Submission Results
Sequence Name: Not Available
GenBank Accession Number: VLPR01000099.1 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: VLPR01000099.1.PHASTER.zip
gi|00000000|ref|VLPR01000099.1| Bacillus thuringiensis strain TB08 gnl_MG_TB08_99, whole genome 8083, gc%: 32.04%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 8Kb | incomplete | 20 | 8 | 8-8083 info_outline | PHAGE_Bacill_phIS3501_NC_019502(4) | 32.03% | Show info_outline |
Region DNA
>1 8-8083 AAAAAATGCACCTCCAATTGTTAGACTGTGTCTAACAATTGGGGTGCACTTCAAATCGTT AGAAAGGCCTTTTCTTTTTGCGTTAAAACAGAAAATGCATGTAAATTTACTTTAGATTTT AATTTAAATGTTATTATATATGGTATATATGATTAACGCTGTGAATTCGAGATTCATATT GTTCATTTTAAGATAAGATTATGTAGAAAAAATGTAAATAATTAGCAAAAATATACTATT TATTAGTTATATTTAATGTTAATATTTGTAACGAGGATGATTGGCGAGGGCTGATTAAAG TTTCACTTTATACAAAAAAGGGGCATGAGGGAGAAGGTTATAGCCAATTGTATAGAACTG AATACTTCCGTATTAATTAAAATACATTGATTACTAGATATTAAAAACCACCGGGGGAGA TTAGAGTGAAGTCATTTAAGAGAGTACTTATAGTAGGGATGGCGTTGACTACAGTATCGA TTTTGGGAGCTTGTTCTAGCGATACAGACGTATTAACAAAAGCAGGAGCAAAGCAACCAG CGAAGGCGGAAGGTGAAGTACTAAAAGATCAGAAGAAAACACCTATGACTACGAGCAAAC GTGAAAGTATTAAAAATGAGGATGCACCATCATCACAAAAGCGTTATATTTCTCATGATG AATCTCAAAAGATTGAGGAAGGTATGACGTATACGGATATTCTTAATACGATTGACTATG GTGGTGAGAACATAAAACATTATAATAACCATGAAAAACGCGTATTTTATACTGAAAAAG ATACGGATGGTACATATGAAATTATGGTTGAATTAAATACATATGGTTACGTTGTAAATA TTGAACGTACTGCTATAAAGGATAAAGATAAAGATAAAGAGAATCAGGTATTTACGAAAC GTAGTGAAGAGCCTGTAAAGGAATATGAAGAAAAAAACGATCGTGTACCGTGGTATAAAG ATGTAAATAACAATTCGGCAGCAGTAAGTTACAATCATTATTTGAAAATCAAAAAAGGTA TGCCCGCGAATCAGGTAAAAGCTGCAATTGGACAGCCACATGTGATTGAGAAATATAAAT CTTATTCAGTATATGACTATACTGGTTATGGTGGAGAAGGATCATTACGTGTAATCTTTG AACCGAATGGAACTGTTACGGATATAGTGGAAGACAGTTTACCACGATAATAAATTAGTT ACGGGAAGAATTGTAGTAAAGTTGTCTTTGATTTTATAAAGTTTTTGGGAGCATCTCCGA ATATAGGTGAAAAAATAATTCTCTTAGCCATGTTAACTACAGTATTAGTATTTACCGAAG TTTCTTCCAAATTCAATAGCGTTATCGTGGATGTTGTTGTCGTATTATCTTTGTTGATAT ATACCGCAGTAGGGCAGAAATTGTAACTGGACGCGGAGGAGTAGCAGCTTCCTTTTAAAA GAAGGAGGAAAATATGATGGAGGATATTCTTGAATTTATAGGGAGATACGTAATTAAACC TATTATTAGTTTAGTGAGATATCTTGTAATAGAGATTATAATTGAGGGCATAATAGAAGG CGTAATAAACGGTATAAGGAAATTACGTGATAAGTGGCGAAATTGGCGTGAAAGACGTTA TTGGCGGTAGTGTAGCTGATGAGCGTGAGAAACAAAAACGTTATACAGAAGCTTAATGGA ATGACAATTTCTAAAGTGAAGAAATAATTATTATCTTACAAAAGTGTAATGTTCATGTCA TGTTTTTGAATTTCTTCTTTAAGCTCCGGGCTTTAAGATAAGAATATAAGAAAAAACATA