Submission Results
Sequence Name: Not Available
GenBank Accession Number: SIOT01000001.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: SIOT01000001.1.PHASTER.zip
gi|00000000|ref|SIOT01000001.1| Rhizobium leguminosarum strain SM138A chrom_SM138A, whole genome 4852724, gc%: 60.95%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 16.6Kb | incomplete | 60 | 17 | 822192-838845 info_outline | PHAGE_Myxoco_Mx8_NC_003085(6) | 63.20% | Show info_outline |
| 2 | 10.4Kb | incomplete | 30 | 11 | 2942549-2953000 info_outline | PHAGE_Synech_S_CRM01_NC_015569(1) | 58.51% | Show info_outline |
Region DNA
>1 822192-838845 ATGGACCCTTCGATTGCTCCGGCCTCGCGGGCCGCAGTGGTAACGCCGAACGATACCGCC ATTGTCGGTGCGCGCGCGCTTTATATCGGCACGGCGGGCGATGTGGCCATTGCGCCGCGT CGGGACATGGATCCTGTGATCTTCAAGAGCGTGCCGGCCGGGACGATCCTGCCGGTTCAC GCCGCCATCGTGGCGCTGACCGGGACCACGGCATCCAACATCGTCGCGCTGTTCTAGACG CTCCAGAAGCGGCGCCTCATGGGCAGACCCATCAAGTTCACCCAGGCGATTGCCGACAGG ATTTGCGAGCGCATTGCTGACAGGGAAAGCCTCCGGTCGATCTGTCGGGATGAAGAGATG CCGTCCATGTCGAGCGTGCTGTCCTGGCTCGCCGATGACGAGAAGGCCGCGTTTCGGGTC AAATACGCCCTGGCGCGCGAGATCCAGGCGGACGGCTTTGTCGATGAGATGGTCGAGATT GCCGATGACCGTGCGGACGACTGGATCGAAAAGAAGAATGCGAGCGGCGAGACCACGGGC TGGCAGGAGAATGGCGAGGCCATCCGGCGCTCGCAGCTCCGCATCGCCACCCGGCAGTGG GTCGCCGAGAAGCTGAAGCCGAAGAAATACGGTTCCAAGGTCGAGCCCGACCATGGCGCG GTGACCGGCGGGGTTTCGCAGTTGCTGGAAGATATCAATGGCAAGACGCGCGGACTTCCA AACGGCAATTGACCAGTTTTCCGACTGGCGCTGGCGTCTGAACAATCTCTATTGGATCAC CGACAAATCGGGCAAACGCGTCAGGTTCGAGATGAACTGGACGCAGATGACGTTTTTCGA GCAGATGCATTATCTGAATGTGCTGCTGAAGGCCCGCCAGCTGGGTCTCACGACCTTCAT TCAGATCTTCATGCTCGATGCCTGCGTCTTCAACAGGGATATCCGCGCCGGTACCATCGC CCATACGCTGGGCGACGTGCAGACGATCTTCCGGGACAAGATCAAATACCCCTATGACAA TCTGCCTGATGGTATCCGCAACGCCGTGCCTGTTGTCAGGGCCAACCAGACCGAACTGCT GCTTGGCAATAATTCGAGCATTCGTGTCGGCACCTCGCTGCGCTCGGGAACGCTGCAATA TCTTCATATCTCCGAATATGGAAAGCTTTGCGCGAAATATCCTGACAAGGCGAGGGAAGT CCGCACCGGCGCTTTGAATACGGTGCAGGCCGGCCAGCTGGTCTTCGTCGAAAGCACTGC GGAGGGCCAGGAAGGGCATTTCTACACGCTCTGCGAAGATGGCCAAGTCAAGCAGCGCCA GGCGGCGAAACTGACCGAACTGGACTTCAAGTTCCATTTCTTCCCGTGGTGGAAGGAGCA GCAATATGCGATCGCGCCTGAGGGCGTCATCATCACCGATGCTTTCGCAAAGTATTTCCG CAATCTGGCCGATCAGGGCATCACGCTGACGGACGGGCAGAAGGCCTGGTACGTCAAGAA GGCCGAAACCCAGCTCGGCGACATGAAGCGCGAATATCCCTCGACGCCGGCCGAAGCTTT CGAGGCGAGCGTCGAGGGCGCCTATTACGCCGACCAGATGGCGGTCGCCGACGCTGAAGA GCGCATCGGCGTCTTCCCGCATGTCGAAGGTTATCCCGTCCATACCATTTCAGACATCGG CATGGACGATACCAACAGCGTCTGGCTGTTTCAGGTGCTGCCCGGCCGTGTGCGGATGAT CGGCTATTTCGAGCACACCGGCACCGGCATGGACGGCATGCTCGACGAGCTGGAGCGGCG TAGCGCCGAGCATGGCTATGTCTACGGCGTCCACAACATGCCGCACGACATCAAGGTCAG GGAATGGACGCGCGGCGGCATGACCCGCATCGAAGTCATGCTGAGAGAGGTCAAAGCCCG CGGCCTTGGCACCGTCCGCAAGATCGAGCGCGCCTATGTCCATGACCGGATCAACGGCAC CAGGCGCATTCTGGCGAAGATCGAGTTCGACCAGGCCGGCTGCATCCAGGGCATCAAGTG CCTGAGGAACTACCGCAAGGACTGGGACGAGGATTTGAGCGTCTTCCGCGACGAACCCCT GCACAACTGGGCCTCGCACGGTGCCGACGCTTTCGGGGGCCTGGCGATCATCTTCACCGG CTTGGCGCCCGAACCGCTGAAGCCGCAGGTGAAGAGCCTCCCGACCTTCCAGACGATGAC CTTCAACGAATTTGCCGATTCCACCCCTGCATATAGCGAGCGTGTTTGATGGAAGACGAA ACAACGGCTTTGGCGGACGGGCAGCAATGGGACCTGGCAAAGGTCGGCGCCCGTTGGCAG CAGGAGCTCGAGCGCGCGCAGCGTTATTTCAGATCCTGGCATGACCGCTGCGTCAAGATC GAGAAGATCTATCTCGACCAGCAGTCGGACCAGACGAATGCGGCCAAGCGAAGGTTTCCG ATGCTCTGGGCTAACACCTCGGTGCTGCAGCCGGCCGTCTATGCCCGGGTGCCGCAGCCG GTCGTCGAGCGCCGCTTCAAGGACGCCCAGCCGGTGGCGCGCATGGCCTCCGAGCTCGTC GAGCGCAACCTGTCCTATATGGGCGACGAAGCCGATATCGATTCCATCATGCGCGCGGTG CGCGACGATTTCCTGCTCTGCGCCCGCGGCACGGTATGGCTACGCTACGAGGCCGATTTC GAGCCGCTCGACATGGGCGTTCAGCCTTCCGACGCGCCTGCGAATAGGGGCTTGCCCGAA GGTCTCCTTGGCGGGATGGGCGAGGATGGCGGAGCGCCGCCGGAGGCGATCAGCGACGAA CGTGTCTGCATCGATTATGTGCACTGGTCGGATTTCCTGCATTCTCCGGCCCGGCGCTGG AAGGATGTGACATGGGTGGCGCGCCGCGTTCCGATGACCGACGAGGAGATGCAGAAGCGG TTCGGCCCGGACGCGATGACATCTCTCCAGGCGCAGGGTGCCGGCAGCAACAAGGGCAGC AACCAGACGGAGCGCGCCGAGAACGAGGGCAAGACCCATGTCTGGGAGATCTGGTGCAAG AGCGAGAACTATACGGTGTGGATCGCCGACGGCGCGCCGGTGGCGCTCGAAGTGTCGGAG CCGCCGCTGGATCTGACACACTTCTGGCCTTGCCCGCGCCCGGCCTATGGCACGATGTCG ACGAGCTCGCTGATCCCGGTTCCCGACTATGTCTATTATCAGCAGCAATGCGACGAGATC GATCTCCTGACGAAGCGCGTCAACAAGCTGACCGATCAGCTGCGGCTGAAAGTGTTCTAC CCCTCCGGCGATGGCGCGATCTCGCCGGCGATCGAGAAGGCGATGCGGCCGGAAAACGAC ACGGTGATGGTGCCGATCCCGGAATGGGCTGCCTTCACCGACAAGGGCGGCTCGAAAGCC ATCGTGACGCTGCCGATCGACGAGGTGCAGAAGGTCATCATCGCCTGCATCCAGGCCCGC AAGCAGCTGATCGAGGACGTCTACCAGATCACCGGCATCTCCGACATCGTCCGCGGCGAT ACCCAGGCGTCGGAGACGGCAACGGCGCAGCGCATCAAGAGCCAGTGGGGCTCGATCCGC ATCCGCGACCGCCAGTCCGAGCTTGCCCGCTTCGCCCGCGATATCATCCGCCTTGCCGGC GAAATCATCTGCGACCAGTTTCAGCCGGAAACGCTGATGCTGGTGAGCGGCATCAAGCTG CCGACCATGGCTGAAAAGCAGCAGGTCCAAATGCAGATGCAGATGGCGGCACAGCAGGCC GCGGCGCGCGCCGAGCAGCTGGGACAGCCCGCACCGCCGCCACCCGAGATGCCGCCGCAG CTCCAACAAATGATGCAGCAGCCGACGATCGACGAGGTCGTGCAGCTCTTGCGCAACGAC AGCATTCGCGGCTTCCAGATCGACATTGAAACGGATTCGACGATCGAGCCCGACGAGGAC GCCGAAAAGCAGCGCCGCATGGAATTCGTGCAGATGATCGGCGGCTTCCTGCAGCAGGCC GGCGCCATGGCGCAGCAGAACCCGATGCTGGTGCCTGTCATGGTCGAGACGCTGCTCTTT GCCGCCCGCGGCTTCAGGGCCGGCCGCCAGCTCGAAAGCACGCTGGAGCAGGTCGGCGCC CAGCTCTCCGAGGCCGCCACTGCGCCAAAACCACCGCCGGAGCCGCCGGCCGAGCAGATG ATCAAGCTGAAAACGGCTCAGGTGAAGGCGGGTGCGGAACAGCGGAAAGCCGAGCTTGGT GTGGCGCAAGCCGAGATCGAGCATCGCGCCGTGGTGGAACAGGCACGCGGCGAGGCGGCG GCGCAGGCCTTGCAGCAGCTGCAGGCGCAACAGCCTGCCTATCAGTGAACGGAGTGAAAG CATGAGAGAACGCTATTGCCGCGTCTGCGGCGGCTGGCACCAGCTCGACAAATGGCCGCA CAACTGCATGCCGGTAAAGAGCCAGGCGCAGTCCGATCTGCCAGCGCCGCATTTCGTCAG CGACAGCATCGATATCCAGTCGATGCATGACGGCAGGCATTACACCTCGAAAGCCAAGCT GCGCTCCGCCTACCGGGCAGCCGGCGTGGTCGAGATCGGCAACGAAAAGCCGCAGCCGAT CGAAAAGCCGAAGACGGATCGAAAGGCGATCCGCAAGGAGCTGCGGCGAGTTCACGCCGA ATACAACGCTTAGAGCCCAGGAAAGGCTCTAAACTTTTGTTTTTACGCAATTCCGGACGG AAAACCGCTTCGCACTTTTCCTGGAATTGCTCTAACGGGCATCAACCCCCGACAAAGGAA GTTTCCGACATGGACATGGAAGACCTGAACGAGGCCGGCAACGGCAGCGAAGATTTTGGC GCGTTCGACGACAAGCCCCTGAATGACAGGCCAGTCAGCATCCGCGACAGCCTGAAGGCA GCGATCGACACCGTCGAAGGCAATGGACCGGGCGATATTACCGGCCAGCCGCGCGACGGG GAAAACGGCCGCTTCCTGGCCAAGGGGCAGGAGCAGGCCGCCACAGCGGCGAGGGCAGGG CAGGCGCCCGCGGCAAACGCCGCTCAGCAGACGCCCCAAGCACAGACCCAGATGCAGACC CGGGAACAGCCGGCAGGCATCGGCAGCCGGGTTCCGCCCGGCTGGTCGACGGAAGCCAAG GCGCAATTTGCAAGCCTTCCCGGAGAAGTGCAGGCGGCCATCACCAAGCGGGAACAGGAG GTCGATAACGGCTTCCGCGTTCTCCAGGATTACAAGGGGCTCGAGGAGTTCACGCCGCTC ATCCGCCAGGCCGGCATGACCCATGCCGATGTCATGCGCCGGGCGATCGACTGGGAAAAG GCGCTCATCCACGATCCCGTCAACACCGTCGTTCACGTCGCCAGGATGGCAGGCGTCAAT CTTCATGCCCTGGTCAATGGCCAGACGGATCAGGTCCTGCAGCGGAGTTCGCAGCAGGCC GGACCACAGCCCGGACTACAGCAAGGAGGACCGCAGCCTCGACACGTCAACGTCGAGGCG ACGGTCGAACATGTTTTGCGGAAAAGGGACACCGAAACTCAAGTCGATGCCTTCCTTTCC GACCCGGCAAACGCGCACGCCGATGATGTGCTTGATGACATGATCGCCCTTATCAATGCA GGGCGGGCAACGTCACTCCAGGACGCCTACGACGCCGCATGCTGGATGCGCCCGGACATT CGCCAGCAGTTGATCAACCAGACTGCGCAGGCGCCCGTCCGAGAACAGCAAGCCCAGAGG GCAGCAGCGGCAGATCAAGCCCGCCGCGCCTCGCGATCCATCTCTGGATCTTCCGCGCCG GGGCCGACCCGCGATGCGGCAAGAGGCCAGCCCACCTCAATCCGAGACTCGCTGCGCGAC GCCATGCGTTTTTCGCGCGGTCAAGTCTGATCAAAGGAATGATCAATGCCCATTTCGCCC AACCTTTCTGAAATCGTGACCACGACGCTGCGCAACCGCAGCGGCACGGTCGCCGACGAC GTGACGAAGAACAATGGTCTTCTCACCCGTCTGAACAGCCGCGGCCGCAAGAAGCCCATC TCCGGCGGCCGCACCATCGTGCAGGAACTGCAATATCAAGAAAATGGCAGCTTCAAGCGC TATTCCGGCTACGATATCCTGAACGTCCAGCCCTCCGACGTCATCACCGCTGCCGAATAC GACCTCAAGCAGGCGGCGGTGGCCGTCTCGATGTCGGGCCTCGAACAGCTGCAGAATTCC GGCGAGGATGCGATCCTCGATCTGCTTGAGCAGCGCATCGAAAACGCCGAAACGACGCTG AAGAACAACATCGCGCTCGACTGCTATTCCGATGGCACGGCCGATGGCGGGCGTCAGATC GGCGGCCTGCAGCTACTGGTCTCGACCTCGCCGACATCAGGCACCGTCGGCGGCATCTCG CGCGCTACCTGGGGTTTCTGGCGCAACCAGAAATTCTCGGCCTCGGCCGATGGCGGTGCC GCCGCCTCGAATGCCAACATCCAGAGCTACATGAACCGGCTCTATATGTCCTGCGTTCGC GGCTCCGACGCGCCCGATCTTGTCGTCGCCGACAACAACTTCTTCCGCCTCTACTGGGAA TCGCTGCAGGCGATCCAGCGCATCACCTCGGCGGACAAGGGCATGGCCGGCTTCCAGTCG CTGCAATACATGGGCGCCGACGTGATCTTCGACGGCGGCTTCGGCGGCGGTGCGCCTCTC