Submission Results
Sequence Name: Not Available
GenBank Accession Number: SOKV01000835.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: SOKV01000835.1.PHASTER.zip
gi|00000000|ref|SOKV01000835.1| Paracoccus sp. DMF 33_newbler_5_len:33268, whole genome shotgun 33268, gc%: 62.52%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 17.9Kb | incomplete | 40 | 17 | 15323-33268 info_outline | PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(5) | 64.07% | Show info_outline |
Region DNA
>1 15323-33268 GCGCCGAGTTCCCGCAGCGTAGGATCGCAGTAGATCGGTGACGATCTCCTCGGGGGGACC GCAGCGCTTCATCAGTTTCCTGAGGAAGTTCAGGGCGGCCTTGCGGTTTCGGGTCTTCGT GACCAGTCCCTCCAGCACCTCGCCCTCATGGTCGACGGCTCGCCAGAGGATGTGCTGCTC GCCGTTGATCTTCACGAACATCTCATCGAGATGCCAGCGCCATTCAGGGCCCGTCCGCAA GCGCGAGGCGCGGCGGCGCCGGATCTCGGCGGCGAACATTGGGCCGAAGCGCATTCACCA CTGCCGGACTGTTTCATGGCAGATGTCGATGCCACGCTCGCGCAGCAGGTCTTCGACGTT CCGAAGCGAGAGCGGGAAGCGCACATAGAGCATGACCGCCAGGCGGATGACCTCGGGCGA GGTCTTAAAGTACCGGAAGGGCGAGGGCTGGGTTATGACAGGGTGGGTAGGGGGCTCGCC GCAGTCCGGCCAGACAGGTTTCCCTGACAGCGCCCCGGCATGCAATCGGGGAACTTTTTT CGAGCCATGGGTAGATATACTCATGACTCGAATCTGCCGCCCTCGTAACGTGTAAGCAAG ATGACATGTCTGGAGTTCTAAGTAACAACAGCGCAGGTAAAGCATGCAGATTGATAATTC GCATTACGCGACATCCGCACAGCGCCGGTCTGTCTCGAATATCATGTCAATCATGTCTGA AGACCTGTCCCGAGCCAACAGGATTTTGTTGGTCGCAGAGGAACTGAACACTCTGGCGCC GCTGGCCGCGATGTCGCTATCGATCTATGACCCGCTGACCCGCAATCACAACTCAATATT TTCGCACGGATATTCCCGGGAAACCGTCGCCTACCTGGACAATTCATACATGTCCATCGA TCCGGCTTATCTGTGGATCCTGCGCACCAACCAGTCGTTCTTCAGCTGGGAAACAACCAA TTTCGATTACTCTCGCAGCATTTCCGCGCGCAATTTCTGGAACCCGGCTGGCTACAAGGG GGGGTCGACCAGCTATCTGAAGAGCCGATCAAACAGATATGTCGGCAATCTGCATACCAG CAGCGAAGATCCCGGCCAGCCATCTGTCGGGTTCCTGAGGATCATTGATGACATTTCGCC CGTGCTGTCTGCGCTGGTCGACAACTGGGAAACACCGAAATCGCTGATCGAAGGGCTGGA GGAACATGCCTGCTCCCTCTTCATCGACGACAAGGGAAACACTCAGCGCCCCCACAGGCA TGAGGCATGTATCTTCGGCAGGATACATGAATTGTCCAACATTGCCGCCAGAAAATACGG CAACATCGACAGCCTGCATGTCATCGGCGCGCGTCTGCCCAGCACCTGCTGGTGCCTATG CGGAGAGATCGTGCATCGCGTCGATTTCAAGATCTGCCATGGCGGCTGGCTTGTAAGCCA CGTCCCCGCGTCCCTACCCTTCGGATTGACCATCAGGCAGGCCGAGGTCTGCTCACTCTC TGCTATCGGCATGACGCGCACCCAGATTGCGGACATTCTGACAATATCTGCACGGACCGT CGATCGGCATATCGAAAATATACTAGAAAAAACCTTCGCCAGAAACCGGATCGAGCTTGC ATATCTCGCCGCGAGCTCCGGCCTGATCAACCTAGATTACCTTGTCGCACATTTCAATTC GGCACAATGCCACAAAAAGGGAGGAGAAGATGACTGAAGCCAGCGAATCCTGCGTCCGGG ATCCGTCGAACTATCGTGACAGGAGCGCCGACTGGTACGCGTTCTATGACGAGCGGCGGC GAAAGGAGATCATTGACATCATTGATGAACACCCCGAAATCGTCGAGGAGCATGCCGCGA ACCCGTTCGGCTACAGGAAGCACCCCAGCCCCTATCTTCAGCGAGTGCACAACTATTTCC GCATGCAACCGACCTTCGGAAAATACTACATCTATTCCGAAAGGGAATGGGACGCCTATC GGATCGCCACGATCAGGGAGTTCGGCGAGCTGCCGGAGTTGGGTGATGAGCGATTCAAGA CCGAAGAAGAGGCCATGCACGCCGTGTTCCTGCGCCGCATCGAAGATGTGCGCGCAGAGC TTGCATAGTCATTTCTCAGCACGAATTCACACAGGGGGAAGACATGAAAGACATTGCCAT TCGCGGATATTGTGACCGCCCCAGCGTCGCCACTGGAGAAACGATCCGCTTTTACGTCAG CGCCAACGAAACCAGGGGGACATTCGATGCCGAGCTGGTCCGGCTGATCCATGGCGACAG CAATCCGGCGGGTCCGGGTTACAAGGAGGAAGCGATCAAATCCGATCTGGAAGGGCAGTA TCCCGCCCGCTTTCAGCGCACCCAGTTCGGAAGCTATGTCGAGGTCGCGGATCCCGACGC CGGGTTGCAGCCCGATGGTGCGTTTTCCGTTCATCTGTTCCTCTGGTCCACAACGCCGAG CCGTGGCCGTCAGGGGATTGCGTCGCGATGGAACGACGAGCGCCAGTCGGGGTGGAACCT CGCGATCGAGGACGGCCGCGTCGTGTTTACGATTGGCGACGGCAGCGGTGCGACCTCCAG TGTCGTCAGTGATCGCCCGCTGTTTCAGCAGATCTGGTATTCGATCACCGGTGTTTATGA TCCCGAAAAGAAACAGCTTCGGCTGTATCAGAAATCCGTCGTGAACCGGACAAACAGCCG CTTCGGGCTTGTCGTCCCGCTCGATTCGGATTGTGCCGTCTCTGCCGATGCCACTGTAAA GGCTGCCGATTCCGAAACCTCGCTGCTGATTGCCGGGCTCGGCGAGGCAGCCGCGCAGGA CGGCCGGACCTGGTGCATCGCCCATTACAACGGCAAGGTCGATGCCCCCAAGATCTATGG CTGCGCGCTGGGCCAAGACGATGCGGAAAAGCTGTCCAGGGGCGAGATCGTGAGGCCTAT TTCCCGCCTTGCCCATTGGGATTTTTCTGCTGGGATCGGGCTGAACGGGATTCCCACCGA TCACGTCGTCGATGCCTCGGGGAATGGGCATCACGGCCGCTGCATGAATCAGCCCGATCG CGGCTCGACCGGGTGGAACTGGGACGGGCATGAGGAGAACTTCATCCACTGCCCCGAGCA GTATGGCGCGCTCTGGTTTCACGAGGACTGCCTGGACGACTGCCGCTGGGAAAAGGATTT CGAGTTCACCGTTCCAGAGGGCCTGAAAAGCGATTTCTACGCGGTGAAGATCCGTTACGA GGACACCGAGGATTACATTCCGTTCTTCGTTCTTCCGCCGCGCGGAACCGCCACGGCGCC GATCCTCGTCATTGCCAGCACGCTGAGCTATCTCGCCTATGCCAATGAGCAGATCATGCA CAAGGCGGATATCGGACAGGCCGTCGCCGGCCATACGCCGGTTCTGAACGAAAACGACGT CGAGTTGCACAAGAACCTGAGCTATTACGGGCTGTCAACCTATGATGGTCATATCGACGG TCGCGGCGTGCAATACACCTCATGGCGGCGCCCGATCATGAACCTTCGCCCGAAACATCG TCAGGGTTTCGGCTCGATCTGGGAGCTTCCCGCCGATCTACACTTGATCGACTGGCTGAA CCATAACGGTTTCGAGTACGACGTCGCCACGGAACATGATCTGAACGATCAGGGCGCGGA ATTGCTGCGCCGCTATAAGGTTGTGCTGACCGGCTCGCATCCCGAATATCAGACTTGGGC CAATGCCGATGCGTGGGAGGATTATCTGGCCGACGGCGGGCGCGGCATGTATCTGGCCGC GAACGGGATGTACTGGATTGTGGAAGTTCATCCGGAAAAGCCCTGGGTCATGGAGGTCCG CAAGGAACTGGGCGTGACCGCTTGGGAAGCGCCGCCCGGCGAATATCACTACAGCACCAA TGGACGGCGCGGCGGTCGTTTCCGTGGACGCGCCCGCGCGACCCAGAAGATCTGGGGCAC CGGAATGAGCAGTTTCGGTTTCGATCATTCGGGTTATTTCGTTCAGATGCCCGACAGCCA GGACGAGCGCGTCGCCTGGATCATGGAGGGGATCGATCCTGAAGAGCGGATCGGCGATGG CGGCCTCGTCGGAGGTGGTGCCGGTGGATATGAGTTGGATCGCTACGATCTTGCTCTGGG CACGCCGCCGAATACCTTACTGCTTGCAAGCTCGGTCGAGCATAGCGTCGTCTATACGGT CATCCCCGATGACAAGGCATTTCCGCATCCGGGGATGAATGGTGGCGAACATCCTTTCGT