TGAGGTGAAGGAAATGAAAAGATACATTGCACTATTTAGTATTTTAGTTGTATTTGCAAG TTTGTTAGTTGGTTGTGATTTAAACCGTATGGGTAAAGATGAGTATTATGTTCAAATTAC AGTAGATGGAAAAGAATTTGATAGTAAAGCTAGTAATGGGCAGAAATTTAAAGATTATGA ATATAAGCTGACTGGCTTTGATAAAGACGGTAAAGAGAAAGAATTAGAATTCATAGCTCA AAAAAATCTTCGTAAAGAAGCATTCCTACGCGTATACCACTCAGATAAAAAAGGTGTAAC AGCTTGGGAAGAAGTGAAAAAAGACGAGCTTCCAGCGAAAGTGAAAGAAAAACTAAGTGT GAAATAAGACAGATAAAAAGGAATTGACGAACAGGGTCTTTTCTAAAGTTGTAATATCAA CGATTTATAGTTAATCGGTAACGGTTTGGTAACAATTATAGCAAATCTTTTTCCATAAAC GCAACTACTTCTGCTTGCTTCGAAGGATACAAATGGCTATAAGTATTTAAAGTTGTTGCT ACATCAGAATGCCCTAATCGCTGGGCTACAACCAGCGGGCTAACACCTTTATTTATTAGA TAAGAAGCATGAGAATGTCTAAACTCATGCATTACAATCTCTTTAACCATAGCAATCTTT AGATAGTTGTTGAATTTTTTATGTAATGAAGTTGTGGCGAGACTATCATAGAATTCACCA AAAACAACATAATCATTTTTAACTGGTGCTGTTAGTGCAGCATCTTTTTTTATACTTTTT AATAAATTCATTACAAAGTTAGGTAACATAATAATTCGATTAGAAGCTTTAGTTTTTGGT TCTGTAACTTGACGATTGTATTTAGTTTTGTGAATGTTAATGGTCTTTTCTTCGAAATTT ATATCTTCCCAAGTTAAAGCTAGTAGTTCGCCTTTTCTTGCTCCACTATAATAAAGAGTT GAAAAGAATGCTTTATACATGGGCTCATCTACCACACTGATAAACTGTTTAAATTCTTCG AATTCCCAAAAGTTAATTCTTTTCTTTGATTCTTTTTGAAAATTCCCAGCAATTCTTGCT GGATTGGTTGTTAAACCATGAAATTTTATCCCAAAATTAAATATTGCTGAGAGTGTAGTG TGGAATTTTTTTAAATATTCCGCAGAGTATTCATTGATCATTTTGTTTTGATAGTCCATT ACATGTCTAGGTGTGATACAGTCAATTTTCATTTTTCCAAATTCTTTCATTAAATGATTG TAGATGGCATTTTTTATGGTATTTATTGAAGATTGTTTCCTCCTCTGCGTATACCAATTG AAATAACTATCTGCAACGTGCTCAAATGTTAGATTGGAGTTTGATTCTTTTTCAACTAAC ATTTTAGCTTCTGCTTCACGTGCTTCTTTTTTTGTTTTAAACCCACGACGTTTTACTTGC TTGGTTGTCCCATCAAACTGACGGACTCTTACTACGAAGAAATATGTACCTCGTTTGTCA TCCTTATAGATCACCATAGGGGTTCCTCCTTTATATAAAGAGTGATAATTCAATTTATTG AATAGATTATAGCTTGTTTGTTACCAAAAGAAAAGATGTCCCAATGAGAACATCTTAATA ATGGATTTAAGTTTGAAGAAATAACCATTGGTAAACGGCTAATTTTATGTTATGCCATTT GTTAATAAAAGGAGTCAGTCCAATAAAAGAATCCGCTGCAATCTGCAACGGATTCTAGTC TTAGAAGTTTGAAGCAACTAAGACGTTTTGTGATGGAAATTCGATTATAACATATGACGT TTAAAAACCAAATGGACCTTATAGGATTTGAACCTATGACCGGACGGTTATGAGCCGTCT GCTCTGACCAACTGAGCTAAAGGTCCTTGTATGAATAGTATATCAGCGTGTACAAAAAAA GAAAAGGCACAATCAATATGAAAGTGTCTTTTCTTTCAGCTTAATATTCCTTTAAATAAA TAGAGGTGTACCTCTTTTATCAGGATGTAAACACAACCTATAAAACAGAATCATCTTTAA ATCCAGATTGTTAGCACACACAATAAAAAGAAGCGAGGTAAATATTTAGATAAACGCTAT GTCACTAGTGCGATTGACATATTACGCTCTTAATAATAAGAGAATCTGATTTATAGAATG TATCCACGTTTTTTATTGTACTACTTCTATTATGTACATGGTGTATTTTTTGGTGATTAT GCAAAATTGCATTATTGCAGTTTCTATAAAACACAAAAAAAGACATCCAAATAAGGATGT