AACCAGATGTTCTTCCTGAACACCAAGTACCTGTTCTATCGCCCGCACCGCGACCGCGAC ATGGCCCCGATCGGCGACGAGCGCATGAACACCAACCAGGATGCCTTCGTGCAACTGATG GGCTTTGCCGGCAACCTCACCATGAACAACGCCTTCCTGCAGGGCGTGTTGTTCGCCTGA TCGTCAACGAAAGGAAAAGCAAATGTCGGTCGCAACAATCCAGTCCGATCGTCTTGGCGC GAACCCGTTCGTCGTCGAAGGCCCGATCGTTTCCGGCTCCGGTATTCCGGGCCCGAACTT CTCCCTCGGCGCTGTCGCCGGCGGGGACCGCGAATCCGAATGGGTCTATTGCCAGCTGGT GCTGGCCTCGCAGACGACCCTTCAGCCCGGCCAGTGGTTCCAGTGGACCCGGGATTATGT CGCCTCGCTGCTAACCACGGCGGCTGCCGTCGTCGGCCAGCGCTGCGGCGTCTTCTCCGG TGCCGCCCAGCCGCCGACGCTGACCGGCGGCCCGGTCGGTGCTATCACGCTTGCACCCGG CACCTATTATGTCTGGCTGCAGCGCAATGGCCAGGCGCCGGCATTGGTTGCAACCGCAAC GGCGGCCCTTGTCGTTGCCGAAACCACGACCACGGCAGGCCAGGCGAGCGCCCCGGCATC CGCCACGGCAACCACCAAGGCCATCGCCAACGTCAACTTTGCGGCGGCCAACCAGACGTT CACGGCAACCACCGTCAACGGCTCCAACCTGCTGACGAGCCTTTCCGGGCTGAATGCCGG TTCCGGCCCGTTCATCGGCGCGGCCGTTTCCGGCACCGGCATATCAGGCGGAAGCACCAT CTCGGGCATCACCTACAACCCGAACGGCGTCATCCAGAGCATCACCCTCTCGGCCAACGC CACCGCCAACGGCACCGGCATCACCATCACCGCGACGGGTGTGCTCGAGGCAACGCTGAT GCGTCCGTTCCTGTCGAAGGTGAACTAACATCGACGGGCGCTTCGGCGCCCGTTTCGGCA ACCTCTCTATGCGTGACTGCCCCTCATCCAGTTCGTGCCGATGGCTGCCCCTCACCCTAA CGCTACCCGGGTCGAGCCACTCGTCTCGACCCGTCCTCCGGACCCCCGTAAAAACGGGGA GAGGGGACGTGCCAAACGCAACGTCGAGATTGACGAAGCCGGCGCGGCATATCCCCTTCT CCCCGCCTGCGGGGAGAAGGTGGCGGCAGCCGGATGAGGGGCAGTCGGCGATCTCATGCG TCGAGAACGACGCCGAGTATCGTTTGTGAACAATCACGCCCGAGGCGCTTCGACGCCCGC TTCCTTTCCCCCGCCATCAACAGCGAGACAAACACAATGTCCGACAGCAACACCGGAATT TATGCCTCCTTCAGCCTCGAACCGGTCGAGCAGACCTTTTTGACGGAGAAGGAAGGTCGG CCGATTTTCGCCGACAAGGAATTCGTCCGCATCTTCATCTCCGGCGACAAGCACACCGAA GTCTATCGCGAGGTGACCGACAACGACAAACAGCGCTTTTCCCAAGCCTATAAGCGCTTC AAGGAAGGCGCCGCCGCCCGCGAGCAGCTGACCGGCACGCCCCTGGCGCAATGGCCCTAT CTGAAACCCAGCCAGATCAAGGAGCTGGAGGCGGTCAACATCTACACCGTCGAGCAGCTC GCAGCCCTCTCCGACACCGTCAAGCAGAAGATCGGCATGGGAGCGAACGAGCTCGTCGCT GCCGCCCGGGCCTATCTGGCAACCGCTGAGAACTCGAGTGCCGCCTCGGCCTTTGCCGCC GAAAACGAACGGCTGAAGGACGAGGTGACGCGCCTGCAGGAGCAGATGAGGGAGATGGCC TCGCGCTTCGAGGCGCTCGAAAACGAATGCCAAGCCGGCGCCAAGTCCCGCGGCCGCGTC GCTGCTTGAACCGGAGATCCCGCGCATGTCGCTCTTGACTATCATTCAGAATGTCTGCGC GGAAATCGACCTCGATCCGCCGACGGCCGTCATGTCCTCGGCGGATCCGCAGATCATGCA GCTGCGCATCCTTTCCACCCGCGCCGGGCGCGACCTGATGCGTGAGCACGACTGGTCGGC GCTGATGGTGCAGCGGCAATTCGTAACGACCGGCGCCAACCCCGAGCCGGCCGAGCCGCC CGCCGACTGGGACCGTTTCGCCGCCAATTCGAAGATCTGGAACGCCTCGCGCCTCTGGCA GCTCAATGGCCCGGTGGAGCCGCAGACGTGGCAGCGCAATATCATCCTCAATTCGAACCC GGTGCCGCAGATCTGGCGCATGGCCGGCGGCAAGCTTGACATCCACCCGAATGCTGCAGG CGAGACGATGGCTTACGAGTATATTTCCAGCTTCTGGGTGGCGCTGAACGGCGAGGCAAC CTATGCCGCCAATTGGGCTGGCGACACCGACACCGCCCGTTTCCCCGAAGACCTCCTCGA ACTTTCGCTGATCTGGCGCTGGAAGCGAGCCAAGGGCCTCGACTATGGCGAGGAGATCGC CAGTTTCGAGCGATCCAAGGAAGCCGCGATCGGCGCCGATCGGGCGGCAAGCCCGGTTGA CCTCTCGCTGCCGGCGAGGGGGCAGGCGTCCGAGAATTATTGGCCCGGCACGATCACGGT GTCCAACCCATGACCCGCAGACCTGTCCCTCAAAACGCGCGCACCGGCCGCGTTTCTCCC AGCAAAGACTGGATCGCGCCGATCGGCGGCTGGCGCACCGATGTCGAGATGGCGGATATG CCCGCTGATGCGGCCTTTCAGCTCGACAACTTCTTTCCCGAGGCAAACCGGGTGCGCGCC CGCTATGGCTTCCTCGCCTTCGCCACCGGGCTTGGCGCCGACGTGCAGACGGTCATTCCC TATTCCGGCGTCGGCAACAGGCTGTTTGCCGCCGCCGGCGACAAGATCTTCGACGTGACG GCGGGCGGCGCTGTCGGTGCTCCCGTCGTCTCCGGCATGGCAAGCGCCCATTGGTCGGTG CAGCAATATACCAACCCGGCCGGCCAGGAGTTTCTGCGCCTCGTCAACGGCCTCGACACG CCGCTGCTCTTCAACGGCACCGCCTGGACGAATAATTTTCTGGTCGGCACGGCCGCACTC GCCACCCAGAACGTTGCCGTCAGGAACACGCCCTATACGCTGAGTTTCTTCGGCACCGGC TCCGTGACGCTTTCCGGCGCCTTCGCCGGCACGCTGAACGGAACGGGCGTCGCCAACCGG GTGTCGCTGACCTTCACGCCGGCGGCCGGCACGCTTGTCGTCACCGTCTCGGGAACGGTC ACCAATGCGCAGCTTGAAAAGGGCGCGGTCGCAACACCTTACGTTCCCTCGACGATGATA TCGGGCATTCCGGACGCATCGCTGCTGATCGCCGTCACCGCCTATCGCTCGCGTCTGTGG TTCATCGAGAAGAATTCGACCAATGTCTGGTATCTCGCCACCGACGCCGTCAGCGGCACG GCGACGGTGCTGCCGGTCGGCGGCAACATGAAATATGGCGGCACGCTGATTGCGATCAAC GTCTGGACCATCCCGGTTTCGACGGGATTGCAGCAGTGCCTGGTGCTGATCTCCTCGGAA GGCGAGGTGATCGTTTTCCAGGGGTCCGATCCCTCGAGCGTTTCCAATTGGGGCCTGATC GGCACCTTCAAGCTCGGCCGGCCGCTCGGCACCGATCGATGCCTGCTGTCGGTCGGCGCC GATCTGGCGATCATGACGACGGATGGCATCGTGCCGATCACCAAGGCCGTGCAGCTCGAT CGGGGTGCGACCAGTCTGGGGCGATCACCGCCAAGATCGGCCCGACCTGGCGCGAGACCG TGGCGGCCACCGGCACGACCTCTGAGGAGTGGCAGCTTTCGAGCTTCCCGGCCAGGCAAA TGGCGATCGTCAACCTGCCGTCCTCCTTCGGTCCCTATCAATATGTGATGAACACCGAAA CTGGGGCCTGGTGCCGCTTCGTCGGCATGCCGGCCTCCTGCTGGGCGACCTGGCAGGACC GGCTGTTCTTCGGCGCGGGCGACGGCACGGTTTATGAGGCCGAAGTCGGCGCCAACGACA ATGGCGTGGCGATCGACGCGCTGATGGTCGGCGCCTGGAGCCGCTATGGCGACGGGCTCT CGACCAAGCTCTCGAAGCTGATCGGGGTGACGGCGCAGATCGGGGTGTCGACGCTGATGT ATGCCGGGATCTCGGTGGACTACCAGACCAAGATCCCGACAGCCCTTCTGTCGTCGGTCG AAAACAATGCTGCGGCGAAGTGGGGAACGGCGGTTTGGGGTGTCGCGAAATTCCCCGGCA TTTCGCTCGTCCGCAAATTCGCCTCCGCCGGCGGCGCCGGTTCGGCCCTGGCGCCGACGA TCCGGGCGCTGATCTCGGGCTCGGCCGGCTCCGTCTCCGAGGCCGCCGTAGTCGGCGGCT CCGTGCTTTACGAAAAGGGCGCGCCGATTTGATCGTCTCCGAACCGCGCGAGCAGATCGC GGCCTGGGTCGGCAACAGGATCGGCGTGAGCTTCCACCCGCCCTACACCACGCTCGCCCA TATCGACCGCGGCCGGATCATCGCCGGCTTCGTCTTCAACGTCTGGACCGAGCATGACGT CGAGGTCTCGCTGGCCGCGGACCGGCTGACGCTGACGCTGATGCGATCGGTCTTTCGCTA TGTCGTGCATCAGCTCGGCTGCCGCCGCGCAACCGCAAGAACCCGCGCCGACAATGCCGA ATCCCAGAAGGTTCTGGCAAGACTGGGCGCCTGTCTGGAAGGCCGCCAGCAAGCCTATTT CGGCGACTGCGACGCGCTGCTTTACGCAATCATGAAAGAGGATTTTCCCTATGGTCTCCA CGCCGAAGGCCCCAAAGGCGCCTGATCCGACACAAACCGCAGCGGCGCAGACGGCCACCA ACGTCGACACCGCCATCGCCAATGCGGGGCTGAGCCACACCAATCAGTACACGCCGGATG GTTCGCTGGAATACAAGGTCAGCGGCTACCAGACGATGACCGACCAGAACGGCAAGGCCT ATCGGCTGCCGACCTATTCGGCCTATCAGACCTATTCGCCGGAGAACCAGGCGATCTACG ACCAGACGCAGCAGACGCAGCTCGGCCTTGCCAGGCTCGCCAACGACCAGAGCGGCAAGA TCTCCGGCTTGCTCGGCACCAATGTCGACCTCAGCGCCGGCAATGTCGACAAATATGTCA ACGATCACTGGCAGTCCGGCTTCAACAACCAGTGGGACCGCGATCAGGCAAGCCTCGACC AGAGCCTTGCCGACAAGGGCATCTCGATGGGCTCGGCCGCCTATGACAACGCGCTGCGCG ATTTTTCGACGCGCAAGCAGGCCGCATCCGACCAGTATCTCGGCGACATGTATTCGAATG CTGAGAATTCGATCCTGACCGAGCGAAACCAGCCGCTGAACGAGATTTCCGCGCTGATGT CGGGATCGCAGGTCCACCAGCCAAGCTATGTCAACACGCCGACGACGCAACTGCCGACCG TCGACCAGGCCGGGCTGATCAACGAGAACTACAATCAGCAGATGGGCCTCTACGACCGGC AGGTCGCACAGTCGAACGCGGCGATGGGCGGCCTCTTCGGCCTCGGCGGCTCGCTGCTCG GCGGCTGGGCGAAGTCCGACCGGCGGCTGAAGGAAGACATCAGGCGCGTCGGGATGCTCG ACAACGGCCTGCCGGTCTACGCCTTCCGCTACAAGGAAGGCGGCCCGACCCAGATCGGCC TGATGTCCGACGATGTGCGCACGATGCATCCGGACGCGGTGTTCGAACACGCAGACGGTT TCGACCGCGTCGATTACGGAAGGGCGGTGGGCTGATGGGATTCATCTTTGGCGGCGATAC CGGCAAGACACAGGGCGACATTAGCGACCAGCGCAAGCGGCTGGCCTACGCCATGCTGCA GCAAGGCATGGATGCGAGCCCGATCCAGTCTCCTTGGGAAGGGGTCGCGCGGCTTGCAGA GGGCGGGCTCGGCGGTTTGGCGATCCGCCAGCAGCGGCAGGCGGTTGGCGCCGCAGGGAC CGCCGCTCCGGAGGCTGCGCTTTCGACCCCGGCGGCGACCTCTCCCGGCTTCCTGTCGTT GCTCTTCGGCGGCGGACCAGTGCGCCGGACCGGCGGCTGAAGCAAAGCATCAGGCGCGTC GGCACGCTGAACAACGGTCTGCCGGCCGACGCCTTCAGGCACAAGGATGGCGGCCCGACC CAGATCGGCCGGATATCCGACAATGTACGCAAATTCATCCGGACGCGATGTTCGAACATG CAGACGGTTTCGACCGCGTCGATTACGAAAGGGCTGTGAACCAATGTCATTGAGGTCATT CATTTTCGGCGGCGATACCGGCAAGACACAGGGCGAGATCGACGACCGGCGCAAGCAGTT GGCCTACGCCTTGCTGCAGCAGGGTATGGAGTCGAGTTCCGTACAATCCCCCTGGCAAGG GGCTGCGCGTCTTGTCCAGGCACTCATGGGCGGACTTGCGATCCGCCGGCAGGAGCAGCA GGCAAGCGGCGACGGTAGCGCAGCGCCGGCTGGCGACCCAGGCGATTATCCCTTCGCGCC GCTGCCCGACAACGGACCCGTTCCGCCGCAAAGACCCAATCTTGACCCGCTGATGACGAC GGACGATCGCGGCGGACAGCCCATGGCCCCGGCCGCCCAGCCGGGCGCCGGTCTCTTTGC CCCGCTGCCTGACAACGGGCCCATTCCGACGCCGAGGCCCTATCGCGACCCGATGGTCAC GACCGATTATCGCCGGGAACAGCCTATGGCGGGCGGTCAGCCGCCGCAGTTTCCGTTGGA ACGCTTCGGCGATCCCGTCGCGCCGCCTGCCAACCCGCCCATTCCGACGCCGCGACCCTA TCGCGATCCGATGGTCACGACCGACTATCGCCGCGAGCAGCCGATGGCGGCCGATCAGCC GGGCGACGAGAGCTTCGCTCCGCTGCCTGACAACGGCCCCATTCCTTCGCTGAGACCTGG ATATCGCGACCCGCAGGTGACGACGGACGAACGCCGCCAACAGCCCGCGGCGCCGGTTCC TGGTGGCGGCGGCGCCGGATCCGCAAACGACGGGGCAGAGCTTCAAACGATTCTGTCCGA TCCTGTTCGTAGCGCCAACCTGCCGGCCGGCATGCGCAACAACAATCCCGCCAATCTCAA ATATGTCGGGCAGCATGGGCCAGGAATCATCGGCCCTTCCGAGAACACCGACCAGGGCGA TCCGCAGGTCGTCTATGCCACGCCGGAGGCGGGCATGCGGCACAATGTCTGGCAGATCAT