CCGCGCCGACATCACCTACTTCTCGACCGCAAATGGTGGCGGCATGTTCGCGACATCGTC CATTTCCTGGCTGGGCAGCCTGTCCTGGAATGATTACGATAACAATGTCTCGAAGATGAC CAAGAACGTGCTGAATCAGTTCATCAAGGATGAGCCGGCGCCGCGGGTCTGACCAGAGCC GAGCGGCGGATATTGTCACGATATCCGCCGTGCGCTCGGGCCGTCGTTCCCCCGGTTCGC CATGCACAAAGCGAAGTTGTTTTTCAGCAGGCCTGAAAGCTTGAGCGCTGAACAACATGG CAGGGGGAAAAACGGCGGTTTTCGCTGTGCGCGATGGCCGCTGGTGCTGTTTGGGTCAAA CCCGCGGAGGGGCTGATCAGGCACACAACTCTCTGTCTCGTGCCATATCAGATAGCACGG GAGCGCCGCGAAATCCTGCGCATTATCGGCGGACGGTAAAATCAGCCTCGTCAGGCGATC CTTCGGTGTCGTCGGGTTCATCGTTGACTGTCAGCCGACGGACCGTCGCCAGTAGCTCCT CGATCGCCTGTTCCGCTGCCGCGAGTTTCACGGCCATCATCAGTTCCTCCCGCCCCGCCA TTGCGAGGAACATCCCCAGCACCTCGTCGGAGTGTCGCGCCGGAGCGACCAAATGCTCTC CGCTCGGGCCGTATCTGCCAGCGAACCAGTTCTTCACCGTCTTCTCATTGGCGCCGGTCC AGGAGGCGACGATCTTTGCCCCCGCCCGACTGTCTCCGAGTGATCGCTTCAAGGTCGATG CGATCTCAGCCGCGAACCAGTTGTCCGGCTCGTGCTGACCGTTCCCAGTATGCCTTTTTT CGTTTGGAAAGAACTTGCCCTTTTTCGGAAACGACATTCCGGCCTCCCTCGCGTTACATG GACACGGGGATTCAGCCGCAGCTTTGCGCGGACTGGAGGAATTTGCTTGGAATGACGAGG AGATGCGCGCTTGGGCGGTCGATGGACGACCAATTCGGACAGGAGCGACGGGGCGCCCGA GGTGGATGTGCCCGCGGTCGCTTATGTCCGAATGTCGACGGATCACCAGAAATACTCGAC CGAGAACCAGCTCGACGTCATCCGCAAATATGCATCGGATCGCGGTCTTGAAATCCTGCG CATCTTCGAGGATTCCGGTCGGAGCGGGCTACGCCTCGACGGCCGCGAGGCACTACAGAG CTTGATGGGAGAGGTCGAATCCGGGCAAGCCGACTTCAAGGCGATCCTCGTCTATGACGT CAGCCGCTGGGGCCGGTTTCAGGATGCCGACGAAGGCGCCTACCATGAGCATGTCTGCTC GCGCGCCGGGATCCGCGTCCACTACTGCGGCGAGCAGTTCGAGAATGACGGCAGCATCGG CTCGAACCTGCTGAAAACCGTGAAGCGGGTCATGGCTGGCGAATACAGCCGCGAACTCTC GGTCAAGGTTTTCGCGGGCCAGTGCCGCCTCGTCGAACTCGGTTTTCGCCAGGGCGGCGC GCCCGGATACGGATTGCGCCGGGTGCTGATCGACGAGCACGGCAATCCCAAGGGTGAACT GTCGCGCGGCGAGCAGAAAAGCCTTCAGACCGACAGGGTCATTCTCGTCCTCGGTCCCGA GCACGAACAGGATGTCGTCCGGCGCATGTATCGCATGTTCGTCGAGGACGGCCGATCCGA GCGCGAGATAGTGGATGCCCTGAACGCCGATGGACTGCGCACCGATCTCGACCGGCCATG GACGCGGGCGACGGTCCATCAGGTGCTGACCAACGAGAAATACATCGGCAACAACGTCTT CAACAAGATCTCCTTCAAGCTGAAACAGCGCCGGGTGGTGAACCCGCGCGAGATGTGGAT CCGCGCCGAGGGCGCTTATCCGGCCATCGTCGATGAGGCTCTGTTCCTGCGCGCTCGGGA AATCGTCGATGCGCGCAGCCGCCATTTCTCGGACGAGGAGCTGCTGGATGCCCTGCGCGC GATTCTGAAGCGCCAAGGGATGCTTTCGGGGCTGATCATTGACGAGGAGGACGACGTGCC GTCCTCCAGCGCCTATCGCGGCCGCTTCGGCAGCCTGCTGCGCGCGTACCGACTGATCGG CTATGAGCCCGACCGGGACTACAGCTACATCGAGGTCAACCGGGCGCTGCGGCAGGCCCA TCCACAAGTGGTGGCCGAAATCATCGCTGGCGTCGCCCGGCGCGGCGGGTCAGCCGTGCA GGACCCCGACACCGACCTGGTGCGCGTCAACGGCGAGTTCACGGTGTCCATCGTGCTGGC TCGCTGCACAGCCACAGCGACCGGATCACTGCGCTGGCGCATCCGTCTCGACACCGGCCT GGTTCCCGACATCACGATCGCCGTGCGCATGGACGAGGCGAACGCGGCGCCGCGCGACTA CTACGTGCTGCCCAGCATCGACATCACCTTCGGGAAACTGAAATTCGCCGAGCAGAACGG GCTCGCGCTCGATGCGTACCGGTTCGACACGCTCGATTTCTTCTACGCGCTCGCCTCGCG GGCCAGGATCGCGGAGGTGGCGTGATGCCCGACGACATGGAGCCGATCAGCCAGAAGCAG GTGACCCTGATCCCAACCGAACGGATCCGGGTTCTTAATCCCCGCATCCGCAACGGTCGC ACCTTCGAGGCGATGGTGGAGAACATCGCGCGCATCGGCCTGAAGCGCCCGATCACCGTG GCGCCGCGCGCCGGGACCGATCCGCAGGAATATGACCTCGTCTGTGGACAGGGCCGCCTC GAGGCCTTCATCGAACTGAAGCAGGACCGCATCCCGGCCATTGTGATCGAGGCCGACGAA AGCGATTGCCTTGTGATGAGCCTCGTCGAGAACTGCGCGCGGCGGCAGCACAACCCCATC GATCTGATGCGCGAGATCGGCGCGCTCCGCCAGCGCGGCTACAACGACCGCCAGATCGGC GAGAAGATTGGCGTGTCCACGGAATACGTAAACATGATCGCCGGCCTGTTGGAGAAGGGC TAAGAACGCCTGGTCTCGGCCGTGGAGACCGGGGTTCTTCCGCTGAACCTCGCTATCCAG ATATCCAAGACGGACGCGAAGGGCGCGCAGAAGGCGCTGATGGACGCCTACACGCAGAAC AAGCTGCGGGGCCGGAAGCTGACACTCGTCCGTCGGCTGATCCAGCAGCGTGAACAGCGC GGGCCGCAGCTACGCCACAATCCCTTTGGCCGCCGCGATGGGGCGAAGCGGGCGCTGACC AGCGAAGGGCTGGTGCGGGCCTATCAGCAGGAAGCGACCCGTCAGAAGCTGCTGATCAAG AAGGCCGAACTGACGCAGGGCCGACTGATGTTCGTGCGCGAGGCGTTTCGGAAACTCCGC ACGGACGAGCATTTCATGACGCTTCTGCGAGCCGAAGGACTCGAGACGATGCCGGGCGAC CTCGCCAAGGCTGTCACGGATGGGAGGCCGACTTGATCCGCGATTCGAGCCAGCACCCGC ATGACGTTGATCGCGGCTTCGAGGACGACTGCGTCACCATTGCCATCGAGGCGATCCTCC CTCTGCGCACGCTGGGCAAATCCGCCAAATCAAGTCGGAAGTATCGACAGATCCTTGCTT CCATTGTCGAGATAGGTCTCGTCGAGCCACCGGTCGTGGCGCGAAACCCGGATCGATCCG CCACATGGCTGCTGCTCGACGGGCATATGCGGATCGAGGTATTGAAGGACCAAGGCGTTC AGGAGGTGGAATGTCTGGTTTCCACCGACGATGAGGCGTTCACCTACAACAGGCAAGTCA GCCGCCTCGCCCCGGTCCAGGAACACAAGATGATCCGCAAGGCAATCGAGCGCGGCGTCC CGGAAGAGAAGATCGCGGCCGCGCTCGCTCTCAATCTCAGTAGCATTCGGCGAAAAGTTC ATCTTCTGGACGGGGTCTGCGAGGAGGCGGTGGCGATCCTGAAGGATAAACCCTGCACGG CTGCCGTCTTCGAGGCGCTGCGCAAGATGAAGACCATGCGCCAGATTGAGACCGCAGAAC TGCTCGTGAACGCGAACAACTATTCCGTAGCCTATGTAAATGCGATCCTGGCGGGAACAC CGCAATCGCAATTGCTCGAGTCGTCGAAGCCGAAGAAGGTCAAGGGCATCACACCAGAAG CCATGGCGCGGATGGAACAGGAACTGGCCCGGCTGCAGGAGGGCATCGCTTCGATCCAGG ACACATACGGTCAGGATCACCTGCATTTGACCGTGATCAAAGGATATGTCGGCAGGCTCC TCGGGAACGCTCGTGTGGTGCGGTATCTCGCGCAGAACCATCCAGAATTCTTCGGCGAGT TTAAGACAATTACTGAGATCACACCGGTGGAAACCAATAGCCCCGATTGACGGGCTGGCA GCAGATGATGGGGACCCGGACCCGATAAGCGCGGGGACCGCAGGAGACGCCGGACGGTGG GCCGGATCAAGTGCGGCGGTGGGGATGGCGGCGAACCCGCTCGGAGCCCACCACGTCGGC GGACATATCGCCGACCACGCAGGTATCCCATAGGTGGCTATCTGCGATGTTTGACGCGCG CGCCACTAGCCGGATACTGGGTGCCGGTTGAAGGAGCGGCGCGCCCGCGCGCTGTATGTG GAGTCAGCGCAAACGAGTTGCGGCTGTCAGCAATCGCAACACACGGTGGTCTGGAATGAC CACGAGGCCCAGTTCTTTGATTCGACTGCAACAACGCCCTTTGCTCGGTTTTCTCGCTGA