CTACGAAATTAAACCATCTTACTTTTAATAACAGAAGAGTAAGGGAACTCAATTATTATT AAACCATCATATTGATAAAAACAGAAAGGATACTTTTATATTATCATATAGTGCTATCTG TTAATATTGATAAAAAATAAAAGCTAATTTTTGGGAAAGAGATAAAATTTAATAATTGGC TGGGTGTGGATTTTTCGTAATGGCTGGTTTTGTATCACTAAAATTGAAATATACTAACAA AACAATGGAGGAATGGGAAACAATTGTCATTTTAGAGAAACAATTGTTGAAAAAATCAAA AAAGACAATTATTTTAAAGGGGATTGTGTTATATTGGGTGCGTATATCCAATTATGGAAG AGAATTTGCAGTTTCGAAAGTTTATGAAATTAACAAAATAATATTATTGAACATAAATAT AGACCCATAGAAGCGTGTGTACAAGTGTTGTGACCACAATTACACCGTTCCCTAACCGTA CCTTAGGAAACACTTGCCTCGTATGAGTCCATCTTATTATATCATACATTAGCAATGTTC CTTATTGAAAAATAAGTTAGGATGGAAAGTTTATGTTCGGAGAAGGGGGAAGTGAATTTG CAACATGTAATGGATCAGTTGTTGAAAAGAATAGAATTTTGCGGATATTCAAGAAGGAAT TTTGCTGAGAAAATCAAAGTAAGTCGTGAAACATTCAGGAGAGGACTTACTTGTGAATAT GAAATGGATGTAGCAGTATTTTTTCAATCCATTGAGATTTTATTTGAGCATCCAACTGAA AAAAGAAAAATCATAAGAGAATTTTTCAGTATGTGTGAAAGTATCTCTAACATTGAAGTG GCTTTAATATATTGTCAGGTTCAAGGTGAATATAATCTGATGCAACATTTAATAAAAAAG CATGAAAGTAAAAAGAATTTAGGAATTTTCTTTAGCATATATAAACTTTTTAATAAGAGG AATAAAAATGAGTTAAAAGGACAGGCACTGCACGATGAATTGAACAAGCGGCGTTTTTCT TCGAATCCACATTGCCAGGTGATGGTAAATATACTGTATATGCTAGCATTAGCTGATAAG CCGAATAATAACGCCATTATTGAATATGTAGACGCTGTAGAAGCAAATTTAAAAAAAATC AAAAAAGGTCATATTAAAGATTATCTTAGTATGCTAGCAAATGAAAGAAAAGCATACATG TATCTTTGGAGAGTGCAACTTGATGAATGTAGGGAAACATGTTATAAAATAATTAACTCT TCCCTAGATATTCCAATTGTCAAAGCGACATCATTATGTTGCGTTGGTGAATCTTACCAG TTCGAGTCGCCGATTATGTCTGAAAAGTTCCTAGAACAATCTATTAAAAAATTAGAAGAA GTTAATGTCCCTGTAAAAACTCAAAAGTATATAGCTTTTCAAACTACATTGGCGCATGTA AGGATAACTAACAATTTAAACATTGATAAGATTGATGTTACGGTAATTCATGAAAATGAA CAGGCTAATTATGAATATAACTATGGTGATAGAGAGTTAGGAGTTTCAATGTTTGAACAG ATGAAAAGAAAAGGATTTACTCCTTTTCAACGTCTTTCTTATTCAAAATGTATTGGTGAT ATGGAAGGAATTAAACAAGCTCTACTCGAATTTGAATTAGCAGGGTTAAGTTTTTATGGA CAGTTATGTAAGGATATTTTAATGAACAAAGGGGAAGTGCTACAATGAAAAAGAATTTAA TTGCACTTTTAATGTGCGTAGGGGTATTAGGATTCGGATTATTTGGAGAAGTTAATCAGC TAGAAAAAACAAATCCAGTTCAGTATATGATGACTGATCCCGGCGGAAGTTAATATAGTT ACTATAAAAAAGAAAGTCGCTACTTCGGTAGCGGCTTTCAGTGCGTTTAAGGAGTGACAC AAATAAAATCACACGTCGTAAAACTGTGTCGCCTGATTTTTGATTAAAATGAATAGGAGG AATTTTAATGTTAAACACTGTAGAGGTAGATGTTAAAGAAAAAATAAGTGAGTTAGTTGA ACTTGCATATAAAGGAGATCAAGAAGCAATTGAAAAAATAATCAAAATAAAAAAAGAACT TGGTGGAAGTTAATCTGCCAAGTTCTTTTTTTATAGATCATTGATCATATTTATAATTTT GCTTCGTTTATCAGCAGGAAGCTGATTAATACGTTTCATGATATCTTCAACATCATCTGT