GAGGAAGTATCGAAAAGGCATGCTGACCCCGAATCAGATGATCGCTGGAGCCAGCGGATG GACGCCTAAGTCTTTCACGGCAGCTGCCAACATTGCGCGATCGATGGGCATCGACCCTGA CGACGATCTCCGGCTGACCGACCCGGCAATGGCAAAGAAGTTTGTTCGCGCCCTCATCAC TCAGGAGCAGGGAACATCGGGTGCTCTTTATCCGGACAGCATGATTGAAGCGGCAATCGC TGCACAGTCCAAGGATGCAGTTGCCAGCGTGCCCGTTCCCACCCCGAGGCCGGAATATCC CGATCCGCAGATGACGACGGATGAGCGCCGCCAGCAGCCCGCGACGGCGCCCACGCAGCC CGGCGGCGATCCCTTCGCTCCGCTCGGCAACGTGCCCATTCCCACACCGAGACCCAGCCG CCGCGACCGGCAGGCGACAAGGGGCACCCCCAGCCAGCAACCCGTCGACGCCGATGTCTT CAACGGCTTCATGGACACGGTGAAGAACGGCTATAAGCAGCGGGATGGATCGACCATCCA GGTGACCAACCCTTATGGTCTGGCGGCCATCGCCTCGACGGGCCAGTCCGAAAGCCAGTT CTCGACCAAAAGAGCCAACAGCTCCTGGTCCGACCCGAGCGGAAGCGGAAAGCCGGGCAC CTCGGGCGGCATCATGTCGTGGCGTAATACTCGCCTGCAGAAGCTCTATAACTTTGCGGC TCAGAAGGGCGAAGATGTGGGCGCGATCAGTCCACAGACGCAGGCCGAGTTCTTCCTGCA GGAGGACCCCCGGCTGATCGCCAGGCTGAATGCCGCTCAATCGCTGGAAGAGGCGCAGCG CCTCATGAACAGAGCCTGGCAATTTGACGGTTACGATGAGCCGGGGAACAAGGAGGTCGC CGATCGTCTGGCCACAGCCAGGAGCTTTATGCCGCAGTACCAGACGGAGGGCGGCGCCGA TCCGTTCGCTCTGCCTGACAATCTACCGATTCCGACGCCGGGGCCGGGGCCTCGCGGCCG GCAGGAGACGATGAACCAAGGTCGCGGGCCGGCGGCGTCACAGGCTGCCGGGAAAGCGGA CGCACTCGTCCGAGCTCTGCTTGCTCGGCAGCAAAGTGGCCTCTGGTAGCCCGATCCAGG CTTCTGAGGACAGCAACGGCGGTGGTCCGATTGGATCGCGATCGATCTGCTCGCCGTAGT CGACACTACTCGATCCAGGCCTCGCAACCCGCGGGGCCTTTTCTTTTGGAGAAGGTCAAT GCCCAGAAATCCATCCACCGGCGTCTATTCCAAGCCCGCCGGAACGACACCCGCGGTCGG CCAGGTCATCGACCCCGTGCCGTGGAACGCACTGACCACCGACCTCGGCAACGAAATCAC CAACTCGCTGCCGCGCGACGGCTCGGCGCCGATGGTCGCACCCCTCAAGGCCGCAGGCGG AACGGTGTCCGGCCCGGGCCTCGGCTTCGCCTCGACCCCGCAAACCGGTCTCTATCTGAA GGGTGGTGGGTTGCTGGGGTTCACCCAGAACGGGGTCGACGTCGCCTTCGACAAGGCTTC GGTCTACGCGGCGAAGTCAGGCGATTACACGGCGCTTGCGTCCGACGATAACGCTATCCA TCGCTTCACCGCGGCAGCGACGCTCACCCTGACCGCAGCCGCAACGCTCGGCGCGAACTG GCACTATGCCGTCATTGCCGATGGCGGCGACGTGACGATCGATCCGAATGGCGCGGAGAC GATCGACGGCTCGGCAACGCTTGTCATTAAAAATGGCTACAGCGTCGAAATCATATGTTC CGGTGCCGCTTTCTTCACCAACAAACTCTTCGCCAGGATAGCGAGCAAAGCCGACAGCGC CGCTGTAGGCGATTTCGTCGTCGGGCTCACGCTTTCGAACAACAGCGGCACTCCGAACAC TCATATCGATTTTAGCGCCGGCTCCGCTCGTTTGGGCTCGAGTTTCGTCTCGAACCCGTC GTCGATCACAAAGCGGACAAACGGGACATTCGCTGCCGGCACCGGCGCCGGTGGTCTGGA CACCGGTTCGGTCGCGGCGAATGCAACCTATTTTGCATATGGGCTGCGCAAGGATGACGA TTTGACGTTCGATACCGTGCTGTCGACCTCAGCGACGATCGCCGGAGTCAACACGGCGCT GCTCACCGGCTATACCATCGTCAAATGCATCGGCGTCATGCTGACCGATGCCAACTCGAA CATTCGACCGTTTATCCTGTATCCCCGTGACGAATATACCTTCGTGACGCCGGTCAAAGA TGCGATCAGCGTAGCTATCTCGACGACTTCGGCACTCCTGGCGCTGACGGTGCCAAGTGG GGCGAAGGTCAAGGCGAAGCTGCGGTTTGAATTCACATCCAGCGCGACAACCAATGCTGT ATTGATCCACGATCCGGCGCAGGGGATTCTTGTCGCTGGCATCCCCGGCGATGGCGGAAA CATGGGCACCATCCAAGTCGCCAACGGACTTGCAATTGGCTGTAGCGATATCTGGACGAA TACAAGCAGGCAGATCCGCCAGGTATCTGGCGCTTCCGGCAATATCTGGGTGTGGACTGA TGGTTTCTATTTCCCGTGCGGGAGGAATGCATAA
Region Details
| Region | 1 |
| Region Length | 16.6Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | tail,terminase,portal,head |
| Region Position | 822192-838845 |
| # tRNA | 0 |
| # Total Proteins | 17 |
| # Phage Hit Proteins | 12 |
| # Hypothetical Proteins | 4 |
| Phage + Hypothetical Protein % | 94.1% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Myxoco_Mx8_NC_003085(6) PHAGE_Brucel_Pr_NC_019447(5) PHAGE_Brucel_Tb_NC_019446(4) PHAGE_Sulfit_pCB2047_A_NC_020858(3) PHAGE_Sulfit_NYA_2014a_NC_027299(2) PHAGE_Sulfit_pCB2047_C_NC_020856(2) PHAGE_Shigel_Sf6_NC_005344(1) PHAGE_Rhizob_RHEph04_NC_041908(1) PHAGE_Pseudo_BS5_NC_031917(1) PHAGE_Verruc_P8625_NC_029047(1) PHAGE_Entero_Sf101_NC_027398(1) PHAGE_Salmon_HK620_NC_002730(1) PHAGE_Rhizob_RHEph06_NC_027296(1) PHAGE_Burkho_DC1_NC_018452(1) PHAGE_Burkho_BcepMigl_NC_019917(1) PHAGE_Pseudo_H66_NC_042342(1) PHAGE_Cronob_phiES15_NC_018454(1) PHAGE_Bordet_BPP_1_NC_005357(1) PHAGE_Shewan_3/49_NC_025466(1) PHAGE_Pseudo_PS_1_NC_029066(1) PHAGE_Rhodob_RcapNL_NC_020489(1) |
| First Most Common Phage # | 5 |
| First Most Common Phage % | 35.29% |
| GC % | 63.20% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 2942549-2953000 GACGAACCCAAGTCCGAGTTTTGCCTGTTTGGCGGCGTCCCGGAGTGGAAGCACGAGGTG CTGGAAAAGATAGCCGAAGCCGATCCCGACGAATACCTCGGCAACCTATATGCGAGCGAC TGGATTTACGACCCCACGCACCAGGAGCCGGATCGCGAGGTACGCCTTCTAGCGCTGGGG CCGCTTCCTACCCTTTCCTCCCAGCCTCTCTAAAGCCTACAAGCGCGGACACCCTCGCCG TATGCCTTCGCGGCGGCGAGGTTATCCCCAACCGGGGAGACCGCATCTCGCTGTCCTACG CCACTGCCCCGAACTTTTTTTGCGAAATCCATTCCGAAGGACTTGAGCGTCGCAAAAATT CAGATGACCATGGATTTATCAACTCGTTGGGACAAGCGACCCAACTCAAGGAAAATCAAA TATCCATGCTTTATCAACCTGTTCGCGGGAACGCGGAGGCTATCGGTCTGTGCGAAATCC ACACGGCCGACTGCGTCGAGATACTTTCCGAAATCCCGGACGGATCGATCGACCTAATCG TTACGAGTCCGCCCTACAACGTCGGCAAGCCGTATGAAACGCGCTCGGCACTGGACAGCT ACGTGGACTTTCAGACGGCGGTCATTGAAGAATGCTTTCGCGTCCTCAGCGCAAACGGTT CGATCTGCTGGCAAGTGGGCAACTGGGTCGATGCTTCTGAAATCATACCGCTCGACAGCA TCTTCATTCCCATCTTCCGCCGCCTCGGCATGAAGATCAGAAGCAGGGTGGTCTGGACCT TCGGTCACGGGCTACACTGCACGAAGCGTTTCTCCGGGCGACACGAAACCATTGTCTGGG CAACCAAGTCCGACCAGTACTATTTCGACTTGGACTGTGTTCGCGTCCCTCAGAAATACC CCAACAAGCGCCACTATAAGGGCCCAAACATAGGTCAGCTCAGCGGGAATCCCCTTGGGA AGAACCCGGGCGACGTGTGGGAAATATCCAATGTGAAGAACCGGCATCCCGAAAAGACCA GCCATCCGTGCCAGTTCCCGGAAGAGCTCGTCGAACGCCTTGTCCTGGCTCTTTCGAAAC CAGATCAGACAGTCCTCGATCCCTTCGCGGGATCGGGCACGGTCGGCGCGGTGTGTAATC GGCTTGAACGGAGATCAATCCTCATCGAGCGTTCCCCGGAATATGTCGATATCATTCGCG ATCGCCTCAGCGGATCGAAGCCGCAAGCTCGCACGCAGGTGAGCGGCAAAATGGATCTTG ATCCGTCCATCGACGATCTGTTCTCGGTCGATCAGACATCGACGGTAAATCCGGGATCGA ACCCTGTCCCCTCGCCCGGATACCCTTTTGCGTTCGAAACTATCCTCGTCGAGCCGACCA TGTAGTCGTTTCGATGGTGGATGTGCCCGTGCACCCACAATGTCGGTGCCGTCTCGCAAA TAAGGTCTTCCAAATCCGACGCGTAGCAAGCCGATATCGGATCGTGGCGGAACCAACTGG CGACGGAACGCGGCGACGGCGCGTGGTGCGTCACGACAACCGTCGTTTGGCCGACGCGTT CCCGAAGTTCCGCCGCGATGAACGCCTTCGTCTCGACGTGCTTGCGATAAGCGTCCATCG GCTTGAACTTCTTGAAAGGCAACTTCGACAGCTTGATCTTCTTGTAGTCGTTCATCCCGC TTCGAGCATACGACATGGCGACTTCCGGATTGCGACCGAAAAGCCGAAAATCCGACCACA GTGTTCCGCCGATGAAAGCGACGCCGTCTATTTCCATCGCAGCGTTTTCAAGAAAATGGA GCTTGTGAAAGCCTGCCCCCTGCTCGACCTCGCGCAGACTGTCGACGATGGACGAACCGT AGAACTCGTGGTTGCCCGCCACGAACACGACGGGAATTTTCCGAGCGACGTTCTCGGCGA GCCACCTCATGCTGGGGACAATACCTCGCGTCAGAACATCGCCCGCGCACACCACCACGT CGACATCCTTCGGCGGATCGGTTTTGAACGGAACACCGAATTCGAGATGCAGGTCGGAAA ACACCCAAATCTTCATCATTCTACCCTGGGATCACGCGTGTGCGGCAGGCGGCGCGCGAG CCCGCTGAGTGCTGGCCACCACCGCAATAAATCGACATCCTTCAGTCCTCGACCTCAAAT CCGAGCTTCCGAGGAATGACAATTCTGCCAAAATCCACACTCATCTGGATCGAGAGAGGG TCCAACTCAAAAAACAGCGCGCGTCTGCTTTCGTCCGCGGAAAGCCATCCGTCGCCCAGC CTCCATCGTTTCGCAAACAGGTCAGACAACAAACGGCGACTTCGGTCTTGCAGGAAAACC AAGGCTTCATCTCTCGTCGCATCCCAGTCCGCGTACCGCTTTGTGAAGTCCACCAACCCA GCGGCCTCACTGGCGGGCATCTCCGCGATGTCTTTGATTTTCGCCGTGATATCCTCGGGT ATGCACGAGATCGCATCACAGAGCGCCTCGATGAAGCGCTTGTCCTTCGAGAAGTTCATT CCGGCCTCGTAAGGACTGTCGCGCCAAAGGATTGTTTCGGCAGCCGCTGTCCAGCTGCGA TCCGAAACCAGTCCCAAACTTCGGAAGGCCGGAAAGGCCTCCGCCCCCAAGTAGGCCGGA GGGCAACCATACGCGGCCCGGATGTTCGCTCGCGGAACCGCCGACGATCGTTTGCCGAGG ACCGCTCGACCGCGCCGCCGATATCTTAGTTGCGCCGACTGGCCTGCCTCCCAGACCACA GCTGTGGCTATGTCGTCCCATCGCGGAAGCGTTGCTGGCAAGGCCGGATTGGATATTGGC CTCGAACCACCGTCGACAATGGAGGCCTGGCTCAGCATAGCCATAGCCTGGCATGCCACC TCGTGAGCTGCGATAGAGAGATGTTCCCAGTCACCGTTCGCAGCGCGCGGAAGCGTGAAC CGGAAGAACTCGATTGCGGGGACCGCCCAGTCGGTCGAAATCCGGGGATGCCTTTCGGTC TGTTCGGTCTGCCTGCCAACAATGATCCGGCGGCCCAGCGGCTGAAAACCGATCTCGTCG AGCGCCTCCCCCAGCGAACCAGGCAAAGCAGTCTGTACTCTCTCGCCTTCTCGTGACGAC CTCAAGCGTTTTGCCATGATATCCCCCCATCCCTATAGTGTGCGTTGTATCCACGATACC GCGGGTCAGACTTCGATCACGAAACCTCGGTCGAATTGCCGATAGCATTCTTCCCGGGGA TAACCTCTCGGATTGGCGATCACTCGCGTGTCGTTGAGCGTGTAATCCACGAAATGGTGG ACGTGCCCATGTATCCAGAGAACCGGGCCGCCAGGTGCCATCAAGCCATCGAGGTTAGAT GCGAACGCCGTCGTCAGTAGGTCGGTCCGATATTTCTCTTCGACCGAAAGCATGCTGGGA GCATGATGTGTCACGACGACGACCTTACGATTTGAATGTTTCGCAAGGACACCCTCCAGA AAGCGGCGGCTTTCTTGGTGGATTTTCAATGAATGTATCGGCTTGAAGCGCTGCGACGGT TCATCACCGAAGGCAATGAGCCGGAAATCGTTCATCGCGTCGGTGGCGTTTTGCATTCCC