIEVVERVCAIMDEVRPGTAPHSDLISYVADRPGHDARYAIDATKLETELGWRAQENFDSGIRKTVEWYLENAWWWQPLRERVYSGERLGVLKKV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02555, Phi92_gp067, phage(gi726647000), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 9.38e-117
Locus 6: ELG61_02560 (Region 2)
Locus: ELG61_02560ORF Start: 496854
ORF Stop: 497420
Strand: Backward
Protein Sequence: MYALKVEQLEIGDVKKVTPARFGDSRGYFSEVFKDFWFRTNVADVSFVQDNESLSAQPGTVRGLHFQLPPFAQGKLVRCLRGALLDVAVDIRHGSPTYGKWVSAELSPENGSQLWVPAGFAHGFVTLEPDTIISYKVTALYSAEHDCGVRWNDAEIGIEWPQMDGYVLSDKDNKQPLLSELPTYFQFS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02560, Phi92_gp065, phage(gi726646998), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 3.49e-43
Locus 7: ELG61_02565 (Region 2)
Locus: ELG61_02565ORF Start: 497667
ORF Stop: 498587
Strand: Backward
Protein Sequence: MNRDVKIYVAGHRGMVGSAIVRRLKAGGYTNIVTRSHAELDLVNQAAVTEFMKTERPDYIFMAAARVGGIHANNVYRAEFLYQNLMIETNVVHAAWQAGVERMLFLGSSCIYPRDCPQPIREEYLLTGPLEQTNEPYAIAKIAGVKLCESYNRQYGTRYVSGMPTNLYGPNDNYDLDSSHVMPALIRKVHEAKIRGDRQLVVWGSGRPMREFLYVDDMADACVFLMEKEVSEGLINIGTGEDITIRELAETIMRVVGFTGEIVYDQTKPDGTPRKLMSVDRLSALGWKATTSLGDGIARAYADFAS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02565, GDP-L-fucose synthase, phage(gi472340899), PHAGE_Synech_S_SKS1_NC_020851
Homolog/Ortholog E-Value: 1.53e-116
Locus 8: ELG61_02570 (Region 2)
Locus: ELG61_02570ORF Start: 498592
ORF Stop: 499674
Strand: Backward
Protein Sequence: MKRALITGITGQDGSYLAELLIEKGYEVHGIKRRTSLFNTDRIDHLYQDPHDTNRRLVLHYGDMTDSSSLVRIVQQVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRILGLEKKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYREAYGIYACNGILFNHESPVRGETFVTRKITRALARIKLGLQDCLYLGNLDAKRDWGHAKDYVEMQWLMLQQDEPEDFVIATGVQYSVREFVDAAAHEIGLPISWKGSGAEEKGYDENGRCIVAVDPRYFRPTEVETLLGDPSKAKEKLGWEPRITFKQLVEEMMREDLKSAERDELVKRHGFSAYDYHE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_02570, GDP-D-mannose 4,6-dehydratase, phage(gi472340900), PHAGE_Synech_S_SKS1_NC_020851
Homolog/Ortholog E-Value: 4.15e-179
Viewer Options
Click on a sequence to see details.