TATTTTTTTTGATGTTTCTTCATCAAAAGTTTTATGCTTTGAAAGCCCCATAATATAATC AGCGGAAACGTTTGTAACACGAGCTATATTTTCTACCGTTTCCCTACTAGGTTCACGTTT ATTTGATTCATATAGCGAAATCATTGTGTAGTTTACACCGACAGCATCTGCAAGTTCATT TTGTTTCATTTTTAAAGATTTACGAACCTCTTTTATACGACTACCCATAGTTTCAGACAT TATTAAACCTCCTTTTAACTTTACGTTTATTTCTCTCTTTGTTATATATAATGTACAATA AAACTTTGCTTAAAGACAAGTTTTTTTATTTTTTTTAGAAAATATACTTTGCAACAAGCA AATTTAATTGTACAATGTGTTTAACAAAAGAAAAATAAAGAGAAAAAGATAAACAAATAC TTTGCAACAAGCAAGTTTTTATTATCAAAACCTTTGCTTGTTGCAAAGGTTTAGGGAGGT ATATAGTGTGGATAATGAAAAAGACTTATCTGCTCGAGAAGCAAAAAAGGCTTACATGCG AGCCTGGAGAGCAGCTAATAAAGAAAAGGTTAAAGCAACTCAGGAACGATATTGGAAGAA AGTGGCGCAGAAAATGAATATGGAAGAAAGTGAAATTAAGAATGATTACAATCGCAATTG GTATCAGAAAAATAAAGATAAAAGAAATGATTACATGCGAGATTATTACCAAAAGAAAAA ACAAAATTCTTAAGGTAACTGAAAAAAGGTGATAACAAAATGATAGAGGAAAGCACGTTT TCATTAATGATAGTTGCAATCGTGATTTGTATAGTCTCTTTAGCAGTTTGTTTTTTGGAT GAGCCAATTGAAAAGTTTATAAAGGATGATGATAGAGATGTATAAAAACCTATTTATTGT TCGAAGAGAACATCGTATGACGCAAGAGGATGCTGGGAAGTTAGTAAACATATGCCAGCA AACGTATTACCTAAAGGAAAAGGGAAAACGTGATTTTACTCTTACAGAAGCAAAATTACT CGCACAACATTTTAAAACAACAGTAGACGACTTATTTGCGAAGTAACTGGAGGGGAATTT TAATGAAAAACGGTAAAAAATTGACAAAACGTGAAAAAATGCACCTTAAATCATACAAAT TGAATCCTGATAATTGGTTAATTTTTAAGAAGGTAGATGGCGAACTACATTTAGTGCATC GTCATACGAACTCAATACGAGTCATTCCAAGTGCATAGGATGGACAAGCACTATTAAAAA TGAGGAGGGTATTATATGGATTAATTAACAGTAGCAAACGAATTAAATATTTTAGGACAA CAATATATTGCTGGTTATCAGTTCACCGGAATTGAGGGTGGGTTCGGCAAAGGTAAGAAA GCTATGTTAGTTAAGGAAATTGCCATCATTCATGATAAGCCAATAAAAGAAATTAATCGT CGTATTAATGAAAATCGTATCCGTTTTATGGACGGAATTGATATTCTCGATTTAAAAAGT GGTGCTTTTAACCCACCACAATTATTAAGTCTTGGCTTTTCAAATATGCAAATCGCAAAA TCTAATAACATATACCTTCTATCAGAACGAGGATATGCAAAGTTATTAAAAATTCTCGAA GATGAGACTGCATGGGAATTATATGATCAATTTGTTGATGGTTATTTCAATATGAGAGCC AAGGAATATCAACAACAAGTGCCTACAGATCCAATGAGTATTTTAAAGCTTACTTTTGAA GCGCTAGAAGGGCAAAAGCAAGAACTCCAGCACATC
Region Details
| Region | 1 |
| Region Length | 8Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | integrase |
| Region Position | 8-8083 |
| # tRNA | 1 |
| # Total Proteins | 8 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | yes |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Bacill_phIS3501_NC_019502(4) PHAGE_Bacill_BtCS33_NC_018085(2) PHAGE_Bacill_BceA1_NC_048628(2) PHAGE_Bacill_phiCM3_NC_023599(2) PHAGE_Staphy_SpaA1_NC_018277(2) PHAGE_Clostr_phiCTC2B_NC_030951(1) PHAGE_Staphy_53_NC_007049(1) PHAGE_Staphy_StB20_like_NC_028821(1) PHAGE_Anoxyb_A403_NC_048701(1) PHAGE_Bacill_Gamma_NC_007458(1) PHAGE_Bacill_vB_BtS_B83_NC_048762(1) PHAGE_Bacill_phBC6A52_NC_004821(1) PHAGE_Paenib_Harrison_NC_028746(1) PHAGE_Bacill_WBeta_NC_007734(1) PHAGE_Bacill_phi4B1_NC_028886(1) PHAGE_Clostr_CDMH1_NC_024144(1) PHAGE_Bacill_250_NC_029024(1) PHAGE_Bacill_Fah_NC_007814(1) PHAGE_Bacill_BMBtpLA_NC_028748(1) PHAGE_Bacill_phi4J1_NC_029008(1) PHAGE_Bacill_IEBH_NC_011167(1) |
| First Most Common Phage # | 4 |
| First Most Common Phage % | 50% |
| GC % | 32.03% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|VLPR01000099.1| Bacillus thuringiensis strain TB08 gnl_MG_TB08_99, whole genome 8083, gc%: 32.04%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 11 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 8..20 | attL | 0.0 | Showinfo_outline |
| 2 | 1821..2174 | PHAGE_Paenib_Harrison_NC_028746: cytoplasmic protein; FPG95_29070; phage(gi971482389) | 8.65e-21 | Showinfo_outline |
| 3 | complement(2263..3324) | PHAGE_Bacill_phIS3501_NC_019502: phage integrase; FPG95_29075; phage(gi422934298) | 0.0 | Showinfo_outline |
| 4 | complement(3620..3693) | tRNA | 0.0 | Showinfo_outline |
| 5 | 4287..4517 | PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FPG95_29085; phage(gi422934300) | 1.19e-40 | Showinfo_outline |
| 6 | 4685..5815 | PHAGE_Bacill_phIS3501_NC_019502: helix-turn-helix protein; FPG95_29090; phage(gi422934301) | 7.68e-72 | Showinfo_outline |
| 7 | complement(6218..6547) | PHAGE_Bacill_phIS3501_NC_019502: transcriptional regulator XRE family protein; FPG95_29095; phage(gi422934302) | 1.81e-71 | Showinfo_outline |
| 8 | 6795..7040 | hypothetical protein; FPG95_29100 | 0.0 | Showinfo_outline |
| 9 | 7185..7373 | PHAGE_Bacill_BceA1_NC_048628: hypothetical protein; FPG95_29105; phage(gi100035) | 7.13e-24 | Showinfo_outline |
| 10 | 7421..7433 | attR | 0.0 | Showinfo_outline |
| 11 | 7691..8083 | PHAGE_Bacill_WBeta_NC_007734: putative antirepressor; FPG95_29110; phage(gi85701411) | 8.27e-68 | Showinfo_outline |
Sequence
>8..20
AAAAAATGCACCT
Sequence
>1821..2174
BacillusthuringiensisMKRYIALFSILVVFASLLVGCDLNRMGKDEYYVQITVDGKEFDSKASNGQKFKDYEYKLTGFDKDGKEKELEFIAQKNLRKEAFLRVYHSDKKGVTAWEEVKKDELPAKVKEKLSVK
Sequence
>complement(2263..3324)
BacillusthuringiensisMVIYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTKKEAREAEAKMLVEKESNSNLTFEHVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINEYSAEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDEPMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIMLPNFVMNLLKSIKKDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKIAMVKEIVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAFMEKDLL
Sequence
>complement(3620..3693)
GGACCTTTAGCTCAGTTGGTCAGAGCAGACGGCTCATAACCGTCCGGTCATAGGTTCAAATCCTATAAGGTCCA
Sequence
>4287..4517
BacillusthuringiensisMAGFVSLKLKYTNKTMEEWETIVILEKQLLKKSKKTIILKGIVLYWVRISNYGREFAVSKVYEINKIILLNINIDP
Sequence
>4685..5815
BacillusthuringiensisMQHVMDQLLKRIEFCGYSRRNFAEKIKVSRETFRRGLTCEYEMDVAVFFQSIEILFEHPTEKRKIIREFFSMCESISNIEVALIYCQVQGEYNLMQHLIKKHESKKNLGIFFSIYKLFNKRNKNELKGQALHDELNKRRFSSNPHCQVMVNILYMLALADKPNNNAIIEYVDAVEANLKKIKKGHIKDYLSMLANERKAYMYLWRVQLDECRETCYKIINSSLDIPIVKATSLCCVGESYQFESPIMSEKFLEQSIKKLEEVNVPVKTQKYIAFQTTLAHVRITNNLNIDKIDVTVIHENEQANYEYNYGDRELGVSMFEQMKRKGFTPFQRLSYSKCIGDMEGIKQALLEFELAGLSFYGQLCKDILMNKGEVLQ
Sequence
>complement(6218..6547)
BacillusthuringiensisMSETMGSRIKEVRKSLKMKQNELADAVGVNYTMISLYESNKREPSRETVENIARVTNVSADYIMGLSKHKTFDEETSKKITDDVEDIMKRINQLPADKRSKIINMINDL
Sequence
>6795..7040
BacillusthuringiensisMDNEKDLSAREAKKAYMRAWRAANKEKVKATQERYWKKVAQKMNMEESEIKNDYNRNWYQKNKDKRNDYMRDYYQKKKQNS
Sequence
>7185..7373
BacillusthuringiensisMYKNLFIVRREHRMTQEDAGKLVNICQQTYYLKEKGKRDFTLTEAKLLAQHFKTTVDDLFAK
Sequence
>7421..7433
AAAAAATGCACCT
Sequence
>7691..8083
BacillusthuringiensisMLVKEIAIIHDKPIKEINRRINENRIRFMDGIDILDLKSGAFNPPQLLSLGFSNMQIAKSNNIYLLSERGYAKLLKILEDETAWELYDQFVDGYFNMRAKEYQQQVPTDPMSILKLTFEALEGQKQELQHI
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 8083 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 8
ORF Stop: 20
Strand: Forward
Protein Sequence: AAAAAATGCACCT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: FPG95_29070 (Region 1)
Locus: FPG95_29070ORF Start: 1821
ORF Stop: 2174
Strand: Forward
Protein Sequence: MKRYIALFSILVVFASLLVGCDLNRMGKDEYYVQITVDGKEFDSKASNGQKFKDYEYKLTGFDKDGKEKELEFIAQKNLRKEAFLRVYHSDKKGVTAWEEVKKDELPAKVKEKLSVK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: FPG95_29070, cytoplasmic protein, phage(gi971482389), PHAGE_Paenib_Harrison_NC_028746
Homolog/Ortholog E-Value: 8.65e-21
Locus 3: FPG95_29075 (Region 1)
Locus: FPG95_29075ORF Start: 2263