TTTTGCGACCAGTCCGGTCCAAACAGGTCGAAATCCGTCCAGAGCGTCGCACCGGCAAAA ACAACCCCGTTGATTTCCACGCAGCGGTTCTCGAGATAGTGAAGGTCAGCCATTGCATCG TAGCAGGTCGCGGCGATGTGACCGCGCACGAGGTCGCTGTGATAGAACTCGTGGTTGCCC GCGACGAAAACGACCGGCATATGGGCGGCGATACGGTCGTCGAGCCAACGGAGGCTCGGA ACGACACCCCGAGTGAAGATATCGCCGGCGACGACGCAGACGTCGGCCTCCGGGACATCG AGTATGCCGAACTCGCTTATGTCGAGATGGAGATCGGACAGTATCCATAGCTTCATCAGT TTACCCTCTCCAGTCGTGGTTGCCGCGCACTTGTGTCGTTGTCGCGTTTCTCTTCCGCGA ATTCCGTCGCTGCGACGACGACATGGCCTGCCGATTTCAAGAATTCCGAGACCTCCGTCC CGGTCATCGTTTTTCGGACGGTGAGCTCGGTCGCGAGCGCCTCGATCGCGGGCCGATTTT CAGCGATGATCCGTCGCGTCTCGCGCATCCGGGATGCCAGTAATCGGTCCACGCGCGCCC ATAAGTGCGGGCTTCTCAGCCGTAACCTCGAAATCTCGTTGTAATCGTACGGACTGTGCT CGACGACCAGCGTCTCGCCAAAGCCGAGGACGCCCTCGACAAGGGTGGCCAGATAAGTCG CTTTGTTGATATCCGCATCCGGATGGCCGGACGCACCATCGCCATGCTCGCCCACGAGCT CGATCTCCGCGGCCATTCCCGCCAAAGCCACGCACATGTCCCTGTGATAGGTTCGAGCGG TGCGGCGGAGGCCCTCGTCTTCAAGGCGGACGGTTCCCAAGTCGAAGCCTTGGCCAGCGT CCACTCGATAGCGGTCCGCGATCCTGATGCTTTCGATAGTCCGGCCGAAAGCAAGGGCGA CGATCGCATGCCCAACCTCGTGAATCGACAAGATTGCCAGTCGGTCTGAAGGAATGGCCT GCGTCTCCGGCAGGCACGCTAGCAGATCGTCGGCGACAACTGCCCGGTTCAAGCCTCTTG CTCGACGCCGGCTTTCTCTCGCCAGTTGCTCCAGCTCCGCGCCCGACATGCCCTCAGTCT CATCTGTCAGTCGCGCCTCGTGCGAACTCGTGATGACCGTCGGGAGATACTGCCGCAAGA TGGAAAGCCTCGCCGTTGTGTCGGGAAGCGTAATCGCGATGTGACGGTCGAACCTTCCCG GACGAAGGACCGCGGGGTCTATCATTTCGGGATAGTTCGTTGTGCCGATGACGATCACAC CCGATCTCTGGGCCGCTCCGTCCAGGCACTCGAGAAAGCCGTTCACGACCTGGCGGGTAT AAGTCCGCGAGTGGCTATCCTCGGTCGCGCGCGACTGAAAGCTGTCGAGCTCGTCGACGA GCAAGATGGCCGGTGCCGCCGCTTTCGCCATCTCGAAGGCATGGCGCATCGCGGCAAGCA TCTCCCCTTGATGTCCTGCGCTCTGCCATTGCGCGTAAGAGCCGTGGATCAGAGGCACGC CACAGGTGGTCGCAAGAGCCCCGGCAAACCTGGTCTTTCCGACACCGGATGGACCGGACA GCAACAGTCCGGGTTCGACGTCCGTCCACGCGATTTCGCCTTGTCGATAGCGAGCGAGGT CGCGGGCTAATTCAAGACCCCAAAGCTTGGCTTGCCCGTAACCATGGAGGTCCTCCAGGC GGATCGACTTCGTTTTATTGGCCGCCGCTTTTCGCCTTTCATCCATTTCCCTCAACAGTC GCATTGACCGCTCGACCGGCCGCCCGCTCCGGAAGGCTACCAAGACATCGTCAAGCGGCT GCCTGACGATAAATTGTGCGTCGCTAAACGAGACTCTGGTCGAAAACGCTTGGTAGATCG CAGCCTTCACGACGCGTGGGTCGAGCTCGTCGATGACATGATACACGTCGGCGAATTCTC GGATTTGATAGGGGACCTCCTTCTCGTCCTTGAATATCAATACGAGCGCTCTGGGCTCGT GAGCCCGGGCCAACAAGCCTCTCTGTTTTTTCGGTTCCGTGATCTGTTCCACGACCGCAT CGCGGCCGCCCGAGGAACTCCCGGATTTCGCTTTACTGTGCAGGAAAGCTTCGCAAGCCG CCTCGATAGCGTCCGCAAATCCATCGATCGCGACAACGATGGTTGCCAGGAATTTGGCAT CCGCCTGATCGCTCCACGGCCTGAGAAGTCGATTGACGATACAGAACGCCAAGGCGTGCT TTAATGTCGGCAAGCGTTCAACTCCTTTGACGCACAGCAATGCGGTCCGAAACGCATCGG TTGCTAAGAGGTAATCCGGCGATCGAAATTATGGCCGCCACACCGTAAGGCGGGCGGTCA ACCGATCTCTAAAATTGCGGATTGGCAGGGGTGCCGAGGCGATACCATCGCGACATTGTT CGAGCGATCCCGCGTTCGGGATCGAAGTAGAAAAGCTCAGACGAAATCGACGCGTGGCCG TCGAGGATTTTGGGATGGCCAAACGCGGTTCCTAGAAGACACGGGACCTCTCGCCTACTG ACTTTGTAACTATCGATCATCACTGGAATGCTCGAGAGCTGCGGAAAATCAGGTGCCGAC AAATCCGCGACGAGAGACTGCAGTCTCGTGAGCAACGCATGGCGATCGTCGCCGAGATAG ATACCGTTCTGGGTCGCCCTCATATGTGTCTCCGTGGTCCAGCATCTGAAGCTATCGAGA ATCGGAGGCCGATCCCGTTCGCTTGGCGTCTTTGATTACATCTTTATTAACGTATTTCAA GTCATTTAAAACGTATTTTACGTCTTTTTTGACTTACCTCGCGATAACCCGTTTCTGCAG GTAATGACGACTTTGTTGACAGGCGATCTAATACGAGCCGCGCGAGCGCTCATTGCGATG AGTCAAGTGGATCTCGCCAAGAAGGCGGGCATCACCCAGAAGGCGTTGAGTGATTTCGAA TTGGGGAAACAACAGGTCACCGCTAGAGCCAACGAAAAGCTCCGCCGGGTTTTCGATGAA CAGAAAATCCAGTTTATCGCGGCAAACGTGGAATCCAGCCAACTGGAAGGAGCCGGCGTA CGATGGAAACCATCGAAGCCCAACTCCGGCATAAAGACTATTTAGTCAGCGGTACCCGAT CCGGCGAACTGATCGCAAATAGAGGCGGCTGCGCAAGAGGCACGGTAGCCAATCCGCTAG GTAAACCGGCAGGCCGTTGTCTTCGGCGAGGCAGAATATGACCCTTGAACTTGGCGTTCC GTCGTTTCCACGGCCGGAGTGCCGCCGCGATGCCGCCGGTTGGGGCGATCCGGTGGCAAA TGTGTTTTTCGGAATCGGCGTCCGTTGGTCATCGAAATCCACGCAGGAATGCACGTCGTA TCGGGGCCAGCCATGACTGCAAGCGATACGGTGACCGAGAAGCCTATTACCCGCTTCACC GGGCCGGCCGCATCCTATATCGCTTGCGCCGCTCCCGACGCATTTCGAGCAGCCAGGGCG CTCGTCGGCCTCACTCAGGCCGAACTCGCGGCGTCCATTGGGTTGTCCCCCAGATCGCTC GCAGCTTGTGAGGGATCGGGAGGTGCAACGTTGAAGACGATTGCCGTGCTTCGCGACTAC TATGAAAGGGCCGGCATCATATTCCTCGGGACTGTCGATTTGACTACCAAGGAGGTTCAC GGGTCAGGGGCTTGCTGGAACCTAGAGCGGGCATGGTACGAGCATTTGTCGTCGCCGTTC CTCGATTCGTACTTTTCCGCCGCCAGAGCGCTTTTGGGGTGCAAGGAGGTAGTGTTGGCG AAAGAGGCAGGTTTGACGGCGAGACAGGTCGGAAACCTCGAAAGGGGCCGGGCCTTCACC AGGAAAGGTCACGACCAGCTAGGTGACTCTTTCAGAAAAATCGGAGTGGAGTTTGTGGGT TTTAGAACGGGCCGAACCAGTTACATCATTGCCGGGGTCAGAGTGAGAACCGGGGAAGCA CCCTTACCCCCAGGCCTTTATGCAAACCGCGAAGCCAAGTTGCGACGCTCCTATTTTTCC ACCATTTCTGCAGATTTGAGATCGGAAAAGACACGTTAACTGCCGATTTTGCCTTTGTTT TCGGAGCGTGCTTCCGTCGCTTGCTATCCGCAACCGAAACCGGAGACAGCCATGGCGAAC AAGCGCCCCCCACGCAGACCGAAAAGCTCTCGCACGACCTCCAATCCTCATGGCGTGTAT TCCTACAGAGACGTCTGCGAACTGACGACTCTCTCAAGGCAGACCATTTACCTTCTGCGC AAGAAGGGATTGTTTCCCATTTGCCGGAAACTTACGAGCGGTCGGGTCGTCTGGTCGAAA GACGTTATCCACCACTACCTGGCGGGGACCTGGAAGCCTGATCAACCGGAGCCCGATGGC GGGAGTGACGATGACGGTGACGGTGGATAGAGGGCGGCAAGCCGCCCTCTACTTGCTCCG CTCACTTAAAAAATCGGCCGGCTTTTTCAAGTCTCAGAGCCAGATCGATCGCGCCGGCAT TCAAAACCGCCACGATTTCTTTCAGTCTGGCATCGAGTGGAGAATTCCGTGTCTCGATCC ATTGGTGCCGCCACGGGACGTCGTGGAAGGGACTATAGGCTGTAAGCTTCAATCGGCCGC TCGGCCTTCTCCGGAACGTCTTCCATGTGTAGCCAACGAATTCGGCCTTGTTGAATTTGG TCACGGGAACGAAATTTCCGTCGCCCGCATAGGCCAGATACTGATTCTCGCTGACCTCAA CGAGCGCAAGGCCGAGCGGAACGCCTTCGATATGAACGACGGTCGGTCGACGCGGTGCCC AGGGCAGCGGACTGTCCGGGCGTGCCGGATCGGGTTTAACGGACTCGTCGTAATTGTCGA TATCGACCCGGATCAGGATTTCGGAACCGTCTGCGATCTCGACGGGATGACCCGCCTCCT CGAGCGTATTGAACAAGAGGCTGGCGAAACGCAGGCAGCCGTCCAGTCCCGCGGCTGACG TTGCGATATCGACGAGAAGTTTCCTCCGCGGTTTGAGATAAAAGCCGTCTGAACCCGGTT GGGCCGTCCGGAAATCATCCTCGGTCGTACGGACCAGTTCGTGCAGTCCATCTTTCTTTT TAGTTGCGGGGGTCGTCGGCCTCTCCTTCTCGGGCGCGGAGAACTTCAGCTTCTTTGGCT TGCGGCGGCGCGCAAACCCGATGGCGTCCCCTTTTGTCCACGACTGCCTGGTACCCGAGC CCGCCGCGGGAAGCTCGGGCACCGGACCAGCGTTGCCGGTTTCTCTACGCCTCCAGTAAC CGCGCGACGGCCGCGGAACATCCAAGGCCGTGCAGACGAACCCAAGGTAGACGTCGGAGA TTCCAAGCTGCAGGGACACCTCTTGCACTGGGGCGCTCCAGACCAGCGCGTAGAGTTCAT TGCGGGTGATCGTGCTCATCGCTGCCTCCCTCGCGTTGTTCTCTCCGCTTCCTTCCCCGC CGCGGCGCGGCCGAAATCCTCCCAGGAACCACCTGAGGGTTCGTCCTCCCAGAAGTCGTC CTTTGAACCCGCTACCACTTCGTCGAGCCTGTCATGAAGCCTGGCCATTGCCTTCCGTCG TTGTGGAATTTGTCGGTACTGGTCGTAGAGCCCCTCCATTCCCTTCTTGCTGTGGTTGAG GATTCCCTCCGCCACGTCGTTGGCTACATCCAGAGCCGATAGTGCCGTTCGGTCCACCCG CCTGTCGTCGTGCAGCACGAAATGCCGCATGACCTTGGTCGGATCAATCTCCCGGAGGGC CGCCTCCGCCCGGGCGCGCAACGTCTTCGTCGCCCCGCCGAAACCGTTGATCGACCTCTG GCCGTAACTCGAGCTGAACACATAGTCGCCATGCCCCGGAGGCTGGCTGTGACGAAGGTC CGCCAGGAGCTCCATAAGCTGGTCCGAAAGCGGCACGAGGTGCTCGACGAGTTTGCCCTT GACCTTGATGGGGGGCGCTCTCCAGACCCTCCGTCCCGGGTCCAACTCCGACCATCGCAT CTCCGCGACGGCAGTCCTCCGCTCGGCGATCAGAAGTAGGACTTTGAAGTATGGTCCGTA GGGATACGGAATTTCGCCCGCTGCCTGCCAGTACGCCCGTAACTCCCATGGCTCCAGGAC GTGCAGCCGCGCATTCTTCCAGACATCGAAGTCGCCGGCGGTGAGCCCGTCAATCGGATT GACGACGATGCCGTACGGCCCCGAGCGCCCCGGAGCTCTCACCCATCGGAAAAATGCCTG CAGTTGGTCGCAGAGCTGGTAGGCTTGGCTCATCGAGCGGCAGTTCACGCCGTCGACGAT CTCACCGAGGTCGTCGCGGGTCACATCGGCGACGGCTTTCGTCAGTATTTCCGCAGCCTC CGGATTTTCGAGAAGGGTCCGGCGAATCACGGCGATGTCGTCCGTCACATGTCGCGTGTA TCGCCGGTCCGGCAGCCAAGCTATGAAGTCCACGAGGGCCGACCGAAATACCCGCCGCTC CTGGAGGCGCTTCTCCCGCTCGCTGCGCGTCTTCTCTTCCTCAGGGTCGATTCCCTGCTT TATCTTCTCGTTCCAATCGCGGGCGATCGCCCGCGCCTTGTCCAGCGACATGAGGCCGAC GGTCCCGATCTTCCTGCGGGTCGTCCTTACATCGCCCGGGAACCTGGCCATCAGCACGAA CACCTTCGTCAGCGTACCGACCCTGACGACCAGGTTGGCAACCTCGCCGTCGTGTTTGTC ATACCGCTTTCCGGACACGGTGGGCCTCAGCCTCTTGATCGTGTCCTCATCCAACACACG CGCTCTTTTCAT
Region Details
| Region | 2 |
| Region Length | 10.4Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | plate,integrase |
| Region Position | 2942549-2953000 |
| # tRNA | 0 |
| # Total Proteins | 11 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 3 |
| Phage + Hypothetical Protein % | 90.9% |
| # Bacterial Proteins | 1 |