Locus 1: ELG61_15490 (Region 3)
Locus: ELG61_15490ORF Start: 3017620
ORF Stop: 3017907
Strand: Forward
Protein Sequence: MSNGPLTDAQLAELQALEKLSDEDIDTGDIPEITDEQWRLARKGNLYRPLKQSVTIRVDADILDWFKSHAGGRGYQTDINAALRTHIARHQKGSG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_15490, hypothetical protein, phage(gi117676336), PHAGE_Burkho_phi52237_NC_007145
Homolog/Ortholog E-Value: 1.51e-08
Locus 2: ELG61_15495 (Region 3)
Locus: ELG61_15495ORF Start: 3017923
ORF Stop: 3019623
Strand: Backward
Protein Sequence: MAPTIRSPIRRTLALMASAAILAQAGVSGIAYAQTAPETTAPGVTAPAPTPPAPAAPQQTAPIQAAVPNTGPASVADLAEGLLDAVVNISTSQKVKDDEGAGPAPRAPDGSPFQEFFNDFFNKQQGNKGGNHNVSSLGSGFVIDPAGYIVTNNHVIEGADDIEINFANGSKLKAKLIGTDTKTDLSVLKVEPKTPLKSVKFGDSSTMRIGDWVMAIGNPFGFGGSVTVGIISGRGRNINAGPYDNFIQTDAAINKGNSGGPLFNMKGEVIGINTAIISPSGGSIGIGFSVPSELASGVVDQLREYGETRRGWLGVRIQPVTDDIADSLGLDTAKGALVAGVIKGGPVDDGSIKAGDVILKFDGKTVSEMRDLPRVVAESTVGKEVDVVVLRDGKEQTVKVKLGRLEDSDQAAASGDSAPDGSQDDGVITPDPGENNDMDQPDTGDQAKPAPDTPDQHKGQVSPDAATPKNVLGLSLSLLSAETRKAFGIAESVDGVVVTEVTPGSASAEKGLKPGDVIVEVAQEFMKSPDAVAAKVQALKQEGRRNAQLMIASANGDLRFVAVPME
Homolog/Ortholog Species: Protease
Homolog/Ortholog Protein: ELG61_15495, serine protease, phage(gi24375430), PROPHAGE_Shewan_MR-1
Homolog/Ortholog E-Value: 1.47e-79
Locus 3: ELG61_15500 (Region 3)
Locus: ELG61_15500ORF Start: 3019825
ORF Stop: 3020790
Strand: Backward
Protein Sequence: MTSNRLPIIFIILAIVLVGLYSSIFVVNAREQAIVVRFGQIQSVKTEPGIYFKLPFGFMDADRVQLVEKQALRLDLDNIRVQVQDGQTFDVDAFVIYNIADVRRFRETVSGDREAAEARLRAQLDSSLRRVYGLRDYNAALSEERVAMMLEIRDDLRTDAENLGLHIDDVRIRRTDLSPEVAPNTYNAMRSERLAEAERIRAEGNEEGQRRRAIADRQVVEFTAGAQRDAEILRGQGDAERNRVFAEVFSKDPAFFEFYRSMAAYSSALSSQDTTLVLSPNSEFFRYFDNAAGTLQPTNPAAPVPGVPGAAAPAAPAQPAN
Homolog/Ortholog Species: Protease
Homolog/Ortholog Protein: ELG61_15500, FtsH protease regulator HflC, phage(gi15834405), PROPHAGE_Escher_Sakai
Homolog/Ortholog E-Value: 2.73e-45
Locus 4: ELG61_15505 (Region 3)
Locus: ELG61_15505ORF Start: 3020794
ORF Stop: 3021876
Strand: Backward
Protein Sequence: MPWSNQNGGGGPWGGGGGNNQGPWGQGPNRPRGGGGKGGPPDLEDIIRRGQDQLRNIIPGGFNGGVAVVVVAIVAVFWLIQCIYVVQPDERGVELRFGKPKDEISMPGLHFHFWPMETVETVKVTVQQLNIGATSASSSNGLMLSSDKSVINVQFAVFYTVSDPKAYLFNVENPAETLQQVSDSAMREIVGRRPAQDAFRSNRQPIEVDVLNILQDTMNRYGAGVTVTGVTIQNVAPPREVADAFEEVQRAGRDRDSTIEEANRYTNQKLGQARGDAARIREDAAAYKDRVVKEAEGEAQRFTAINDEYSKAPDVTRKRLYLETMEQVLKNSRKVIIDEKQGVLPYLPLNELGKPAQQGG
Homolog/Ortholog Species: Protease
Homolog/Ortholog Protein: ELG61_15505, FtsH protease regulator HflK, phage(gi15834404), PROPHAGE_Escher_Sakai
Homolog/Ortholog E-Value: 2.87e-55
Locus 5: ELG61_15510 (Region 3)
Locus: ELG61_15510ORF Start: 3022025
ORF Stop: 3022543
Strand: Backward