TCCCCTCGGCATGTGTGTCCACATAATGGAACTGGACGGAGACATACCGACATTCGGACG ATCCCGTGCTCTGGCATGCGGACGAAGTCATCCTTGGGTCATTGAAGTGTAATAGCATGC CTCCCTCAGCCGATCTTTGCGCCCCAGAACGAGGAGTGATCGGCGGCGAAATACCCATCC GCCGCGCGGAAGGTGCCCTGCAGCTCGACGGTGTCGCCCTGTGCGAGCAGCACCATGGTC TGCAGCCAGAGCGCCGTCGCCTCGGAGGCATGGGCCCCGGAAATCTCGCCCCGCGATCCC CGGATTTCGGTCGATCCGTTCAGCACCAGTCGCCCGCGCATCCGGGCATTGGTGCTGGAA TTGACCTTGTAGAGCAGCGTGGCGCCGAAGAGGTAGGTGCCATCGACCGGGGCGACGAAG CGGTTGTTGCCGGCATCGAAGGCATCCTGATCGTTATAGTCGGTGTTATTGATGCCGATC TTCGTCCAACTGTCGACGGCGACATAGTTGTCGTAGTTGGTATAGCCCTTGAAGCGCGGC AGCCGGGGCTGATCGACGATGCCGGTGGCGTTGTCGACGATCAGCCCGTCGAAGAAGCTG CTGCCATCAGCCGAAACCGCGAGGCGGAACTTGTCTGAACCGAAGAGGCCGACCAGCGCC TTGGTCACGAAGCCGGTCTGCAGCGTCAGCCCGAGATCGTCGCCCGCAGCCTCCTTGTTC ATCGTGTAGAAGAGATCGCCGGTCCCACCCTCGGCCACGGTCTTCGCCGTCCAGAGCGCC GCATTCAGCTTGGCCGAGAATGGGTTCGACACATCCGCCGTCGTCCCCAGCCCAAGGAGC GCGAGGTTCTGCAGCGATGCCGGGGTTGTCCCGGCCCAGCCAGACCCGTTGTAGACCAGC AACAGGTCCTCGTCCTCGACCCACACCCGCCAGCCGGTCCGGGGCGGCAGGCGCAGCCAG GCGCCGTCCGTCCAGAGCGCCACGCTCAGATCCCAGCCCGCCCAGTCGCCGGTGGCGCCG GAGCCGACGATGTAGCGGTCGCCATCGGCGGGGCTGCCTGGCGGGCTGTTCAGGTTCCGG TCGAGAACGGAGAGCTGGACGAGCCCGTCGAGCAGCCGCAGGGCCTCATTGTGGGTGACA TGCTTCTGGGCCTGCGCCGTCAGGATGTAGGGCAGCAGGAGATGGGTCGTCGTGTCGGAC ATGGGGAAAGCCTTCAGAAGCTGAGGGTCACGGTTTTCGCTGCGCCCCGCCCGATCAGGG CGGAGAGCTGGAAGATGCGGATTGCCAGCGTCTGGCCGGGTCCGAGCGGTGCGCCCCAGT CGGCGGACTGCTGGGTGGCGGCGTAGACTACGCTGGTGCTGGCGGCGGCCAAGGTTCGCT TGACGGCCGGGCCGTCGAGGATCTCGACCTCATAGGCTTCGACCTCCTCGGAGAGCGGCA CCTCGCCGGTGCCCCAGTTGTCCGCCGAGAGGGATCGCGAACGGCGGGTCCAGCGGATCG TGAGATCACCCGGTGTGCGTGGCTTTCGCCATGGCTGCTCGACATGGGCGACCGAGAACG GCCGGCGCCCCACGCCCTCGGGCGTGAAGCTCGTGGCAACATAGGTCTCGTCGCTGACCG GACGGCTTGCCGGGCCGATGCGCCAGTTCCAGGGAAGCCCGAGATCGGCCTCGGCGACCG GCAGCGAGGCAAGGCTCTCGTCCAGCACGACCACCCGCGCACCAGCGGGCGCCGGATTGC CCATCGCACCCTCGGTTCCGCGCTGCCCGCGCAAGAGCCGGGTCAGACGATACGACCGGG CGCCAGCAACTCGGCCGCACCCGCCTGCACGATTTCCCAGATGCCTGGTGCGCTCTCGAT GGCGAGTGCATTGGCGCCGCTGAACAGCGCCAGATCCGTGACGCTCTCCAGCGTGCCCGA AAGCAGATCGACCACCAGCACGTTGCCGAGATCGAAGCGTGAGGTCGGCCCCGACCAGAA ATCCGAAACCAGGACGCCGATCCGCGCCCGACCGCCGAAGGTGGTCAGCAGCTCGAAGCC ATCGGACGAGCCGCTGCGGAACACCGCCATCTCGCCGGGCCATGGAACGGCATGGGCTGC GACGAAGGGACGATGCGCCGGCTGATCCTCGGTCAGTTGCGGCAGGTCCATCACTATCGC GTCGGGCGCTCCGAACACGACCGGGCGCGTCAGCGAGGCCGCACGCGGATCGCCGGGCGG CAGATCATAGGTCGCGCGGTCCTGGCGGATCGCTTCCACTCCGCGTGCCTCGGCATCCGC GACGGAGACGAGACGGAACTCGATCTCCCGCCCGTCATGGGCGAGCCGGATCACGTCGGC GGGATCGAGCGCCAGCCGCGAGGGCGGAAGGCGGAAGATTGCGCTCTCGCGCCCAGTCCA GGCTTCGAGCAGAGCGCGGCGGCAGCGGCGTTCCGCCTCTTCCGGCGGAACGGCCATCGG GAAACTCTCCGATGTGATCCGCGCCGTATCGACGGTGATGCGTCGCGCCTCGACCAGCGC GGCGTCGTAGTCCTCGTCGGCCCGGGCTAGTTGCCATTTCAGCGCCTGCGGCAGCTCGGT TTCCTGGCCCCGCGTCAGTTCCAGCACCTCACCCTCGCGGCTGGAGGCCAGATCGTCGAC CGATAGGGTCAGGCTGGATGCCCGGCCGCGCATGACGAAGCGGATCACGCCCTCGGTCTC GATGGCATCGAAGCCGAAGTGGCGGGCCAAAGTAGAAATCGACGCGCGCGGGCTTTCCAG CGCGCCGATGACATAGCCCTCGACCGCGCCCCAGAGGCCGGAAACGTCGATCAGGCTTTC CGCAAGACCGGCGCGCATGCAGAGGTGGCGCACGAGCGCGGCGAGCGACACCGCGCCCAG CCGACCTGTCAGCCAGTGACCGAGCCGCCAGTTGGGGCCGTCCGTCCAGATGCCCGTCAG TTCGGGGAAGAAGGGATAGGGCCGCGCATCCCAGGTCCAGGCGGCGCATTCCGGCACATG CACCATCCGGTCGCCGTAGATGGCCGAAACCGGATTGTTCGCTGAGGTGCCCCACCAGAG GTAACTGGCCTCGAGGTAGGCACGCTGGATGGCGTCGTCGCGCCAGCCGCGCGAGAAGTA AGGCGTGAAGCTCTCGGAGGACTTCGGGTCGAAGAACACGTTCGGCTGGTTCGTGCCTCG GTCGATGGCGGGGCATCCAAGCTCGGTGAACCAGACGGGCTTTGACTGCGGCACCCATGC CGTCGGCGTGCCGCTCTCGATCCCGCCCGGTCGGTTGAAATGCGGGTTCGACCACCAGGC GCGGAGATCCTTGTAGCGGAAGACCCAGGACTTGCCTGCAGCGCCGTCGGTGATGGGCGT GCGCAGTTGCGCCGACCTGTCGGCCGCACTGGCATAGAACCAGTCGAAGCCCTCGCCCCC GGCAATGTTGGCCTGCAGGTAGGCCCGGTCATGGATGCCGGGCCAGCCCTCGAGGGCGTC GGCATGGTCGAACCCGTCGCGCCAGTCGGAGAGCGGCATGTAGTTGTCGATGCCGATGAA GTCGATGTTCGCGTCCGACCAGAGCGGGTCGAGGTGGAAGAACACGTCCCCTGTTCCATC GCCGGGCTGGTGGCCGAAATACTCGGACCAGTCGGAAGCATAGCCGACCTTGGTGCCCGC GCCGAGGACTGACTTTACATCCGCCGCCAGCGCCTTGAACGCCGTCACGGCCGGATAGGC GCTGCCGCTGGACCGGATCGTCGACAGTCCCCGCATCTCGGTCCCGATCAGGAAGGCATC GACACCTCCCGCCACCGTGCAGAGATGGGCGTAATGCAGGATCATGCGCCTCAGGCCCCA GTCACCCGCGGGGCCGGTCCAGTTCACGTTGTCGCCCGATACTGCGAACTGCGCCAGGGT GGCTGTACCGAAGAAGCTGGAGACCTGTGTTGCGGCGGCTGCTGTCTTGTCCGCAGTTCC GGCATAGCCCGACGCCGGGGAACAGGTGATCCGGCCCCGCCACGGGAAACTCGGCTGGCC CGGCGTCGCGGCATTCGCGCTGTAGGGGTTCGGCAGCGTGTTGCCGGGTGGCACGTCCAT CAGCAGGAAGGGATAGAAGGTGACGCGCAGGCCGCGCGCCTTCATCTCGCGGATCGCCTG CACCACCGCGAAATCCGCAGGTGTGCCGCCATAGACGGGCCGATCCTCGGCATCGCGGCT GACGAGATGGGCGGCGGCCCGTGCCACGCCGTTGACCGTCCACACCTTTGGGCTGGTGAC CTTCGTCGCCACCTCGACGCCCGGTTTGATCGAGCAATTGCCCGCGCGCAGGTCATTGCC GAACCAGGCGACGACGAGGCTGACACTCTCGACGGCCGGGGCCATGGCCTGCAAACGGTC GAGGGCCACGACGATATCGGCCTCATCGGGCAGCGCGTTCAGGTTCTCGGCCGAGGTGGT GCCGCCTGTCGTCTGGCCAAAGATGGTGGTCGTGGCCCCGACTGTCTTGCGGACCGCTTC GGTAGCATAGGTGAACTCGCCCGAGGCCGGGATCATGGTCACGGCTTTGACCAGCCCCTC GGCCGTGTCGGGATCCGCGAGCGGCCGGAAGACCTCGAACGAAAGCTGCGGCAGTCGATT GCCGTAGTTCGAGAGCGCCAGTTCCTCGAAGACCACATAGGCTGTCCCGCGATAGGCTGG GGTATTGGTCACCCCCATTTTGGCCGCGATGAAGGGGTCCGCAGCTTGCGCTTCGTCGCC