| Attachment Site | yes |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Synech_S_CRM01_NC_015569(1) PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) PHAGE_Acidia_virus_NC_029316(1) PHAGE_Phormi_MIS_PhV1A_NC_029032(1) PHAGE_Burkho_BcepC6B_NC_005887(1) PHAGE_Pectob_CBB_NC_041878(1) PHAGE_Azospi_Cd_NC_010355(1) PHAGE_Mycoba_fionn_NC_027365(1) PHAGE_Caulob_Cr30_NC_025422(1) PHAGE_Burkho_BcepIL02_NC_012743(1) PHAGE_Burkho_DC1_NC_018452(1) PHAGE_Vibrio_11895_B1_NC_020843(1) PHAGE_Mycoba_Cheetobro_NC_028979(1) PHAGE_Caulob_CcrColossus_NC_019406(1) PHAGE_Rhizob_vB_RleM_P10VF_NC_025429(1) PHAGE_Mycoba_PopTart_NC_028961(1) PHAGE_Phormi_MIS_PhV1B_NC_028998(1) PHAGE_Escher_121Q_NC_025447(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 9.09% |
| GC % | 58.51% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|SIOT01000001.1| Rhizobium leguminosarum strain SM138A chrom_SM138A, whole genome 4852724, gc%: 60.95%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 17 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 822192..822428 | PHAGE_Rhodob_RcapNL_NC_020489: tail fiber protein; ELH94_04275; phage(gi461474986) | 1.21e-05 | Showinfo_outline |
| 2 | 822450..822923 | PHAGE_Pseudo_H66_NC_042342: clamp-loader subunit; ELH94_04280; phage(gi100040) | 1.40e-28 | Showinfo_outline |
| 3 | 822889..824460 | PHAGE_Pseudo_PS_1_NC_029066: terminase large subunit; ELH94_04285; phage(gi985757694) | 1.86e-138 | Showinfo_outline |
| 4 | 824460..826559 | PHAGE_Brucel_Pr_NC_019447: putative portal protein; ELH94_04290; phage(gi418487847) | 1.08e-115 | Showinfo_outline |
| 5 | 826573..826884 | hypothetical protein; ELH94_04295 | 0.0 | Showinfo_outline |
| 6 | 827001..828101 | PHAGE_Myxoco_Mx8_NC_003085: hypothetical protein; ELH94_04300; phage(gi15320617) | 7.18e-11 | Showinfo_outline |
| 7 | 828117..829091 | PHAGE_Brucel_Pr_NC_019447: major head protein; ELH94_04305; phage(gi418487852) | 8.56e-33 | Showinfo_outline |
| 8 | 829114..829899 | hypothetical protein; ELH94_04310 | 0.0 | Showinfo_outline |
| 9 | 830268..830840 | PHAGE_Myxoco_Mx8_NC_003085: hypothetical protein; ELH94_04315; phage(gi15320620) | 2.57e-25 | Showinfo_outline |
| 10 | 830857..831564 | PHAGE_Brucel_Pr_NC_019447: structural protein; ELH94_04320; phage(gi418487855) | 9.07e-11 | Showinfo_outline |
| 11 | 831561..833383 | PHAGE_Brucel_Pr_NC_019447: structural protein; ELH94_04325; phage(gi418487856) | 9.95e-33 | Showinfo_outline |
| 12 | 833380..833796 | PHAGE_Burkho_DC1_NC_018452: acetyltransferase; ELH94_04330; phage(gi401723075) | 1.81e-07 | Showinfo_outline |
| 13 | 833762..834766 | PHAGE_Brucel_Pr_NC_019447: structural protein; ELH94_04335; phage(gi418487858) | 3.41e-66 | Showinfo_outline |
| 14 | 834766..835071 | hypothetical protein; ELH94_04340 | 0.0 | Showinfo_outline |
| 15 | 835059..835264 | tail fiber domain-containing protein; ELH94_04345 | 0.0 | Showinfo_outline |
| 16 | 835261..835452 | hypothetical protein; ELH94_04350 | 0.0 | Showinfo_outline |
| 17 | 837490..838845 | PHAGE_Rhizob_RHEph04_NC_041908: DNA polymerase; ELH94_04355; phage(gi100036) | 6.71e-93 | Showinfo_outline |
Sequence
>822192..822428
RhizobiumleguminosarumMDPSIAPASRAAVVTPNDTAIVGARALYIGTAGDVAIAPRRDMDPVIFKSVPAGTILPVHAAIVALTGTTASNIVALF
Sequence
>822450..822923
RhizobiumleguminosarumMGRPIKFTQAIADRICERIADRESLRSICRDEEMPSMSSVLSWLADDEKAAFRVKYALAREIQADGFVDEMVEIADDRADDWIEKKNASGETTGWQENGEAIRRSQLRIATRQWVAEKLKPKKYGSKVEPDHGAVTGGVSQLLEDINGKTRGLPNGN
Sequence
>822889..824460
RhizobiumleguminosarumMARRADFQTAIDQFSDWRWRLNNLYWITDKSGKRVRFEMNWTQMTFFEQMHYLNVLLKARQLGLTTFIQIFMLDACVFNRDIRAGTIAHTLGDVQTIFRDKIKYPYDNLPDGIRNAVPVVRANQTELLLGNNSSIRVGTSLRSGTLQYLHISEYGKLCAKYPDKAREVRTGALNTVQAGQLVFVESTAEGQEGHFYTLCEDGQVKQRQAAKLTELDFKFHFFPWWKEQQYAIAPEGVIITDAFAKYFRNLADQGITLTDGQKAWYVKKAETQLGDMKREYPSTPAEAFEASVEGAYYADQMAVADAEERIGVFPHVEGYPVHTISDIGMDDTNSVWLFQVLPGRVRMIGYFEHTGTGMDGMLDELERRSAEHGYVYGVHNMPHDIKVREWTRGGMTRIEVMLREVKARGLGTVRKIERAYVHDRINGTRRILAKIEFDQAGCIQGIKCLRNYRKDWDEDLSVFRDEPLHNWASHGADAFGGLAIIFTGLAPEPLKPQVKSLPTFQTMTFNEFADSTPAYSERV
Sequence
>824460..826559
RhizobiumleguminosarumMEDETTALADGQQWDLAKVGARWQQELERAQRYFRSWHDRCVKIEKIYLDQQSDQTNAAKRRFPMLWANTSVLQPAVYARVPQPVVERRFKDAQPVARMASELVERNLSYMGDEADIDSIMRAVRDDFLLCARGTVWLRYEADFEPLDMGVQPSDAPANRGLPEGLLGGMGEDGGAPPEAISDERVCIDYVHWSDFLHSPARRWKDVTWVARRVPMTDEEMQKRFGPDAMTSLQAQGAGSNKGSNQTERAENEGKTHVWEIWCKSENYTVWIADGAPVALEVSEPPLDLTHFWPCPRPAYGTMSTSSLIPVPDYVYYQQQCDEIDLLTKRVNKLTDQLRLKVFYPSGDGAISPAIEKAMRPENDTVMVPIPEWAAFTDKGGSKAIVTLPIDEVQKVIIACIQARKQLIEDVYQITGISDIVRGDTQASETATAQRIKSQWGSIRIRDRQSELARFARDIIRLAGEIICDQFQPETLMLVSGIKLPTMAEKQQVQMQMQMAAQQAAARAEQLGQPAPPPPEMPPQLQQMMQQPTIDEVVQLLRNDSIRGFQIDIETDSTIEPDEDAEKQRRMEFVQMIGGFLQQAGAMAQQNPMLVPVMVETLLFAARGFRAGRQLESTLEQVGAQLSEAATAPKPPPEPPAEQMIKLKTAQVKAGAEQRKAELGVAQAEIEHRAVVEQARGEAAAQALQQLQAQQPAYQ
Sequence
>826573..826884
RhizobiumleguminosarumMRERYCRVCGGWHQLDKWPHNCMPVKSQAQSDLPAPHFVSDSIDIQSMHDGRHYTSKAKLRSAYRAAGVVEIGNEKPQPIEKPKTDRKAIRKELRRVHAEYNA
Sequence
>827001..828101
RhizobiumleguminosarumMDMEDLNEAGNGSEDFGAFDDKPLNDRPVSIRDSLKAAIDTVEGNGPGDITGQPRDGENGRFLAKGQEQAATAARAGQAPAANAAQQTPQAQTQMQTREQPAGIGSRVPPGWSTEAKAQFASLPGEVQAAITKREQEVDNGFRVLQDYKGLEEFTPLIRQAGMTHADVMRRAIDWEKALIHDPVNTVVHVARMAGVNLHALVNGQTDQVLQRSSQQAGPQPGLQQGGPQPRHVNVEATVEHVLRKRDTETQVDAFLSDPANAHADDVLDDMIALINAGRATSLQDAYDAACWMRPDIRQQLINQTAQAPVREQQAQRAAAADQARRASRSISGSSAPGPTRDAARGQPTSIRDSLRDAMRFSRGQV
Sequence
>828117..829091
RhizobiumleguminosarumMPISPNLSEIVTTTLRNRSGTVADDVTKNNGLLTRLNSRGRKKPISGGRTIVQELQYQENGSFKRYSGYDILNVQPSDVITAAEYDLKQAAVAVSMSGLEQLQNSGEDAILDLLEQRIENAETTLKNNIALDCYSDGTADGGRQIGGLQLLVSTSPTSGTVGGISRATWGFWRNQKFSASADGGAAASNANIQSYMNRLYMSCVRGSDAPDLVVADNNFFRLYWESLQAIQRITSADKGMAGFQSLQYMGADVIFDGGFGGGAPLNQMFFLNTKYLFYRPHRDRDMAPIGDERMNTNQDAFVQLMGFAGNLTMNNAFLQGVLFA
Sequence
>829114..829899
RhizobiumleguminosarumMSVATIQSDRLGANPFVVEGPIVSGSGIPGPNFSLGAVAGGDRESEWVYCQLVLASQTTLQPGQWFQWTRDYVASLLTTAAAVVGQRCGVFSGAAQPPTLTGGPVGAITLAPGTYYVWLQRNGQAPALVATATAALVVAETTTTAGQASAPASATATTKAIANVNFAAANQTFTATTVNGSNLLTSLSGLNAGSGPFIGAAVSGTGISGGSTISGITYNPNGVIQSITLSANATANGTGITITATGVLEATLMRPFLSKVN
Sequence
>830268..830840
RhizobiumleguminosarumMSDSNTGIYASFSLEPVEQTFLTEKEGRPIFADKEFVRIFISGDKHTEVYREVTDNDKQRFSQAYKRFKEGAAAREQLTGTPLAQWPYLKPSQIKELEAVNIYTVEQLAALSDTVKQKIGMGANELVAAARAYLATAENSSAASAFAAENERLKDEVTRLQEQMREMASRFEALENECQAGAKSRGRVAA
Sequence
>830857..831564
RhizobiumleguminosarumMSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMREHDWSALMVQRQFVTTGANPEPAEPPADWDRFAANSKIWNASRLWQLNGPVEPQTWQRNIILNSNPVPQIWRMAGGKLDIHPNAAGETMAYEYISSFWVALNGEATYAANWAGDTDTARFPEDLLELSLIWRWKRAKGLDYGEEIASFERSKEAAIGADRAASPVDLSLPARGQASENYWPGTITVSNP
Sequence
>831561..833383
RhizobiumleguminosarumMTRRPVPQNARTGRVSPSKDWIAPIGGWRTDVEMADMPADAAFQLDNFFPEANRVRARYGFLAFATGLGADVQTVIPYSGVGNRLFAAAGDKIFDVTAGGAVGAPVVSGMASAHWSVQQYTNPAGQEFLRLVNGLDTPLLFNGTAWTNNFLVGTAALATQNVAVRNTPYTLSFFGTGSVTLSGAFAGTLNGTGVANRVSLTFTPAAGTLVVTVSGTVTNAQLEKGAVATPYVPSTMISGIPDASLLIAVTAYRSRLWFIEKNSTNVWYLATDAVSGTATVLPVGGNMKYGGTLIAINVWTIPVSTGLQQCLVLISSEGEVIVFQGSDPSSVSNWGLIGTFKLGRPLGTDRCLLSVGADLAIMTTDGIVPITKAVQLDRGATSLGRSPPRSARPGARPWRPPARPLRSGSFRASRPGKWRSSTCRPPSVPINMTPKLGPGAASSACRPPAGRPGRTGCSSARATARFMRPKSAPTTMAWRSTRWSAPGAAMATGSRPSSRSSGRRRSGCRRCMPGSRWTTRPRSRQPFCRRSKTMLRRSGERRFGVSRNSPAFRSSANSPPPAAPVRPWRRRSGRSRARPAPSPRPPSAAPCFTKRARRFGA
Sequence
>833380..833796
RhizobiumleguminosarumMIVSEPREQIAAWVGNRIGVSFHPPYTTLAHIDRGRIIAGFVFNVWTEHDVEVSLAADRLTLTLMRSVFRYVVHQLGCRRATARTRADNAESQKVLARLGACLEGRQQAYFGDCDALLYAIMKEDFPYGLHAEGPKGA
Sequence
>833762..834766
RhizobiumleguminosarumMVSTPKAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVSGYQTMTDQNGKAYRLPTYSAYQTYSPENQAIYDQTQQTQLGLARLANDQSGKISGLLGTNVDLSAGNVDKYVNDHWQSGFNNQWDRDQASLDQSLADKGISMGSAAYDNALRDFSTRKQAASDQYLGDMYSNAENSILTERNQPLNEISALMSGSQVHQPSYVNTPTTQLPTVDQAGLINENYNQQMGLYDRQVAQSNAAMGGLFGLGGSLLGGWAKSDRRLKEDIRRVGMLDNGLPVYAFRYKEGGPTQIGLMSDDVRTMHPDAVFEHADGFDRVDYGRAVG