Protein Sequence: MADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGKPVVMGRKTYDSIGKPLPGRPNVVISRQAAIDHPDVSMAHSLPEAMTAADRLALETAVDEICIIGGGQVYAQAIGFANRMCITHVEVDLDGDASFPAIDPDIWQAGEAIAVPAGEKDSYPTRFIVYERRYA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_15510, putative dihydrofolate reductase, phage(gi448260875), PHAGE_Bacill_phiAGATE_NC_020081
Homolog/Ortholog E-Value: 6.85e-33
Locus 6: ELG61_15515 (Region 3)
Locus: ELG61_15515ORF Start: 3022557
ORF Stop: 3023351
Strand: Backward
Protein Sequence: MKQYLDLLNHVMEKGSDRGDRTGTGTRSVFGYQMRFDLEEGFPVLTTKKLHLRSIIHELLWFLKGETNIRYLKENGVSIWDEWADENGDLGPVYGAQWRSWPAPDGGHIDQIANLVKGIVNNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISSYALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIFGFTFDDFELIGYEADASIKAPIAV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_15515, putative thymidylate synthase, phage(gi148747783), PHAGE_Geobac_E2_NC_009552
Homolog/Ortholog E-Value: 2.99e-128
Locus 7: tRNA (Region 3)
Locus: tRNAORF Start: 3023491
ORF Stop: 3023831
Strand: Backward
Protein Sequence:
Homolog/Ortholog Species: Trna
Homolog/Ortholog Protein: tRNA
Homolog/Ortholog E-Value: N/A
Locus 8: ELG61_15525 (Region 3)
Locus: ELG61_15525ORF Start: 3023953
ORF Stop: 3024468
Strand: Forward
Protein Sequence: MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKYPEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPLADGEELPSGEITAYPVDAGGKPDDAAGAKPADGEEKKPGSVVSLDSFRKKQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_15525, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: ELG61_15530 (Region 3)
Locus: ELG61_15530ORF Start: 3024518
ORF Stop: 3024712
Strand: Forward
Protein Sequence: MSAEIINLRQFRKKQARSEKEKQAEQNRISFGRTKTEKQLTRSLNEKADKAHRDGRIEADDDGA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: ELG61_15530, DUF4169 family protein
Homolog/Ortholog E-Value: N/A
Locus 10: ELG61_15535 (Region 3)
Locus: ELG61_15535ORF Start: 3024870
ORF Stop: 3025094
Strand: Forward
Protein Sequence: MIRKHSATLHGHRTSFSLEDEFWAELKTIAGARSIPLAAMISEIDDHRPPDSNLSSALRLHVLSWLKAGGDRKP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: ELG61_15535, aryl-sulfate sulfotransferase
Homolog/Ortholog E-Value: N/A
Locus 11: ELG61_15540 (Region 3)
Locus: ELG61_15540ORF Start: 3025202
ORF Stop: 3028918
Strand: Backward
Protein Sequence: MVGRFLVFLGGVIVVVLFVALLAPLFIDWTDFRKNFEDQASRIIGKKVTVYGTVDARLLPFPSVTLHDVRVGQEADGTPIVKVEQFSMDAELAPFLSGEALIFDMRVVNPKVRLRLLKDGTLDWMRGSRAEIPARTVVLENVHVSGGEVEFIDDQSGRSRRITGLNAEMSAKSLAGPWRIEGDAALDGEHGGFSISSSQPDEKGVLRMRTRLSPDKHPVSVDLDGELKLVDSKPNYQGQLSAAVEIRNSAKPANKKEQPPRVKGRFELTNERIRIPEYRMEIGPTDDPYVITGEATLDTGNAPEFLLTADGQQIDVNRIGNQGSAGKTTRDPAVSARQRLNSLIDIVAQVPIPQVPGKASVKLPAIVAGDTTLRDVQLELEPAGTGWMIDSAIGTLPGRTQVEGKGKLLLQGEPSFNGQIVVASSQPTGLASWLAGSVDPAIRQLRQAGFSANVSLTHELQRFENLEIAIGPATLKGRLERQAISGQTPTLSVALNGDTLDLDALQALSGLMTGQDAGDNVLDHKIAAQLKADKFTAFGVSAENVETTFTIADGALAVDRLSIKNIAGAELTATGRAEGSLLDYKGAGEITFKSADPGGFFTMLREHLPHHPVLDRLVRNAGWYGNTALRGALTLGGDEGNALTVTLAGVANGSRVNLDYRMSDLLALTGNGTTSLEATLENAVPSVLFGQAGLDPLPVDVGANGRLTLKVKASGNDPADAALTFATDRTSFMANGKVDVRPETFMNGQIALSLDSADIDPYLIMNGIALPQTGTGLPFGLQVNAAVDSDKIVFSDLKGHAADNEFSGALSFDRKAAKTTASGGLTLSKVDAGWLGEAVFGQIVDPANGQLTTAALGLPIFKDLDVNVKLAAKEFWLGLPETAVSDFTSNVAYKGDELQLNDMAGNWDGGKLSGNLLFTNASGTGFLQTKLALADSDLSGVVWLRDGAPIANGKFGLSLSMEASGKTIGEIASSLNGSGELRLGDTSIRGLNLAILPPLLAATDTMQEQINAGKVHPIIETLLSNGEAKLPPLGIPFNIADGTLRVQNVTVANDLARITADAQIALPEERISATLGVGFNPGTEALSGAEPALRLNFSGMLLSPGKTMDVTDITSYLSLRAFERERRRVERLQAVVLEKQRLRREVALYRFNDAERMKAAEIEQQRQAEEERLRALAQKAAAEKAAAEAEAARAAEAKAKADADAQARAAAEAEAARRSGQAQPGPLNFDQVPGVQAQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_15540, 1_NC_021802: hypothetical protein, phage(gi526178114), PHAGE_Cellul_phi10
Homolog/Ortholog E-Value: 7.37e-06
Viewer Options
Click on a sequence to see details.
Locus 1: ELG61_20590 (Region 4)
Locus: ELG61_20590ORF Start: 4100121
ORF Stop: 4100831
Strand: Forward
Protein Sequence: MKTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLSVPHHIIDIAGIGGHLSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKADAVAVAVHGGDHFIYPDCRPGFIEAFQRMQNEALEGYASVKLLAPYVDVSKAAIVVDGEKHGTPFSETWSCYKGGEPHCGRCGTCVERREAFHLAGVPDPTAYEDQDFWKAAISRYSATEVR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20590, gp3, phage(gi29566196), PHAGE_Mycoba_Rosebush_NC_004684
Homolog/Ortholog E-Value: 1.02e-48
Locus 2: ELG61_20595 (Region 4)
Locus: ELG61_20595ORF Start: 4100831
ORF Stop: 4101187
Strand: Forward
Protein Sequence: MYRITKEFHLSASHQLDHLPADHQCARLHGHNYVVIVELAAENLNDDGFVRDYHDLSPLKRYIDETFDHRHLNDVFGHSKVTSEFLARHFYDWCKQRFPETSSVRVSETPKTWAEYRP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20595, 6-pyruvoyl tetrahydrobiopterin synthase, phage(gi422935983), PHAGE_Bacill_BCD7_NC_019515
Homolog/Ortholog E-Value: 4.50e-06
Locus 3: ELG61_20600 (Region 4)
Locus: ELG61_20600ORF Start: 4101184
ORF Stop: 4101927
Strand: Forward
Protein Sequence: MSVGTIRVSEIFGPTIQGEGALIGLPTVFVRTGGCDYRCSWCDSLHAVESAFRDQWIPMSTEAVWHKVTELSGGKPLTVSLSGGNPAIQPLRPLIELGHSQGYRFALETQGSVAQAWFRDLDTLVISPKPPSSGMLTDWDQVDNCLQLAAGGPEVALKIVVFDDADYEFAQRAGQRYPQIPLFLQPGNHTPPPPDDPDDDDDNARIDIDGVMDRMHWLVERVTADQWFEVRVLPQLHVLLWGNKRGV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_20600, hypothetical protein, phage(gi100006), PHAGE_Mycoba_Bipper_NC_031253
Homolog/Ortholog E-Value: 1.29e-13
Locus 4: ELG61_20605 (Region 4)
Locus: ELG61_20605ORF Start: 4101946
ORF Stop: 4103169
Strand: Backward
Protein Sequence: MQSFSNKADIAEEGVWPIRRRRILDWLVNDTRGERFIDNILVEMCEKLLAAGVPVARVTLHFRTNHPQWIGARILWKEGLAEAKINTFAYGVENTPEFLKSPVNAIHQGSEEVRRQLEGTADGDEDSFYQELRDDGLTEYIAWPLEHTFGKRHVVTFSTSRPGGFTSEHVDFLRDLLPALTLVSEIRLKNIMARTLLQTYVGPHASEQILSGVTTRGSGATVGAAIMICDLRDFTAISDLWPRDDVIHLLNDYFDAMSDPIERHGGEILKFMGDGLLAIFPLAKETACLDLLQAIREGQALMAQLNQQYAGNGREPLRYGVGVHVGDVMYGNIGSRRRLDFTVIGPAVNVASRLETLTKEVKRPVLLSRAFVEMAGCAKDMDSLGTFPLRGLGEPVDVFAFPERVAA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20605, adenylate/guanylyl cyclase, phage(gi460042455), PHAGE_Pelagi_HTVC008M_NC_020484