GGGATACCAGCGCCAGGTGATCCCGGTCATGTCGAGCGGCTTGCCGTCCGCCCAGATGCG GCCGATGCCGGTGATCGGGCCTTCGCACAAGGCGACCGCGAAGGAGGCGTAGTAGAGGTA TTCCGTCGTCTGGACCCGGCCACCGCCGCCGCCCTTGCCGCCGCCCTGTGTCGTGGTCTT GGTCTCCTCGCGGAAATCCGTGGCCCAGATGATGTTGCCGCCAATGCGCATGCGGCCGTA AAGGCGCGGGATGATCGCGCCTTCCGTGGCCGAGGTGATCCGCAAGCTGTCGAGGCGCTG GCCCTCGATCTTCTGCGCGGGCGCCAGCGAGGACACGATCCAGCTATCGACGACCGAACC GATGGTCGAGCCGATGAAACCGCCGATGGCGGCTCCGGAAAAACCGAGGATCGCGCCACC GAACGCCCCGCCGATGGCGGAACCGACAGCGCCGAGGACAAGCGTGGCCATGGGAAAATC TCAGCGAGCGGGGAAGAGGAAGGCGAAGGCGATGCGGCGTCGCCATGTGGGCGTCAGCGG TTCCTCGATCACGCCTAGTCGCTCATAGGCGTGAAGGAAGGTGCCCGGTCCGGTCAGGAT GCCGACATGCTTGGCGATAGCGCGGGGCATCATGCGGAACAGGACCAGCGCGCCGGGTGG GGCATCTGCCGGTGCGATCTCCGGCATCATCGCCCGCGCTCCATCCGCCAGAACCTCGCG CGGACCGGTCTCGCCCCAATCCCGGCTGTAGGGCGGGATCGGGAAGGGCTCCGGCCCGAC CACGTCGCGCCAGACACCGCGCGCGAGGCCGAGGCAGTCGCAGCCGACCCCGCGCAAGCT CGCCTGGTCGTGATAGGGCGTGCCAAGCCAGGATCGGGCAGCGGCGATGACGCGGGTCGG ATCGGCGGCCTTCACAGCACAGCTCCCTCGTGGCCGCCGTCCTTGCTAGCGTAGCGCAGG ACCGCGTCTTGACCTGGGATGTGGGGGAAGCCGCGAAAGTTGGCGACATTGGCGAACTTC GTCCCGCAGGTCGCGATCCGCTTGTCGCAGCCCGCCCGGACCACAAAAGCATCCGTCGCC ATGATCGGCCGCACCGGGGCTTCCAGCAGGGTGAGGATCGCCAGACCGTCGACGAGATCA TGCGACAGCACCTCGACCCGTCGCCCGGCATTCGCCCCAGTCGACCATTCGACGAGACCG AAGGCGAACCACCCCGCCGCGAAACTGCCGAGGCCGGAGGCTGTAAAGGCTCGGTCGCGC AGCGCATCGATCACCGCGCCGATGCCCTTGAAGGCCGGGGCCTCAAGGTTCACGCCGCAG CGTGCATCACCCAGCGCGGCGTCGCAGCTGGCCTGGAACGTTCGTCCGACGGTCTGGCCA AGGATGTGCGCCAGCGACCTGACCTCGGCGACGAAGGCGAGCCGCCCGCGCCGGATCTGA CCGATGGCGCCGCGGCGCAGGAGCACGCGCTGCGCCGGGGCCGACCAGTTCACGCGCCAG ACCTCGACTGCCGCATTGTCCCACCGGCCGTCGAGGATGTCGGTCTCGGTGATCCGGTCC GACGACAGCACCCCTTGGGCATCCTGCGCATCCACGGACAGATCCGACCCCGACCGGACT TCGGACGCCGTCAGCCCGCTTTCCGGTTCGAACTCGGTCCCGTCGAACGACAGCGTCCGG TCGTGATCGGTGAAGCCGAAGGTCACGCCGTCCGCCCGGGTGATCCGCCAGCACCAGGCG AGCGTCGTGGTGCCTTCGTCGAGATGGGCCTGCAGTGCTGGCGGGAGCGACTTCACTTCC GCCCCCAGCCGCGCCAGAGCGCGATCGAGGCCAGCGCCGAGGAGACGACCCCGCCTGCCG CGCCGGTCAGGGCATAGAGGTTGAAGGGCCTGAGGTCGAAGGTTCCGGTCGCCAGGTCGA AATCCGCCAGCCCCGCCATCGCGAGGCCGGAGGCGATAAGGCAGGCGAGATAGACGAGGC CGCGGGCAAAGGTCCAGTTCATGTCGTTTCCTTTCCGGTGAAGAGGCTGGCGAGGCGCTG CCACCAGCTGGGCGCGGTGGCGGGATGGGTGGGAGGCGGCATTGGCGTGCCGCTCGGGCG CAGCAAGGCCAGCGCCTCGGCCTCGGTCAGCCGCCTGATCGGCCGCGAGAAATCCACCCT GCCGTTGCGGTCGACGGCCCAGACCGGGACGGTGCCGGTCGGGTAGATACCTTTCGCGAA GAGATCGCGTTCCGCCTCGCGCCGGGACCGAATGGCGGCGGGCTTGAGCCAGCCCATGAA GGCCGCTGCGGCCGCCGCGCGGTTGCCTGCGTTCAGGTGACGTGTCAGCGCAGCCTTGGC GATGCCACCCGTGTTGTAGTGGAAGGAGACCAGCGCATCGAACTCGTGCGGTTCCAGCGG CACCTTCACCGCGCGCAGCACTTCGGCCTCGTAGGTCGCGAGGTCGGTGCGAAAGAGCCG AAACGCCTCGCTGATCCCGGCTTGCGTGTCGGCGGGCATCCCGCGTGGCATGCGCGCCGG ATCGGGCGGCCCGGCAGCAGCGGTGTGGCCGATGCCAAAGGTCCAGACGTCCCTCACGTC GAGATAGGGTCCGGGCACGACGCCTTCGTGCCGGATCAGGGCCAGAAGCCCCCGGTCGGT GGTCTGCATGGCGGTGGTCCTTTTGGGAAATCAGGGGACGTCGTGGCGGCGTTCGAGCGC GGCGGTCAGCGCCTCGATCCGGGCGAGGATGTTTGCGATCCGCTCGTCGATGACGGCGAT GCGGCGGTCGGCTTCGACGATCTGCCGGTGGTAGAGCGGCGAGGTGGAGAGCAGTTCGGC CACCCGCGCCTCGAGCGACGTCATGCGGGTGTTCTGCGTGCCCGCCCACCAGATCGCGGC CCCGCCCTGCGCCGACAGCGCGAGGGCAAGGCTCAGGTAGGCGGCCAGTGCGCCCATGCG CACGGTCGTGGGTTCGGACATGGGATCGGTCCTTCAGAGGCGGAGTTCGATGAGGGGGAT CGTGGTGATCGATCCGAGACGTTCGAGATCGAGCGTGACGTCGAGGGCGTCAGTGTCGAA GCGGACGGGGACGTCGAATTCGAAACCTGCGGTGATCGCGACGCCTGCGGCCGGGGCGGT GGTGAAGGTGACGAGGCCCGTCGCAGTGGAAACCGACCAGCCGGAGGCCTGCGGCGTGCC GTTCAGGGCTAGGGTGACGGTCCCGGCCACCGGCTTGGTGATCGAGCGCGTCCAGGACTG CGCGCCGGAAGTGTAGCGCTTGGTCAGTTGAAACAGGGTGGCCGATCCGTTGCCGGTGCC AATCGGCTGGTTGGTCGGCCCCGGCGTCTGCGACGGCAGGCAGGACTTGAAATCGGCCCA GTCCTTGAAGCGGAAGCCGTGCAGGCGGCCGTTGCGGGCCTCGAAGAAGGCGACGACCGC CGCCAGATCATCAGCGCGGCGAATGCCATAGGCGACGTCATAGCGGCGGCGGCTGTTGGC CCAGCTGGCGTTGCGTTCCTCGGCGCCCGAGGCGAGCTCGACGATCTGGGTGCGCCGCTC GGGGCCACCGCGTGCGCCGCGGCTGATGTTGTCCGGAAACCGGACCTCGTGGAAGGCCAT CACATCCCCCTCTGCCCGAGGGACACGGCTCGGGCGATGTCGCTGGCGACCTGCGTCCGG GACTGGCGGAAACTCTCGGCGTCGCGGGCGTTGATCGTGACGTTGACGGTGGGCGCGCCG CCTGGCCGTAGCTTGCTGCTTCGCGCCGGGAGAGAACCCGCTCCCCGCGTTGCAGGATCG CGGGCACTTCATCGGGGCGCAGTCCGGCCCAACCGCCGGTGTGCATCCGAGACGCGCCCG CGAATGCCAGGGCCGGGACCATCCGGCCGGGGCTCGGGCCGCCGACCATCCCGCCTGCAT GCAGGATGTTTGCGAAAATCCCGCCTGCCCGCCCAGCGCGCCGGAAAGGGCGTTGGCGAT GGGGCCAAGGATGAAACGCCGGGCGGCGAGCTTGGCGAGATCGGCGATCATCGATGTGAC CAGATCTCGGAAGTCGAGTTTGCCGGTCTTCACGAAGTCGCCGATGGCGTTCTCGGCGCT CTGAAACGCCCCGACCAGCGCGCTGCCGATATCGCCGCCAATGTTGCGAGCCTTCGCGGC GTAGTCGGCGAGCGCCGCGGTGACGGCCTGCCAGCCGATCAGGGCGGTGTCCGCGCCTTC GGCTGC
Region Details
| Region | 1 |
| Region Length | 17.9Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | transposase,lysis,tail |
| Region Position | 15323-33268 |
| # tRNA | 0 |
| # Total Proteins | 17 |
| # Phage Hit Proteins | 10 |
| # Hypothetical Proteins | 4 |
| Phage + Hypothetical Protein % | 82.3% |