Sequence
>834766..835071
RhizobiumleguminosarumMGFIFGGDTGKTQGDISDQRKRLAYAMLQQGMDASPIQSPWEGVARLAEGGLGGLAIRQQRQAVGAAGTAAPEAALSTPAATSPGFLSLLFGGGPVRRTGG
Sequence
>835059..835264
RhizobiumleguminosarumDRRLKQSIRRVGTLNNGLPADAFRHKDGGPTQIGRISDNVRKFIRTRCSNMQTVSTASITKGLTNVIGA
Sequence
>835261..835452
RhizobiumleguminosarumLRSFIFGGDTGKTQGEIDDRRKQLAYALLQQGMESSSVQSPWQGAARLVQALMGGLAIRRQEQQ
Sequence
>837490..838845
RhizobiumleguminosarumMPRNPSTGVYSKPAGTTPAVGQVIDPVPWNALTTDLGNEITNSLPRDGSAPMVAPLKAAGGTVSGPGLGFASTPQTGLYLKGGGLLGFTQNGVDVAFDKASVYAAKSGDYTALASDDNAIHRFTAAATLTLTAAATLGANWHYAVIADGGDVTIDPNGAETIDGSATLVIKNGYSVEIICSGAAFFTNKLFARIASKADSAAVGDFVVGLTLSNNSGTPNTHIDFSAGSARLGSSFVSNPSSITKRTNGTFAAGTGAGGLDTGSVAANATYFAYGLRKDDDLTFDTVLSTSATIAGVNTALLTGYTIVKCIGVMLTDANSNIRPFILYPRDEYTFVTPVKDAISVAISTTSALLALTVPSGAKVKAKLRFEFTSSATTNAVLIHDPAQGILVAGIPGDGGNMGTIQVANGLAIGCSDIWTNTSRQIRQVSGASGNIWVWTDGFYFPCGRNA
Region 2, total 13 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 2942549..2942560 | attL | 0.0 | Showinfo_outline |
| 2 | 2942974..2943933 | PHAGE_Burkho_DC1_NC_018452: methyltransferase; ELH94_14870; phage(gi401723050) | 6.69e-96 | Showinfo_outline |
| 3 | complement(2943840..2944604) | PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: putative phosphatase; ELH94_14875; phage(gi712912945) | 9.17e-54 | Showinfo_outline |
| 4 | complement(2944690..2945685) | hypothetical protein; ELH94_14880 | 0.0 | Showinfo_outline |
| 5 | complement(2945734..2946504) | PHAGE_Pectob_CBB_NC_041878: baseplate distal hub subunit; ELH94_14885; phage(gi100102) | 7.53e-35 | Showinfo_outline |
| 6 | complement(2946504..2948441) | PHAGE_Acidia_virus_NC_029316: AAA+ ATPase; ELH94_14890; phage(gi1002166819) | 1.21e-15 | Showinfo_outline |
| 7 | complement(2948557..2948871) | hypothetical protein; ELH94_14895 | 0.0 | Showinfo_outline |
| 8 | 2949032..2949313 | PHAGE_Azospi_Cd_NC_010355: hypothetical protein; ELH94_14900; phage(gi168495167) | 2.05e-05 | Showinfo_outline |
| 9 | 2949779..2950267 | hypothetical protein; ELH94_14905 | 0.0 | Showinfo_outline |
| 10 | 2950340..2950618 | AlpA family phage regulatory protein; ELH94_14910 | 0.0 | Showinfo_outline |
| 11 | complement(2950650..2951627) | PHAGE_Vibrio_11895_B1_NC_020843: hypothetical protein; ELH94_14915; phage(gi472340117) | 1.29e-05 | Showinfo_outline |
| 12 | 2951523..2951534 | attR | 0.0 | Showinfo_outline |
| 13 | complement(2951624..2953000) | PHAGE_Burkho_BcepC6B_NC_005887: putative integrase protein; ELH94_14920; phage(gi48697215) | 1.47e-07 | Showinfo_outline |
Sequence
>2942549..2942560
GACGAACCCAAG
Sequence
>2942974..2943933
RhizobiumleguminosarumMLYQPVRGNAEAIGLCEIHTADCVEILSEIPDGSIDLIVTSPPYNVGKPYETRSALDSYVDFQTAVIEECFRVLSANGSICWQVGNWVDASEIIPLDSIFIPIFRRLGMKIRSRVVWTFGHGLHCTKRFSGRHETIVWATKSDQYYFDLDCVRVPQKYPNKRHYKGPNIGQLSGNPLGKNPGDVWEISNVKNRHPEKTSHPCQFPEELVERLVLALSKPDQTVLDPFAGSGTVGAVCNRLERRSILIERSPEYVDIIRDRLSGSKPQARTQVSGKMDLDPSIDDLFSVDQTSTVNPGSNPVPSPGYPFAFETILVEPTM
Sequence
>complement(2943840..2944604)
RhizobiumleguminosarumMKIWVFSDLHLEFGVPFKTDPPKDVDVVVCAGDVLTRGIVPSMRWLAENVARKIPVVFVAGNHEFYGSSIVDSLREVEQGAGFHKLHFLENAAMEIDGVAFIGGTLWSDFRLFGRNPEVAMSYARSGMNDYKKIKLSKLPFKKFKPMDAYRKHVETKAFIAAELRERVGQTTVVVTHHAPSPRSVASWFRHDPISACYASDLEDLICETAPTLWVHGHIHHRNDYMVGSTRIVSNAKGYPGEGTGFDPGFTVDV
Sequence
>complement(2944690..2945685)
RhizobiumleguminosarumMAKRLRSSREGERVQTALPGSLGEALDEIGFQPLGRRIIVGRQTEQTERHPRISTDWAVPAIEFFRFTLPRAANGDWEHLSIAAHEVACQAMAMLSQASIVDGGSRPISNPALPATLPRWDDIATAVVWEAGQSAQLRYRRRGRAVLGKRSSAVPRANIRAAYGCPPAYLGAEAFPAFRSLGLVSDRSWTAAAETILWRDSPYEAGMNFSKDKRFIEALCDAISCIPEDITAKIKDIAEMPASEAAGLVDFTKRYADWDATRDEALVFLQDRSRRLLSDLFAKRWRLGDGWLSADESRRALFFELDPLSIQMSVDFGRIVIPRKLGFEVED
Sequence
>complement(2945734..2946504)
RhizobiumleguminosarumMKLWILSDLHLDISEFGILDVPEADVCVVAGDIFTRGVVPSLRWLDDRIAAHMPVVFVAGNHEFYHSDLVRGHIAATCYDAMADLHYLENRCVEINGVVFAGATLWTDFDLFGPDWSQKGMQNATDAMNDFRLIAFGDEPSQRFKPIHSLKIHQESRRFLEGVLAKHSNRKVVVVTHHAPSMLSVEEKYRTDLLTTAFASNLDGLMAPGGPVLWIHGHVHHFVDYTLNDTRVIANPRGYPREECYRQFDRGFVIEV
Sequence
>complement(2946504..2948441)
RhizobiumleguminosarumMPTLKHALAFCIVNRLLRPWSDQADAKFLATIVVAIDGFADAIEAACEAFLHSKAKSGSSSGGRDAVVEQITEPKKQRGLLARAHEPRALVLIFKDEKEVPYQIREFADVYHVIDELDPRVVKAAIYQAFSTRVSFSDAQFIVRQPLDDVLVAFRSGRPVERSMRLLREMDERRKAAANKTKSIRLEDLHGYGQAKLWGLELARDLARYRQGEIAWTDVEPGLLLSGPSGVGKTRFAGALATTCGVPLIHGSYAQWQSAGHQGEMLAAMRHAFEMAKAAAPAILLVDELDSFQSRATEDSHSRTYTRQVVNGFLECLDGAAQRSGVIVIGTTNYPEMIDPAVLRPGRFDRHIAITLPDTTARLSILRQYLPTVITSSHEARLTDETEGMSGAELEQLARESRRRARGLNRAVVADDLLACLPETQAIPSDRLAILSIHEVGHAIVALAFGRTIESIRIADRYRVDAGQGFDLGTVRLEDEGLRRTARTYHRDMCVALAGMAAEIELVGEHGDGASGHPDADINKATYLATLVEGVLGFGETLVVEHSPYDYNEISRLRLRSPHLWARVDRLLASRMRETRRIIAENRPAIEALATELTVRKTMTGTEVSEFLKSAGHVVVAATEFAEEKRDNDTSARQPRLERVN
Sequence
>complement(2948557..2948871)
RhizobiumleguminosarumMRATQNGIYLGDDRHALLTRLQSLVADLSAPDFPQLSSIPVMIDSYKVSRREVPCLLGTAFGHPKILDGHASISSELFYFDPERGIARTMSRWYRLGTPANPQF
Sequence
>2949032..2949313
RhizobiumleguminosarumMTTLLTGDLIRAARALIAMSQVDLAKKAGITQKALSDFELGKQQVTARANEKLRRVFDEQKIQFIAANVESSQLEGAGVRWKPSKPNSGIKTI
Sequence
>2949779..2950267
RhizobiumleguminosarumMKTIAVLRDYYERAGIIFLGTVDLTTKEVHGSGACWNLERAWYEHLSSPFLDSYFSAARALLGCKEVVLAKEAGLTARQVGNLERGRAFTRKGHDQLGDSFRKIGVEFVGFRTGRTSYIIAGVRVRTGEAPLPPGLYANREAKLRRSYFSTISADLRSEKTR
Sequence
>2950340..2950618
RhizobiumleguminosarumMANKRPPRRPKSSRTTSNPHGVYSYRDVCELTTLSRQTIYLLRKKGLFPICRKLTSGRVVWSKDVIHHYLAGTWKPDQPEPDGGSDDDGDGG
Sequence
>complement(2950650..2951627)
RhizobiumleguminosarumMSTITRNELYALVWSAPVQEVSLQLGISDVYLGFVCTALDVPRPSRGYWRRRETGNAGPVPELPAAGSGTRQSWTKGDAIGFARRRKPKKLKFSAPEKERPTTPATKKKDGLHELVRTTEDDFRTAQPGSDGFYLKPRRKLLVDIATSAAGLDGCLRFASLLFNTLEEAGHPVEIADGSEILIRVDIDNYDESVKPDPARPDSPLPWAPRRPTVVHIEGVPLGLALVEVSENQYLAYAGDGNFVPVTKFNKAEFVGYTWKTFRRRPSGRLKLTAYSPFHDVPWRHQWIETRNSPLDARLKEIVAVLNAGAIDLALRLEKAGRFFK
Sequence
>2951523..2951534
GACGAACCCAAG
Sequence
>complement(2951624..2953000)
RhizobiumleguminosarumMKRARVLDEDTIKRLRPTVSGKRYDKHDGEVANLVVRVGTLTKVFVLMARFPGDVRTTRRKIGTVGLMSLDKARAIARDWNEKIKQGIDPEEEKTRSEREKRLQERRVFRSALVDFIAWLPDRRYTRHVTDDIAVIRRTLLENPEAAEILTKAVADVTRDDLGEIVDGVNCRSMSQAYQLCDQLQAFFRWVRAPGRSGPYGIVVNPIDGLTAGDFDVWKNARLHVLEPWELRAYWQAAGEIPYPYGPYFKVLLLIAERRTAVAEMRWSELDPGRRVWRAPPIKVKGKLVEHLVPLSDQLMELLADLRHSQPPGHGDYVFSSSYGQRSINGFGGATKTLRARAEAALREIDPTKVMRHFVLHDDRRVDRTALSALDVANDVAEGILNHSKKGMEGLYDQYRQIPQRRKAMARLHDRLDEVVAGSKDDFWEDEPSGGSWEDFGRAAAGKEAERTTRGRQR
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 4852724 bps
Phages: 2
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: ELH94_04275 (Region 1)
Locus: ELH94_04275ORF Start: 822192
ORF Stop: 822428
Strand: Forward
Protein Sequence: MDPSIAPASRAAVVTPNDTAIVGARALYIGTAGDVAIAPRRDMDPVIFKSVPAGTILPVHAAIVALTGTTASNIVALF
Homolog/Ortholog Species: Fiber protein
Homolog/Ortholog Protein: ELH94_04275, tail fiber protein, phage(gi461474986), PHAGE_Rhodob_RcapNL_NC_020489
Homolog/Ortholog E-Value: 1.21e-05
Locus 2: ELH94_04280 (Region 1)
Locus: ELH94_04280ORF Start: 822450
ORF Stop: 822923
Strand: Forward
Protein Sequence: MGRPIKFTQAIADRICERIADRESLRSICRDEEMPSMSSVLSWLADDEKAAFRVKYALAREIQADGFVDEMVEIADDRADDWIEKKNASGETTGWQENGEAIRRSQLRIATRQWVAEKLKPKKYGSKVEPDHGAVTGGVSQLLEDINGKTRGLPNGN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04280, clamp-loader subunit, phage(gi100040), PHAGE_Pseudo_H66_NC_042342
Homolog/Ortholog E-Value: 1.40e-28
Locus 3: ELH94_04285 (Region 1)
Locus: ELH94_04285ORF Start: 822889
ORF Stop: 824460
Strand: Forward