Homolog/Ortholog E-Value: 1.10e-16
Locus 5: ELG61_20610 (Region 4)
Locus: ELG61_20610ORF Start: 4103274
ORF Stop: 4104248
Strand: Backward
Protein Sequence: MNMQLKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGSIRLMEDAATPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSEENEFLQRKSALIMEQYRSGDPLKKKVASVFLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKYTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDEDWDF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20610, NrdG, phage(gi508177953), PHAGE_Mycoba_PegLeg_NC_021299
Homolog/Ortholog E-Value: 4.63e-179
Locus 6: ELG61_20615 (Region 4)
Locus: ELG61_20615ORF Start: 4104484
ORF Stop: 4106688
Strand: Backward
Protein Sequence: MDTGTPLTRDSGAKPHNTLAHPAGERPLKAAETLDYHALNAMLNLYDDQGRIQLDKDRMAAKQYFLQHVNQNTVFFHNLREKLDYLVTEGYYEQEVLDQYSFNFVRDLFDQAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRICMVALALARGDEALARDMVEEIISGRFQPATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKHIENQSSGIIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIMRFLDTKRENADEKIRIKTLSLGVVVPDITFELAKNNEDMYLFSPYDVERVYGVPFTEISVTEKYREMADDARISKKKIKAREFFLVLAEIQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEASEYHDDLSYKHLGKDISCNLGSLNIAAAMDSADFGKTIETSIRALTAVSDMSHISSVPSIEKGNDESHAIGLGQMNLHGYLARERIFYGSEEGVDFTNIYFYTVTYHAIRASNLLAVERGTSFKGFENSKYASGEYFDKYTDRLWEPATEKVKALFETADIHIPTQEDWAALKKLVMASGLYNQNLQAVPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPAPFMTNDNLDYYQDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQIHAWKKGIKTIYYIRLRQMALSGTEVQGCVSCTL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20615, ribonucleotide-diphosphate reductase subunit alpha, phage(gi589890883), PHAGE_Lactoc_phiL47_NC_023574
Homolog/Ortholog E-Value: 0.0
Locus 7: ELG61_20620 (Region 4)
Locus: ELG61_20620ORF Start: 4106667
ORF Stop: 4107074
Strand: Backward
Protein Sequence: MGLIVYYSSRSENTHRFVAKLGLRAARIPPSGAAGAFHIREPFVLIVPTYSGDGGKGAVPKQVIRFLNDAENRGHIRGVIAAGNSNFGETYGLAGDVVSQKCQVPYLYRFELLGTEADVANVKHGMERFWTREHL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELG61_20620, hypothetical protein, phage(gi100023), PHAGE_Bacill_SPG24_NC_030903
Homolog/Ortholog E-Value: 5.33e-17
Locus 8: ELG61_20625 (Region 4)
Locus: ELG61_20625ORF Start: 4107089
ORF Stop: 4107310
Strand: Backward
Protein Sequence: MTITVYSKPACVQCTATYRALDRLGVDYDIVDISQDAEALDRVRSLGYMQAPVVIAGEQHWAGFRPDMISALS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELG61_20625, glutaredoxin-like protein NrdH, phage(gi589892251), PHAGE_Mycoba_Adler_NC_023591
Homolog/Ortholog E-Value: 9.72e-25
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download