| # Bacterial Proteins | 3 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(5) PHAGE_Rhodob_RcCronus_NC_042049(5) PHAGE_Roseob_1_NC_015466(4) PHAGE_Dinoro_vB_DshS_R5C_NC_041921(4) PHAGE_Rhodob_RcRhea_NC_028954(4) PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Roseob_2_NC_041958(2) PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1) PHAGE_Rhizob_RR1_A_NC_021560(1) PHAGE_Clostr_phiCT453B_NC_029004(1) PHAGE_Achrom_83_24_NC_028834(1) PHAGE_Clostr_phiCTC2B_NC_030951(1) PHAGE_Bacill_phBC6A51_NC_004820(1) PHAGE_Gordon_Nyceirae_NC_031004(1) PHAGE_Phage_Gifsy_1_NC_010392(1) PHAGE_Achrom_JWX_NC_028768(1) PHAGE_Xantho_CP1_NC_019933(1) PHAGE_Clostr_phiCT19406B_NC_030947(1) PHAGE_Xantho_Xp15_NC_007024(1) PHAGE_Phage_phiJL001_NC_006938(1) PHAGE_Pseudo_YMC11/02/R656_NC_028657(1) PHAGE_Brucel_BiPBO1_NC_031264(1) |
| First Most Common Phage # | 5 |
| First Most Common Phage % | 29.41% |
| GC % | 64.07% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|SOKV01000835.1| Paracoccus sp. DMF 33_newbler_5_len:33268, whole genome shotgun 33268, gc%: 62.52%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 17 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(15323..15778) | PROPHAGE_Mesorh_MAFF303099: transposase; E3D03_19540; phage(gi13475314) | 6.91e-36 | Showinfo_outline |
| 2 | 15966..17039 | LuxR family transcriptional regulator; E3D03_19545 | 0.0 | Showinfo_outline |
| 3 | 17032..17430 | N,N-dimethylformamidase subunit alpha; E3D03_19550 | 0.0 | Showinfo_outline |
| 4 | 17466..19754 | hypothetical protein; E3D03_19555 | 0.0 | Showinfo_outline |
| 5 | complement(20025..20459) | hypothetical protein; E3D03_19560 | 0.0 | Showinfo_outline |
| 6 | 20553..22127 | PHAGE_Clostr_phiCTC2B_NC_030951: protector from prophage-induced early lysis; E3D03_19565; phage(gi100001) | 9.18e-19 | Showinfo_outline |
| 7 | 22127..23038 | PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; E3D03_19570; phage(gi100046) | 4.51e-07 | Showinfo_outline |
| 8 | 23035..23952 | chromosome partitioning protein ParB; E3D03_19575 | 0.0 | Showinfo_outline |
| 9 | complement(24448..25524) | PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E3D03_19580; phage(gi100020) | 2.50e-40 | Showinfo_outline |
| 10 | complement(25536..29533) | PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E3D03_19585; phage(gi100019) | 0.0 | Showinfo_outline |
| 11 | complement(29543..29977) | PHAGE_Rhodob_RcCronus_NC_042049: exonuclease A; E3D03_19590; phage(gi100018) | 1.80e-19 | Showinfo_outline |
| 12 | complement(29974..30858) | PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E3D03_19595; phage(gi100017) | 3.97e-50 | Showinfo_outline |
| 13 | complement(30855..31064) | hypothetical protein; E3D03_19600 | 0.0 | Showinfo_outline |
| 14 | complement(31061..31711) | PHAGE_Brucel_BiPBO1_NC_031264: replication and recombination DNA helicase; E3D03_19605; phage(gi100033) | 2.52e-24 | Showinfo_outline |
| 15 | complement(31733..32023) | hypothetical protein; E3D03_19610 | 0.0 | Showinfo_outline |
| 16 | complement(32036..32662) | PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E3D03_19615; phage(gi100015) | 8.02e-71 | Showinfo_outline |
| 17 | complement(32662..33268) | PHAGE_Xantho_CP1_NC_019933: putative tail length tape measure protein; E3D03_19620; phage(gi431811013) | 2.53e-11 | Showinfo_outline |
Sequence
>complement(15323..15778)
ParacoccusspDMFITQPSPFRYFKTSPEVIRLAVMLYVRFPLSLRNVEDLLRERGIDICHETVRQWMRFGPMFAAEIRRRRASRLRTGPEWRWHLDEMFVKINGEQHILWRAVDHEGEVLEGLVTKTRNRKAALNFLRKLMKRCGPPEEIVTDLLRSYAAGTRR
Sequence
>15966..17039
ParacoccusspDMFMQIDNSHYATSAQRRSVSNIMSIMSEDLSRANRILLVAEELNTLAPLAAMSLSIYDPLTRNHNSIFSHGYSRETVAYLDNSYMSIDPAYLWILRTNQSFFSWETTNFDYSRSISARNFWNPAGYKGGSTSYLKSRSNRYVGNLHTSSEDPGQPSVGFLRIIDDISPVLSALVDNWETPKSLIEGLEEHACSLFIDDKGNTQRPHRHEACIFGRIHELSNIAARKYGNIDSLHVIGARLPSTCWCLCGEIVHRVDFKICHGGWLVSHVPASLPFGLTIRQAEVCSLSAIGMTRTQIADILTISARTVDRHIENILEKTFARNRIELAYLAASSGLINLDYLVAHFNSAQCHKKGGEDD
Sequence
>17032..17430
ParacoccusspDMFMTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGKYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
Sequence
>17466..19754
ParacoccusspDMFMKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGNGHHGRCMNQPDRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTYDGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRV
Sequence
>complement(20025..20459)
ParacoccusspDMFMSFPKKGKFFPNEKRHTGNGQHEPDNWFAAEIASTLKRSLGDSRAGAKIVASWTGANEKTVKNWFAGRYGPSGEHLVAPARHSDEVLGMFLAMAGREELMMAVKLAAAEQAIEELLATVRRLTVNDEPDDTEGSPDEADFTVRR
Sequence
>20553..22127
ParacoccusspDMFMGGRWTTNSDRSDGAPEVDVPAVAYVRMSTDHQKYSTENQLDVIRKYASDRGLEILRIFEDSGRSGLRLDGREALQSLMGEVESGQADFKAILVYDVSRWGRFQDADEGAYHEHVCSRAGIRVHYCGEQFENDGSIGSNLLKTVKRVMAGEYSRELSVKVFAGQCRLVELGFRQGGAPGYGLRRVLIDEHGNPKGELSRGEQKSLQTDRVILVLGPEHEQDVVRRMYRMFVEDGRSEREIVDALNADGLRTDLDRPWTRATVHQVLTNEKYIGNNVFNKISFKLKQRRVVNPREMWIRAEGAYPAIVDEALFLRAREIVDARSRHFSDEELLDALRAILKRQGMLSGLIIDEEDDVPSSSAYRGRFGSLLRAYRLIGYEPDRDYSYIEVNRALRQAHPQVVAEIIAGVARRGGSAVQDPDTDLVRVNGEFTVSIVLARCTATATGSLRWRIRLDTGLVPDITIAVRMDEANAAPRDYYVLPSIDITFGKLKFAEQNGLALDAYRFDTLDFFYALASRARIAEVA