Protein Sequence: MARRADFQTAIDQFSDWRWRLNNLYWITDKSGKRVRFEMNWTQMTFFEQMHYLNVLLKARQLGLTTFIQIFMLDACVFNRDIRAGTIAHTLGDVQTIFRDKIKYPYDNLPDGIRNAVPVVRANQTELLLGNNSSIRVGTSLRSGTLQYLHISEYGKLCAKYPDKAREVRTGALNTVQAGQLVFVESTAEGQEGHFYTLCEDGQVKQRQAAKLTELDFKFHFFPWWKEQQYAIAPEGVIITDAFAKYFRNLADQGITLTDGQKAWYVKKAETQLGDMKREYPSTPAEAFEASVEGAYYADQMAVADAEERIGVFPHVEGYPVHTISDIGMDDTNSVWLFQVLPGRVRMIGYFEHTGTGMDGMLDELERRSAEHGYVYGVHNMPHDIKVREWTRGGMTRIEVMLREVKARGLGTVRKIERAYVHDRINGTRRILAKIEFDQAGCIQGIKCLRNYRKDWDEDLSVFRDEPLHNWASHGADAFGGLAIIFTGLAPEPLKPQVKSLPTFQTMTFNEFADSTPAYSERV
Homolog/Ortholog Species: Terminase
Homolog/Ortholog Protein: ELH94_04285, terminase large subunit, phage(gi985757694), PHAGE_Pseudo_PS_1_NC_029066
Homolog/Ortholog E-Value: 1.86e-138
Locus 4: ELH94_04290 (Region 1)
Locus: ELH94_04290ORF Start: 824460
ORF Stop: 826559
Strand: Forward
Protein Sequence: MEDETTALADGQQWDLAKVGARWQQELERAQRYFRSWHDRCVKIEKIYLDQQSDQTNAAKRRFPMLWANTSVLQPAVYARVPQPVVERRFKDAQPVARMASELVERNLSYMGDEADIDSIMRAVRDDFLLCARGTVWLRYEADFEPLDMGVQPSDAPANRGLPEGLLGGMGEDGGAPPEAISDERVCIDYVHWSDFLHSPARRWKDVTWVARRVPMTDEEMQKRFGPDAMTSLQAQGAGSNKGSNQTERAENEGKTHVWEIWCKSENYTVWIADGAPVALEVSEPPLDLTHFWPCPRPAYGTMSTSSLIPVPDYVYYQQQCDEIDLLTKRVNKLTDQLRLKVFYPSGDGAISPAIEKAMRPENDTVMVPIPEWAAFTDKGGSKAIVTLPIDEVQKVIIACIQARKQLIEDVYQITGISDIVRGDTQASETATAQRIKSQWGSIRIRDRQSELARFARDIIRLAGEIICDQFQPETLMLVSGIKLPTMAEKQQVQMQMQMAAQQAAARAEQLGQPAPPPPEMPPQLQQMMQQPTIDEVVQLLRNDSIRGFQIDIETDSTIEPDEDAEKQRRMEFVQMIGGFLQQAGAMAQQNPMLVPVMVETLLFAARGFRAGRQLESTLEQVGAQLSEAATAPKPPPEPPAEQMIKLKTAQVKAGAEQRKAELGVAQAEIEHRAVVEQARGEAAAQALQQLQAQQPAYQ
Homolog/Ortholog Species: Portal protein
Homolog/Ortholog Protein: ELH94_04290, putative portal protein, phage(gi418487847), PHAGE_Brucel_Pr_NC_019447
Homolog/Ortholog E-Value: 1.08e-115
Locus 5: ELH94_04295 (Region 1)
Locus: ELH94_04295ORF Start: 826573
ORF Stop: 826884
Strand: Forward
Protein Sequence: MRERYCRVCGGWHQLDKWPHNCMPVKSQAQSDLPAPHFVSDSIDIQSMHDGRHYTSKAKLRSAYRAAGVVEIGNEKPQPIEKPKTDRKAIRKELRRVHAEYNA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04295, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: ELH94_04300 (Region 1)
Locus: ELH94_04300ORF Start: 827001
ORF Stop: 828101
Strand: Forward
Protein Sequence: MDMEDLNEAGNGSEDFGAFDDKPLNDRPVSIRDSLKAAIDTVEGNGPGDITGQPRDGENGRFLAKGQEQAATAARAGQAPAANAAQQTPQAQTQMQTREQPAGIGSRVPPGWSTEAKAQFASLPGEVQAAITKREQEVDNGFRVLQDYKGLEEFTPLIRQAGMTHADVMRRAIDWEKALIHDPVNTVVHVARMAGVNLHALVNGQTDQVLQRSSQQAGPQPGLQQGGPQPRHVNVEATVEHVLRKRDTETQVDAFLSDPANAHADDVLDDMIALINAGRATSLQDAYDAACWMRPDIRQQLINQTAQAPVREQQAQRAAAADQARRASRSISGSSAPGPTRDAARGQPTSIRDSLRDAMRFSRGQV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04300, hypothetical protein, phage(gi15320617), PHAGE_Myxoco_Mx8_NC_003085
Homolog/Ortholog E-Value: 7.18e-11
Locus 7: ELH94_04305 (Region 1)
Locus: ELH94_04305ORF Start: 828117
ORF Stop: 829091
Strand: Forward
Protein Sequence: MPISPNLSEIVTTTLRNRSGTVADDVTKNNGLLTRLNSRGRKKPISGGRTIVQELQYQENGSFKRYSGYDILNVQPSDVITAAEYDLKQAAVAVSMSGLEQLQNSGEDAILDLLEQRIENAETTLKNNIALDCYSDGTADGGRQIGGLQLLVSTSPTSGTVGGISRATWGFWRNQKFSASADGGAAASNANIQSYMNRLYMSCVRGSDAPDLVVADNNFFRLYWESLQAIQRITSADKGMAGFQSLQYMGADVIFDGGFGGGAPLNQMFFLNTKYLFYRPHRDRDMAPIGDERMNTNQDAFVQLMGFAGNLTMNNAFLQGVLFA
Homolog/Ortholog Species: Head protein
Homolog/Ortholog Protein: ELH94_04305, major head protein, phage(gi418487852), PHAGE_Brucel_Pr_NC_019447
Homolog/Ortholog E-Value: 8.56e-33
Locus 8: ELH94_04310 (Region 1)
Locus: ELH94_04310ORF Start: 829114
ORF Stop: 829899
Strand: Forward
Protein Sequence: MSVATIQSDRLGANPFVVEGPIVSGSGIPGPNFSLGAVAGGDRESEWVYCQLVLASQTTLQPGQWFQWTRDYVASLLTTAAAVVGQRCGVFSGAAQPPTLTGGPVGAITLAPGTYYVWLQRNGQAPALVATATAALVVAETTTTAGQASAPASATATTKAIANVNFAAANQTFTATTVNGSNLLTSLSGLNAGSGPFIGAAVSGTGISGGSTISGITYNPNGVIQSITLSANATANGTGITITATGVLEATLMRPFLSKVN
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04310, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: ELH94_04315 (Region 1)
Locus: ELH94_04315ORF Start: 830268
ORF Stop: 830840
Strand: Forward
Protein Sequence: MSDSNTGIYASFSLEPVEQTFLTEKEGRPIFADKEFVRIFISGDKHTEVYREVTDNDKQRFSQAYKRFKEGAAAREQLTGTPLAQWPYLKPSQIKELEAVNIYTVEQLAALSDTVKQKIGMGANELVAAARAYLATAENSSAASAFAAENERLKDEVTRLQEQMREMASRFEALENECQAGAKSRGRVAA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04315, hypothetical protein, phage(gi15320620), PHAGE_Myxoco_Mx8_NC_003085
Homolog/Ortholog E-Value: 2.57e-25
Locus 10: ELH94_04320 (Region 1)
Locus: ELH94_04320ORF Start: 830857
ORF Stop: 831564
Strand: Forward
Protein Sequence: MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMREHDWSALMVQRQFVTTGANPEPAEPPADWDRFAANSKIWNASRLWQLNGPVEPQTWQRNIILNSNPVPQIWRMAGGKLDIHPNAAGETMAYEYISSFWVALNGEATYAANWAGDTDTARFPEDLLELSLIWRWKRAKGLDYGEEIASFERSKEAAIGADRAASPVDLSLPARGQASENYWPGTITVSNP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04320, structural protein, phage(gi418487855), PHAGE_Brucel_Pr_NC_019447
Homolog/Ortholog E-Value: 9.07e-11
Locus 11: ELH94_04325 (Region 1)
Locus: ELH94_04325ORF Start: 831561
ORF Stop: 833383
Strand: Forward
Protein Sequence: MTRRPVPQNARTGRVSPSKDWIAPIGGWRTDVEMADMPADAAFQLDNFFPEANRVRARYGFLAFATGLGADVQTVIPYSGVGNRLFAAAGDKIFDVTAGGAVGAPVVSGMASAHWSVQQYTNPAGQEFLRLVNGLDTPLLFNGTAWTNNFLVGTAALATQNVAVRNTPYTLSFFGTGSVTLSGAFAGTLNGTGVANRVSLTFTPAAGTLVVTVSGTVTNAQLEKGAVATPYVPSTMISGIPDASLLIAVTAYRSRLWFIEKNSTNVWYLATDAVSGTATVLPVGGNMKYGGTLIAINVWTIPVSTGLQQCLVLISSEGEVIVFQGSDPSSVSNWGLIGTFKLGRPLGTDRCLLSVGADLAIMTTDGIVPITKAVQLDRGATSLGRSPPRSARPGARPWRPPARPLRSGSFRASRPGKWRSSTCRPPSVPINMTPKLGPGAASSACRPPAGRPGRTGCSSARATARFMRPKSAPTTMAWRSTRWSAPGAAMATGSRPSSRSSGRRRSGCRRCMPGSRWTTRPRSRQPFCRRSKTMLRRSGERRFGVSRNSPAFRSSANSPPPAAPVRPWRRRSGRSRARPAPSPRPPSAAPCFTKRARRFGA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04325, structural protein, phage(gi418487856), PHAGE_Brucel_Pr_NC_019447
Homolog/Ortholog E-Value: 9.95e-33
Locus 12: ELH94_04330 (Region 1)
Locus: ELH94_04330ORF Start: 833380
ORF Stop: 833796
Strand: Forward
Protein Sequence: MIVSEPREQIAAWVGNRIGVSFHPPYTTLAHIDRGRIIAGFVFNVWTEHDVEVSLAADRLTLTLMRSVFRYVVHQLGCRRATARTRADNAESQKVLARLGACLEGRQQAYFGDCDALLYAIMKEDFPYGLHAEGPKGA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04330, acetyltransferase, phage(gi401723075), PHAGE_Burkho_DC1_NC_018452
Homolog/Ortholog E-Value: 1.81e-07
Locus 13: ELH94_04335 (Region 1)
Locus: ELH94_04335ORF Start: 833762
ORF Stop: 834766
Strand: Forward
Protein Sequence: MVSTPKAPKAPDPTQTAAAQTATNVDTAIANAGLSHTNQYTPDGSLEYKVSGYQTMTDQNGKAYRLPTYSAYQTYSPENQAIYDQTQQTQLGLARLANDQSGKISGLLGTNVDLSAGNVDKYVNDHWQSGFNNQWDRDQASLDQSLADKGISMGSAAYDNALRDFSTRKQAASDQYLGDMYSNAENSILTERNQPLNEISALMSGSQVHQPSYVNTPTTQLPTVDQAGLINENYNQQMGLYDRQVAQSNAAMGGLFGLGGSLLGGWAKSDRRLKEDIRRVGMLDNGLPVYAFRYKEGGPTQIGLMSDDVRTMHPDAVFEHADGFDRVDYGRAVG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04335, structural protein, phage(gi418487858), PHAGE_Brucel_Pr_NC_019447
Homolog/Ortholog E-Value: 3.41e-66
Locus 14: ELH94_04340 (Region 1)
Locus: ELH94_04340ORF Start: 834766
ORF Stop: 835071
Strand: Forward
Protein Sequence: MGFIFGGDTGKTQGDISDQRKRLAYAMLQQGMDASPIQSPWEGVARLAEGGLGGLAIRQQRQAVGAAGTAAPEAALSTPAATSPGFLSLLFGGGPVRRTGG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04340, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 15: ELH94_04345 (Region 1)
Locus: ELH94_04345ORF Start: 835059
ORF Stop: 835264
Strand: Forward
Protein Sequence: DRRLKQSIRRVGTLNNGLPADAFRHKDGGPTQIGRISDNVRKFIRTRCSNMQTVSTASITKGLTNVIGA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: ELH94_04345, tail fiber domain-containing protein
Homolog/Ortholog E-Value: N/A
Locus 16: ELH94_04350 (Region 1)
Locus: ELH94_04350ORF Start: 835261
ORF Stop: 835452