Sequence
>22127..23038
ParacoccusspDMFMPDDMEPISQKQVTLIPTERIRVLNPRIRNGRTFEAMVENIARIGLKRPITVAPRAGTDPQEYDLVCGQGRLEAFIELKQDRIPAIVIEADESDCLVMSLVENCARRQHNPIDLMREIGALRQRGYNDRQIGEKIGVSTEYVNMIAGLLEKGERLVSAVETGVLPLNLAIQISKTDAKGAQKALMDAYTQNKLRGRKLTLVRRLIQQREQRGPQLRHNPFGRRDGAKRALTSEGLVRAYQQEATRQKLLIKKAELTQGRLMFVREAFRKLRTDEHFMTLLRAEGLETMPGDLAKAVTDGRPT
Sequence
>23035..23952
ParacoccusspDMFMIRDSSQHPHDVDRGFEDDCVTIAIEAILPLRTLGKSAKSSRKYRQILASIVEIGLVEPPVVARNPDRSATWLLLDGHMRIEVLKDQGVQEVECLVSTDDEAFTYNRQVSRLAPVQEHKMIRKAIERGVPEEKIAAALALNLSSIRRKVHLLDGVCEEAVAILKDKPCTAAVFEALRKMKTMRQIETAELLVNANNYSVAYVNAILAGTPQSQLLESSKPKKVKGITPEAMARMEQELARLQEGIASIQDTYGQDHLHLTVIKGYVGRLLGNARVVRYLAQNHPEFFGEFKTITEITPVETNSPD
Sequence
>complement(24448..25524)
ParacoccusspDMFMSDTTTHLLLPYILTAQAQKHVTHNEALRLLDGLVQLSVLDRNLNSPPGSPADGDRYIVGSGATGDWAGWDLSVALWTDGAWLRLPPRTGWRVWVEDEDLLLVYNGSGWAGTTPASLQNLALLGLGTTADVSNPFSAKLNAALWTAKTVAEGGTGDLFYTMNKEAAGDDLGLTLQTGFVTKALVGLFGSDKFRLAVSADGSSFFDGLIVDNATGIVDQPRLPRFKGYTNYDNYVAVDSWTKIGINNTDYNDQDAFDAGNNRFVAPVDGTYLFGATLLYKVNSSTNARMRGRLVLNGSTEIRGSRGEISGAHASEATALWLQTMVLLAQGDTVELQGTFRAADGYFAADHSSFWGAKIG
Sequence
>complement(25536..29533)
ParacoccusspDMFMATLVLGAVGSAIGGAFGGAILGFSGAAIGGFIGSTIGSVVDSWIVSSLAPAQKIEGQRLDSLRITSATEGAIIPRLYGRMRIGGNIIWATDFREETKTTTQGGGKGGGGGRVQTTEYLYYASFAVALCEGPITGIGRIWADGKPLDMTGITWRWYPGDEAQAADPFIAAKMGVTNTPAYRGTAYVVFEELALSNYGNRLPQLSFEVFRPLADPDTAEGLVKAVTMIPASGEFTYATEAVRKTVGATTTIFGQTTGGTTSAENLNALPDEADIVVALDRLQAMAPAVESVSLVVAWFGNDLRAGNCSIKPGVEVATKVTSPKVWTVNGVARAAAHLVSRDAEDRPVYGGTPADFAVVQAIREMKARGLRVTFYPFLLMDVPPGNTLPNPYSANAATPGQPSFPWRGRITCSPASGYAGTADKTAAAATQVSSFFGTATLAQFAVSGDNVNWTGPAGDWGLRRMILHYAHLCTVAGGVDAFLIGTEMRGLSTIRSSGSAYPAVTAFKALAADVKSVLGAGTKVGYASDWSEYFGHQPGDGTGDVFFHLDPLWSDANIDFIGIDNYMPLSDWRDGFDHADALEGWPGIHDRAYLQANIAGGEGFDWFYASAADRSAQLRTPITDGAAGKSWVFRYKDLRAWWSNPHFNRPGGIESGTPTAWVPQSKPVWFTELGCPAIDRGTNQPNVFFDPKSSESFTPYFSRGWRDDAIQRAYLEASYLWWGTSANNPVSAIYGDRMVHVPECAAWTWDARPYPFFPELTGIWTDGPNWRLGHWLTGRLGAVSLAALVRHLCMRAGLAESLIDVSGLWGAVEGYVIGALESPRASISTLARHFGFDAIETEGVIRFVMRGRASSLTLSVDDLASSREGEVLELTRGQETELPQALKWQLARADEDYDAALVEARRITVDTARITSESFPMAVPPEEAERRCRRALLEAWTGRESAIFRLPPSRLALDPADVIRLAHDGREIEFRLVSVADAEARGVEAIRQDRATYDLPPGDPRAASLTRPVVFGAPDAIVMDLPQLTEDQPAHRPFVAAHAVPWPGEMAVFRSGSSDGFELLTTFGGRARIGVLVSDFWSGPTSRFDLGNVLVVDLLSGTLESVTDLALFSGANALAIESAPGIWEIVQAGAAELLAPGRIVPGSCAGSAEPRVRWAIRRPLVRGWSCWTRALPRCRSPRPISGFPGTGASARQAVRSATRPMLPRASRPRAWGAGRSRSPMSSSHGESHAHRVISRSAGPAVRDPSRRTTGAPARCRSPRRSKPMRSRSSTARPSSEPWPPPAPASTPPPSSPPTGAHRSDPARRWQSASSSSPPSGGAQRKPPSASGA
Sequence
>complement(29543..29977)
ParacoccusspDMFMKAADPTRVIAAARSWLGTPYHDQASLRGVGCDCLGLARGVWRDVVGPEPFPIPPYSRDWGETGPREVLADGARAMMPEIAPADAPPGALVLFRMMPRAIAKHVGILTGPGTFLHAYERLGVIEEPLTPTWRRRIAFAFLFPAR
Sequence
>complement(29974..30858)
ParacoccusspDMFMKSLPPALQAHLDEGTTTLAWCWRITRADGVTFGFTDHDRTLSFDGTEFEPESGLTASEVRSGSDLSVDAQDAQGVLSSDRITETDILDGRWDNAAVEVWRVNWSAPAQRVLLRRGAIGQIRRGRLAFVAEVRSLAHILGQTVGRTFQASCDAALGDARCGVNLEAPAFKGIGAVIDALRDRAFTASGLGSFAAGWFAFGLVEWSTGANAGRRVEVLSHDLVDGLAILTLLEAPVRPIMATDAFVVRAGCDKRIATCGTKFANVANFRGFPHIPGQDAVLRYASKDGGHEGAVL
Sequence
>complement(30855..31064)
ParacoccusspDMFMNWTFARGLVYLACLIASGLAMAGLADFDLATGTFDLRPFNLYALTGAAGGVVSSALASIALWRGWGRK
Sequence
>complement(31061..31711)
ParacoccusspDMFMQTTDRGLLALIRHEGVVPGPYLDVRDVWTFGIGHTAAAGPPDPARMPRGMPADTQAGISEAFRLFRTDLATYEAEVLRAVKVPLEPHEFDALVSFHYNTGGIAKAALTRHLNAGNRAAAAAAFMGWLKPAAIRSRREAERDLFAKGIYPTGTVPVWAVDRNGRVDFSRPIRRLTEAEALALLRPSGTPMPPPTHPATAPSWWQRLASLFTGKETT
Sequence
>complement(31733..32023)
ParacoccusspDMFMSEPTTVRMGALAAYLSLALALSAQGGAAIWWAGTQNTRMTSLEARVAELLSTSPLYHRQIVEADRRIAVIDERIANILARIEALTAALERRHDVP
Sequence
>complement(32036..32662)
ParacoccusspDMFMAFHEVRFPDNISRGARGGPERRTQIVELASGAEERNASWANSRRRYDVAYGIRRADDLAAVVAFFEARNGRLHGFRFKDWADFKSCLPSQTPGPTNQPIGTGNGSATLFQLTKRYTSGAQSWTRSITKPVAGTVTLALNGTPQASGWSVSTATGLVTFTTAPAAGVAITAGFEFDVPVRFDTDALDVTLDLERLGSITTIPLIELRL
Sequence
>complement(32662..33268)
ParacoccusspDMFAAEGADTALIGWQAVTAALADYAAKARNIGGDIGSALVGAFQSAENAIGDFVKTGKLDFRDLVTSMIADLAKLAARRFILGPIANALSGALGGQAGFSQTSCMQAGWSAARAPAGWSRPWHSRARLGCTPAVGPDCAPMKCPRSCNAGSGFSPGAKQQATARRRAHRQRHDQRPRRREFPPVPDAGRQRHRPSRVPRAEGDVA
Paracoccus sp
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 33268 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: E3D03_19540 (Region 1)
Locus: E3D03_19540ORF Start: 15323
ORF Stop: 15778
Strand: Backward
Protein Sequence: ITQPSPFRYFKTSPEVIRLAVMLYVRFPLSLRNVEDLLRERGIDICHETVRQWMRFGPMFAAEIRRRRASRLRTGPEWRWHLDEMFVKINGEQHILWRAVDHEGEVLEGLVTKTRNRKAALNFLRKLMKRCGPPEEIVTDLLRSYAAGTRR
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: E3D03_19540, transposase, phage(gi13475314), PROPHAGE_Mesorh_MAFF303099
Homolog/Ortholog E-Value: 6.91e-36
Locus 2: E3D03_19545 (Region 1)
Locus: E3D03_19545ORF Start: 15966
ORF Stop: 17039
Strand: Forward
Protein Sequence: MQIDNSHYATSAQRRSVSNIMSIMSEDLSRANRILLVAEELNTLAPLAAMSLSIYDPLTRNHNSIFSHGYSRETVAYLDNSYMSIDPAYLWILRTNQSFFSWETTNFDYSRSISARNFWNPAGYKGGSTSYLKSRSNRYVGNLHTSSEDPGQPSVGFLRIIDDISPVLSALVDNWETPKSLIEGLEEHACSLFIDDKGNTQRPHRHEACIFGRIHELSNIAARKYGNIDSLHVIGARLPSTCWCLCGEIVHRVDFKICHGGWLVSHVPASLPFGLTIRQAEVCSLSAIGMTRTQIADILTISARTVDRHIENILEKTFARNRIELAYLAASSGLINLDYLVAHFNSAQCHKKGGEDD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: E3D03_19545, LuxR family transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 3: E3D03_19550 (Region 1)
Locus: E3D03_19550ORF Start: 17032
ORF Stop: 17430
Strand: Forward
Protein Sequence: MTEASESCVRDPSNYRDRSADWYAFYDERRRKEIIDIIDEHPEIVEEHAANPFGYRKHPSPYLQRVHNYFRMQPTFGKYYIYSEREWDAYRIATIREFGELPELGDERFKTEEEAMHAVFLRRIEDVRAELA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: E3D03_19550, N,N-dimethylformamidase subunit alpha
Homolog/Ortholog E-Value: N/A
Locus 4: E3D03_19555 (Region 1)
Locus: E3D03_19555ORF Start: 17466
ORF Stop: 19754
Strand: Forward
Protein Sequence: MKDIAIRGYCDRPSVATGETIRFYVSANETRGTFDAELVRLIHGDSNPAGPGYKEEAIKSDLEGQYPARFQRTQFGSYVEVADPDAGLQPDGAFSVHLFLWSTTPSRGRQGIASRWNDERQSGWNLAIEDGRVVFTIGDGSGATSSVVSDRPLFQQIWYSITGVYDPEKKQLRLYQKSVVNRTNSRFGLVVPLDSDCAVSADATVKAADSETSLLIAGLGEAAAQDGRTWCIAHYNGKVDAPKIYGCALGQDDAEKLSRGEIVRPISRLAHWDFSAGIGLNGIPTDHVVDASGNGHHGRCMNQPDRGSTGWNWDGHEENFIHCPEQYGALWFHEDCLDDCRWEKDFEFTVPEGLKSDFYAVKIRYEDTEDYIPFFVLPPRGTATAPILVIASTLSYLAYANEQIMHKADIGQAVAGHTPVLNENDVELHKNLSYYGLSTYDGHIDGRGVQYTSWRRPIMNLRPKHRQGFGSIWELPADLHLIDWLNHNGFEYDVATEHDLNDQGAELLRRYKVVLTGSHPEYQTWANADAWEDYLADGGRGMYLAANGMYWIVEVHPEKPWVMEVRKELGVTAWEAPPGEYHYSTNGRRGGRFRGRARATQKIWGTGMSSFGFDHSGYFVQMPDSQDERVAWIMEGIDPEERIGDGGLVGGGAGGYELDRYDLALGTPPNTLLLASSVEHSVVYTVIPDDKAFPHPGMNGGEHPFVRADITYFSTANGGGMFATSSISWLGSLSWNDYDNNVSKMTKNVLNQFIKDEPAPRV
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19555, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: E3D03_19560 (Region 1)
Locus: E3D03_19560ORF Start: 20025
ORF Stop: 20459
Strand: Backward
Protein Sequence: MSFPKKGKFFPNEKRHTGNGQHEPDNWFAAEIASTLKRSLGDSRAGAKIVASWTGANEKTVKNWFAGRYGPSGEHLVAPARHSDEVLGMFLAMAGREELMMAVKLAAAEQAIEELLATVRRLTVNDEPDDTEGSPDEADFTVRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19560, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: E3D03_19565 (Region 1)
Locus: E3D03_19565ORF Start: 20553
ORF Stop: 22127
Strand: Forward
Protein Sequence: MGGRWTTNSDRSDGAPEVDVPAVAYVRMSTDHQKYSTENQLDVIRKYASDRGLEILRIFEDSGRSGLRLDGREALQSLMGEVESGQADFKAILVYDVSRWGRFQDADEGAYHEHVCSRAGIRVHYCGEQFENDGSIGSNLLKTVKRVMAGEYSRELSVKVFAGQCRLVELGFRQGGAPGYGLRRVLIDEHGNPKGELSRGEQKSLQTDRVILVLGPEHEQDVVRRMYRMFVEDGRSEREIVDALNADGLRTDLDRPWTRATVHQVLTNEKYIGNNVFNKISFKLKQRRVVNPREMWIRAEGAYPAIVDEALFLRAREIVDARSRHFSDEELLDALRAILKRQGMLSGLIIDEEDDVPSSSAYRGRFGSLLRAYRLIGYEPDRDYSYIEVNRALRQAHPQVVAEIIAGVARRGGSAVQDPDTDLVRVNGEFTVSIVLARCTATATGSLRWRIRLDTGLVPDITIAVRMDEANAAPRDYYVLPSIDITFGKLKFAEQNGLALDAYRFDTLDFFYALASRARIAEVA
Homolog/Ortholog Species: Lysis protein
Homolog/Ortholog Protein: E3D03_19565, protector from prophage-induced early lysis, phage(gi100001), PHAGE_Clostr_phiCTC2B_NC_030951
Homolog/Ortholog E-Value: 9.18e-19
Locus 7: E3D03_19570 (Region 1)
Locus: E3D03_19570ORF Start: 22127
ORF Stop: 23038
Strand: Forward
Protein Sequence: MPDDMEPISQKQVTLIPTERIRVLNPRIRNGRTFEAMVENIARIGLKRPITVAPRAGTDPQEYDLVCGQGRLEAFIELKQDRIPAIVIEADESDCLVMSLVENCARRQHNPIDLMREIGALRQRGYNDRQIGEKIGVSTEYVNMIAGLLEKGERLVSAVETGVLPLNLAIQISKTDAKGAQKALMDAYTQNKLRGRKLTLVRRLIQQREQRGPQLRHNPFGRRDGAKRALTSEGLVRAYQQEATRQKLLIKKAELTQGRLMFVREAFRKLRTDEHFMTLLRAEGLETMPGDLAKAVTDGRPT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: E3D03_19570, late promoter transcription, phage(gi100046), PHAGE_Gordon_Nyceirae_NC_031004
Homolog/Ortholog E-Value: 4.51e-07
Locus 8: E3D03_19575 (Region 1)
Locus: E3D03_19575ORF Start: 23035
ORF Stop: 23952
Strand: Forward
Protein Sequence: MIRDSSQHPHDVDRGFEDDCVTIAIEAILPLRTLGKSAKSSRKYRQILASIVEIGLVEPPVVARNPDRSATWLLLDGHMRIEVLKDQGVQEVECLVSTDDEAFTYNRQVSRLAPVQEHKMIRKAIERGVPEEKIAAALALNLSSIRRKVHLLDGVCEEAVAILKDKPCTAAVFEALRKMKTMRQIETAELLVNANNYSVAYVNAILAGTPQSQLLESSKPKKVKGITPEAMARMEQELARLQEGIASIQDTYGQDHLHLTVIKGYVGRLLGNARVVRYLAQNHPEFFGEFKTITEITPVETNSPD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: E3D03_19575, chromosome partitioning protein ParB
Homolog/Ortholog E-Value: N/A
Locus 9: E3D03_19580 (Region 1)
Locus: E3D03_19580ORF Start: 24448
ORF Stop: 25524
Strand: Backward
Protein Sequence: MSDTTTHLLLPYILTAQAQKHVTHNEALRLLDGLVQLSVLDRNLNSPPGSPADGDRYIVGSGATGDWAGWDLSVALWTDGAWLRLPPRTGWRVWVEDEDLLLVYNGSGWAGTTPASLQNLALLGLGTTADVSNPFSAKLNAALWTAKTVAEGGTGDLFYTMNKEAAGDDLGLTLQTGFVTKALVGLFGSDKFRLAVSADGSSFFDGLIVDNATGIVDQPRLPRFKGYTNYDNYVAVDSWTKIGINNTDYNDQDAFDAGNNRFVAPVDGTYLFGATLLYKVNSSTNARMRGRLVLNGSTEIRGSRGEISGAHASEATALWLQTMVLLAQGDTVELQGTFRAADGYFAADHSSFWGAKIG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19580, hypothetical protein, phage(gi100020), PHAGE_Rhodob_RcCronus_NC_042049
Homolog/Ortholog E-Value: 2.50e-40
Locus 10: E3D03_19585 (Region 1)