Strand: Forward
Protein Sequence: LRSFIFGGDTGKTQGEIDDRRKQLAYALLQQGMESSSVQSPWQGAARLVQALMGGLAIRRQEQQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_04350, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 17: ELH94_04355 (Region 1)
Locus: ELH94_04355ORF Start: 837490
ORF Stop: 838845
Strand: Forward
Protein Sequence: MPRNPSTGVYSKPAGTTPAVGQVIDPVPWNALTTDLGNEITNSLPRDGSAPMVAPLKAAGGTVSGPGLGFASTPQTGLYLKGGGLLGFTQNGVDVAFDKASVYAAKSGDYTALASDDNAIHRFTAAATLTLTAAATLGANWHYAVIADGGDVTIDPNGAETIDGSATLVIKNGYSVEIICSGAAFFTNKLFARIASKADSAAVGDFVVGLTLSNNSGTPNTHIDFSAGSARLGSSFVSNPSSITKRTNGTFAAGTGAGGLDTGSVAANATYFAYGLRKDDDLTFDTVLSTSATIAGVNTALLTGYTIVKCIGVMLTDANSNIRPFILYPRDEYTFVTPVKDAISVAISTTSALLALTVPSGAKVKAKLRFEFTSSATTNAVLIHDPAQGILVAGIPGDGGNMGTIQVANGLAIGCSDIWTNTSRQIRQVSGASGNIWVWTDGFYFPCGRNA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_04355, DNA polymerase, phage(gi100036), PHAGE_Rhizob_RHEph04_NC_041908
Homolog/Ortholog E-Value: 6.71e-93
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Locus 1: attL (Region 2)
Locus: attLORF Start: 2942549
ORF Stop: 2942560
Strand: Forward
Protein Sequence: GACGAACCCAAG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: ELH94_14870 (Region 2)
Locus: ELH94_14870ORF Start: 2942974
ORF Stop: 2943933
Strand: Forward
Protein Sequence: MLYQPVRGNAEAIGLCEIHTADCVEILSEIPDGSIDLIVTSPPYNVGKPYETRSALDSYVDFQTAVIEECFRVLSANGSICWQVGNWVDASEIIPLDSIFIPIFRRLGMKIRSRVVWTFGHGLHCTKRFSGRHETIVWATKSDQYYFDLDCVRVPQKYPNKRHYKGPNIGQLSGNPLGKNPGDVWEISNVKNRHPEKTSHPCQFPEELVERLVLALSKPDQTVLDPFAGSGTVGAVCNRLERRSILIERSPEYVDIIRDRLSGSKPQARTQVSGKMDLDPSIDDLFSVDQTSTVNPGSNPVPSPGYPFAFETILVEPTM
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_14870, methyltransferase, phage(gi401723050), PHAGE_Burkho_DC1_NC_018452
Homolog/Ortholog E-Value: 6.69e-96
Locus 3: ELH94_14875 (Region 2)
Locus: ELH94_14875ORF Start: 2943840
ORF Stop: 2944604
Strand: Backward
Protein Sequence: MKIWVFSDLHLEFGVPFKTDPPKDVDVVVCAGDVLTRGIVPSMRWLAENVARKIPVVFVAGNHEFYGSSIVDSLREVEQGAGFHKLHFLENAAMEIDGVAFIGGTLWSDFRLFGRNPEVAMSYARSGMNDYKKIKLSKLPFKKFKPMDAYRKHVETKAFIAAELRERVGQTTVVVTHHAPSPRSVASWFRHDPISACYASDLEDLICETAPTLWVHGHIHHRNDYMVGSTRIVSNAKGYPGEGTGFDPGFTVDV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_14875, putative phosphatase, phage(gi712912945), PHAGE_Rhizob_vB_RleM_P10VF_NC_025429
Homolog/Ortholog E-Value: 9.17e-54
Locus 4: ELH94_14880 (Region 2)
Locus: ELH94_14880ORF Start: 2944690
ORF Stop: 2945685
Strand: Backward
Protein Sequence: MAKRLRSSREGERVQTALPGSLGEALDEIGFQPLGRRIIVGRQTEQTERHPRISTDWAVPAIEFFRFTLPRAANGDWEHLSIAAHEVACQAMAMLSQASIVDGGSRPISNPALPATLPRWDDIATAVVWEAGQSAQLRYRRRGRAVLGKRSSAVPRANIRAAYGCPPAYLGAEAFPAFRSLGLVSDRSWTAAAETILWRDSPYEAGMNFSKDKRFIEALCDAISCIPEDITAKIKDIAEMPASEAAGLVDFTKRYADWDATRDEALVFLQDRSRRLLSDLFAKRWRLGDGWLSADESRRALFFELDPLSIQMSVDFGRIVIPRKLGFEVED
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_14880, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: ELH94_14885 (Region 2)
Locus: ELH94_14885ORF Start: 2945734
ORF Stop: 2946504
Strand: Backward
Protein Sequence: MKLWILSDLHLDISEFGILDVPEADVCVVAGDIFTRGVVPSLRWLDDRIAAHMPVVFVAGNHEFYHSDLVRGHIAATCYDAMADLHYLENRCVEINGVVFAGATLWTDFDLFGPDWSQKGMQNATDAMNDFRLIAFGDEPSQRFKPIHSLKIHQESRRFLEGVLAKHSNRKVVVVTHHAPSMLSVEEKYRTDLLTTAFASNLDGLMAPGGPVLWIHGHVHHFVDYTLNDTRVIANPRGYPREECYRQFDRGFVIEV
Homolog/Ortholog Species: Plate protein
Homolog/Ortholog Protein: ELH94_14885, baseplate distal hub subunit, phage(gi100102), PHAGE_Pectob_CBB_NC_041878
Homolog/Ortholog E-Value: 7.53e-35
Locus 6: ELH94_14890 (Region 2)
Locus: ELH94_14890ORF Start: 2946504
ORF Stop: 2948441
Strand: Backward
Protein Sequence: MPTLKHALAFCIVNRLLRPWSDQADAKFLATIVVAIDGFADAIEAACEAFLHSKAKSGSSSGGRDAVVEQITEPKKQRGLLARAHEPRALVLIFKDEKEVPYQIREFADVYHVIDELDPRVVKAAIYQAFSTRVSFSDAQFIVRQPLDDVLVAFRSGRPVERSMRLLREMDERRKAAANKTKSIRLEDLHGYGQAKLWGLELARDLARYRQGEIAWTDVEPGLLLSGPSGVGKTRFAGALATTCGVPLIHGSYAQWQSAGHQGEMLAAMRHAFEMAKAAAPAILLVDELDSFQSRATEDSHSRTYTRQVVNGFLECLDGAAQRSGVIVIGTTNYPEMIDPAVLRPGRFDRHIAITLPDTTARLSILRQYLPTVITSSHEARLTDETEGMSGAELEQLARESRRRARGLNRAVVADDLLACLPETQAIPSDRLAILSIHEVGHAIVALAFGRTIESIRIADRYRVDAGQGFDLGTVRLEDEGLRRTARTYHRDMCVALAGMAAEIELVGEHGDGASGHPDADINKATYLATLVEGVLGFGETLVVEHSPYDYNEISRLRLRSPHLWARVDRLLASRMRETRRIIAENRPAIEALATELTVRKTMTGTEVSEFLKSAGHVVVAATEFAEEKRDNDTSARQPRLERVN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_14890, AAA+ ATPase, phage(gi1002166819), PHAGE_Acidia_virus_NC_029316
Homolog/Ortholog E-Value: 1.21e-15
Locus 7: ELH94_14895 (Region 2)
Locus: ELH94_14895ORF Start: 2948557
ORF Stop: 2948871
Strand: Backward
Protein Sequence: MRATQNGIYLGDDRHALLTRLQSLVADLSAPDFPQLSSIPVMIDSYKVSRREVPCLLGTAFGHPKILDGHASISSELFYFDPERGIARTMSRWYRLGTPANPQF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_14895, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: ELH94_14900 (Region 2)
Locus: ELH94_14900ORF Start: 2949032
ORF Stop: 2949313
Strand: Forward
Protein Sequence: MTTLLTGDLIRAARALIAMSQVDLAKKAGITQKALSDFELGKQQVTARANEKLRRVFDEQKIQFIAANVESSQLEGAGVRWKPSKPNSGIKTI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_14900, hypothetical protein, phage(gi168495167), PHAGE_Azospi_Cd_NC_010355
Homolog/Ortholog E-Value: 2.05e-05
Locus 9: ELH94_14905 (Region 2)
Locus: ELH94_14905ORF Start: 2949779
ORF Stop: 2950267
Strand: Forward
Protein Sequence: MKTIAVLRDYYERAGIIFLGTVDLTTKEVHGSGACWNLERAWYEHLSSPFLDSYFSAARALLGCKEVVLAKEAGLTARQVGNLERGRAFTRKGHDQLGDSFRKIGVEFVGFRTGRTSYIIAGVRVRTGEAPLPPGLYANREAKLRRSYFSTISADLRSEKTR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_14905, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 10: ELH94_14910 (Region 2)
Locus: ELH94_14910ORF Start: 2950340
ORF Stop: 2950618
Strand: Forward
Protein Sequence: MANKRPPRRPKSSRTTSNPHGVYSYRDVCELTTLSRQTIYLLRKKGLFPICRKLTSGRVVWSKDVIHHYLAGTWKPDQPEPDGGSDDDGDGG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: ELH94_14910, AlpA family phage regulatory protein, phage regulatory protein
Homolog/Ortholog E-Value: N/A
Locus 11: ELH94_14915 (Region 2)
Locus: ELH94_14915ORF Start: 2950650
ORF Stop: 2951627
Strand: Backward
Protein Sequence: MSTITRNELYALVWSAPVQEVSLQLGISDVYLGFVCTALDVPRPSRGYWRRRETGNAGPVPELPAAGSGTRQSWTKGDAIGFARRRKPKKLKFSAPEKERPTTPATKKKDGLHELVRTTEDDFRTAQPGSDGFYLKPRRKLLVDIATSAAGLDGCLRFASLLFNTLEEAGHPVEIADGSEILIRVDIDNYDESVKPDPARPDSPLPWAPRRPTVVHIEGVPLGLALVEVSENQYLAYAGDGNFVPVTKFNKAEFVGYTWKTFRRRPSGRLKLTAYSPFHDVPWRHQWIETRNSPLDARLKEIVAVLNAGAIDLALRLEKAGRFFK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: ELH94_14915, hypothetical protein, phage(gi472340117), PHAGE_Vibrio_11895_B1_NC_020843
Homolog/Ortholog E-Value: 1.29e-05
Locus 12: attR (Region 2)
Locus: attRORF Start: 2951523
ORF Stop: 2951534
Strand: Forward
Protein Sequence: GACGAACCCAAG
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 13: ELH94_14920 (Region 2)
Locus: ELH94_14920ORF Start: 2951624
ORF Stop: 2953000
Strand: Backward
Protein Sequence: MKRARVLDEDTIKRLRPTVSGKRYDKHDGEVANLVVRVGTLTKVFVLMARFPGDVRTTRRKIGTVGLMSLDKARAIARDWNEKIKQGIDPEEEKTRSEREKRLQERRVFRSALVDFIAWLPDRRYTRHVTDDIAVIRRTLLENPEAAEILTKAVADVTRDDLGEIVDGVNCRSMSQAYQLCDQLQAFFRWVRAPGRSGPYGIVVNPIDGLTAGDFDVWKNARLHVLEPWELRAYWQAAGEIPYPYGPYFKVLLLIAERRTAVAEMRWSELDPGRRVWRAPPIKVKGKLVEHLVPLSDQLMELLADLRHSQPPGHGDYVFSSSYGQRSINGFGGATKTLRARAEAALREIDPTKVMRHFVLHDDRRVDRTALSALDVANDVAEGILNHSKKGMEGLYDQYRQIPQRRKAMARLHDRLDEVVAGSKDDFWEDEPSGGSWEDFGRAAAGKEAERTTRGRQR
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: ELH94_14920, putative integrase protein, phage(gi48697215), PHAGE_Burkho_BcepC6B_NC_005887
Homolog/Ortholog E-Value: 1.47e-07
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download