Locus: E3D03_19585ORF Start: 25536
ORF Stop: 29533
Strand: Backward
Protein Sequence: MATLVLGAVGSAIGGAFGGAILGFSGAAIGGFIGSTIGSVVDSWIVSSLAPAQKIEGQRLDSLRITSATEGAIIPRLYGRMRIGGNIIWATDFREETKTTTQGGGKGGGGGRVQTTEYLYYASFAVALCEGPITGIGRIWADGKPLDMTGITWRWYPGDEAQAADPFIAAKMGVTNTPAYRGTAYVVFEELALSNYGNRLPQLSFEVFRPLADPDTAEGLVKAVTMIPASGEFTYATEAVRKTVGATTTIFGQTTGGTTSAENLNALPDEADIVVALDRLQAMAPAVESVSLVVAWFGNDLRAGNCSIKPGVEVATKVTSPKVWTVNGVARAAAHLVSRDAEDRPVYGGTPADFAVVQAIREMKARGLRVTFYPFLLMDVPPGNTLPNPYSANAATPGQPSFPWRGRITCSPASGYAGTADKTAAAATQVSSFFGTATLAQFAVSGDNVNWTGPAGDWGLRRMILHYAHLCTVAGGVDAFLIGTEMRGLSTIRSSGSAYPAVTAFKALAADVKSVLGAGTKVGYASDWSEYFGHQPGDGTGDVFFHLDPLWSDANIDFIGIDNYMPLSDWRDGFDHADALEGWPGIHDRAYLQANIAGGEGFDWFYASAADRSAQLRTPITDGAAGKSWVFRYKDLRAWWSNPHFNRPGGIESGTPTAWVPQSKPVWFTELGCPAIDRGTNQPNVFFDPKSSESFTPYFSRGWRDDAIQRAYLEASYLWWGTSANNPVSAIYGDRMVHVPECAAWTWDARPYPFFPELTGIWTDGPNWRLGHWLTGRLGAVSLAALVRHLCMRAGLAESLIDVSGLWGAVEGYVIGALESPRASISTLARHFGFDAIETEGVIRFVMRGRASSLTLSVDDLASSREGEVLELTRGQETELPQALKWQLARADEDYDAALVEARRITVDTARITSESFPMAVPPEEAERRCRRALLEAWTGRESAIFRLPPSRLALDPADVIRLAHDGREIEFRLVSVADAEARGVEAIRQDRATYDLPPGDPRAASLTRPVVFGAPDAIVMDLPQLTEDQPAHRPFVAAHAVPWPGEMAVFRSGSSDGFELLTTFGGRARIGVLVSDFWSGPTSRFDLGNVLVVDLLSGTLESVTDLALFSGANALAIESAPGIWEIVQAGAAELLAPGRIVPGSCAGSAEPRVRWAIRRPLVRGWSCWTRALPRCRSPRPISGFPGTGASARQAVRSATRPMLPRASRPRAWGAGRSRSPMSSSHGESHAHRVISRSAGPAVRDPSRRTTGAPARCRSPRRSKPMRSRSSTARPSSEPWPPPAPASTPPPSSPPTGAHRSDPARRWQSASSSSPPSGGAQRKPPSASGA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19585, hypothetical protein, phage(gi100019), PHAGE_Rhodob_RcCronus_NC_042049
Homolog/Ortholog E-Value: 0.0
Locus 11: E3D03_19590 (Region 1)
Locus: E3D03_19590ORF Start: 29543
ORF Stop: 29977
Strand: Backward
Protein Sequence: MKAADPTRVIAAARSWLGTPYHDQASLRGVGCDCLGLARGVWRDVVGPEPFPIPPYSRDWGETGPREVLADGARAMMPEIAPADAPPGALVLFRMMPRAIAKHVGILTGPGTFLHAYERLGVIEEPLTPTWRRRIAFAFLFPAR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: E3D03_19590, exonuclease A, phage(gi100018), PHAGE_Rhodob_RcCronus_NC_042049
Homolog/Ortholog E-Value: 1.80e-19
Locus 12: E3D03_19595 (Region 1)
Locus: E3D03_19595ORF Start: 29974
ORF Stop: 30858
Strand: Backward
Protein Sequence: MKSLPPALQAHLDEGTTTLAWCWRITRADGVTFGFTDHDRTLSFDGTEFEPESGLTASEVRSGSDLSVDAQDAQGVLSSDRITETDILDGRWDNAAVEVWRVNWSAPAQRVLLRRGAIGQIRRGRLAFVAEVRSLAHILGQTVGRTFQASCDAALGDARCGVNLEAPAFKGIGAVIDALRDRAFTASGLGSFAAGWFAFGLVEWSTGANAGRRVEVLSHDLVDGLAILTLLEAPVRPIMATDAFVVRAGCDKRIATCGTKFANVANFRGFPHIPGQDAVLRYASKDGGHEGAVL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19595, hypothetical protein, phage(gi100017), PHAGE_Rhodob_RcCronus_NC_042049
Homolog/Ortholog E-Value: 3.97e-50
Locus 13: E3D03_19600 (Region 1)
Locus: E3D03_19600ORF Start: 30855
ORF Stop: 31064
Strand: Backward
Protein Sequence: MNWTFARGLVYLACLIASGLAMAGLADFDLATGTFDLRPFNLYALTGAAGGVVSSALASIALWRGWGRK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19600, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 14: E3D03_19605 (Region 1)
Locus: E3D03_19605ORF Start: 31061
ORF Stop: 31711
Strand: Backward
Protein Sequence: MQTTDRGLLALIRHEGVVPGPYLDVRDVWTFGIGHTAAAGPPDPARMPRGMPADTQAGISEAFRLFRTDLATYEAEVLRAVKVPLEPHEFDALVSFHYNTGGIAKAALTRHLNAGNRAAAAAAFMGWLKPAAIRSRREAERDLFAKGIYPTGTVPVWAVDRNGRVDFSRPIRRLTEAEALALLRPSGTPMPPPTHPATAPSWWQRLASLFTGKETT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: E3D03_19605, replication and recombination DNA helicase, phage(gi100033), PHAGE_Brucel_BiPBO1_NC_031264
Homolog/Ortholog E-Value: 2.52e-24
Locus 15: E3D03_19610 (Region 1)
Locus: E3D03_19610ORF Start: 31733
ORF Stop: 32023
Strand: Backward
Protein Sequence: MSEPTTVRMGALAAYLSLALALSAQGGAAIWWAGTQNTRMTSLEARVAELLSTSPLYHRQIVEADRRIAVIDERIANILARIEALTAALERRHDVP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19610, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 16: E3D03_19615 (Region 1)
Locus: E3D03_19615ORF Start: 32036
ORF Stop: 32662
Strand: Backward
Protein Sequence: MAFHEVRFPDNISRGARGGPERRTQIVELASGAEERNASWANSRRRYDVAYGIRRADDLAAVVAFFEARNGRLHGFRFKDWADFKSCLPSQTPGPTNQPIGTGNGSATLFQLTKRYTSGAQSWTRSITKPVAGTVTLALNGTPQASGWSVSTATGLVTFTTAPAAGVAITAGFEFDVPVRFDTDALDVTLDLERLGSITTIPLIELRL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: E3D03_19615, hypothetical protein, phage(gi100015), PHAGE_Rhodob_RcCronus_NC_042049
Homolog/Ortholog E-Value: 8.02e-71
Locus 17: E3D03_19620 (Region 1)
Locus: E3D03_19620ORF Start: 32662
ORF Stop: 33268
Strand: Backward
Protein Sequence: AAEGADTALIGWQAVTAALADYAAKARNIGGDIGSALVGAFQSAENAIGDFVKTGKLDFRDLVTSMIADLAKLAARRFILGPIANALSGALGGQAGFSQTSCMQAGWSAARAPAGWSRPWHSRARLGCTPAVGPDCAPMKCPRSCNAGSGFSPGAKQQATARRRAHRQRHDQRPRRREFPPVPDAGRQRHRPSRVPRAEGDVA
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: E3D03_19620, putative tail length tape measure protein, phage(gi431811013), PHAGE_Xantho_CP1_NC_019933
Homolog/Ortholog E-Value: 2.53e-11
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download