ORF Stop: 3324
Strand: Backward
Protein Sequence: MVIYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTKKEAREAEAKMLVEKESNSNLTFEHVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINEYSAEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDEPMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIMLPNFVMNLLKSIKKDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKIAMVKEIVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAFMEKDLL
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: FPG95_29075, phage integrase, phage(gi422934298), PHAGE_Bacill_phIS3501_NC_019502
Homolog/Ortholog E-Value: 0.0
Locus 4: tRNA (Region 1)
Locus: tRNAORF Start: 3620
ORF Stop: 3693
Strand: Backward
Protein Sequence: GPLAQLVRADGSPSGHRFKSYKVCA
Homolog/Ortholog Species: Trna
Homolog/Ortholog Protein: tRNA
Homolog/Ortholog E-Value: N/A
Locus 5: FPG95_29085 (Region 1)
Locus: FPG95_29085ORF Start: 4287
ORF Stop: 4517
Strand: Forward
Protein Sequence: MAGFVSLKLKYTNKTMEEWETIVILEKQLLKKSKKTIILKGIVLYWVRISNYGREFAVSKVYEINKIILLNINIDP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: FPG95_29085, hypothetical protein, phage(gi422934300), PHAGE_Bacill_phIS3501_NC_019502
Homolog/Ortholog E-Value: 1.19e-40
Locus 6: FPG95_29090 (Region 1)
Locus: FPG95_29090ORF Start: 4685
ORF Stop: 5815
Strand: Forward
Protein Sequence: MQHVMDQLLKRIEFCGYSRRNFAEKIKVSRETFRRGLTCEYEMDVAVFFQSIEILFEHPTEKRKIIREFFSMCESISNIEVALIYCQVQGEYNLMQHLIKKHESKKNLGIFFSIYKLFNKRNKNELKGQALHDELNKRRFSSNPHCQVMVNILYMLALADKPNNNAIIEYVDAVEANLKKIKKGHIKDYLSMLANERKAYMYLWRVQLDECRETCYKIINSSLDIPIVKATSLCCVGESYQFESPIMSEKFLEQSIKKLEEVNVPVKTQKYIAFQTTLAHVRITNNLNIDKIDVTVIHENEQANYEYNYGDRELGVSMFEQMKRKGFTPFQRLSYSKCIGDMEGIKQALLEFELAGLSFYGQLCKDILMNKGEVLQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: FPG95_29090, helix-turn-helix protein, phage(gi422934301), PHAGE_Bacill_phIS3501_NC_019502
Homolog/Ortholog E-Value: 7.68e-72
Locus 7: FPG95_29095 (Region 1)
Locus: FPG95_29095ORF Start: 6218
ORF Stop: 6547
Strand: Backward
Protein Sequence: MSETMGSRIKEVRKSLKMKQNELADAVGVNYTMISLYESNKREPSRETVENIARVTNVSADYIMGLSKHKTFDEETSKKITDDVEDIMKRINQLPADKRSKIINMINDL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: FPG95_29095, transcriptional regulator XRE family protein, phage(gi422934302), PHAGE_Bacill_phIS3501_NC_019502
Homolog/Ortholog E-Value: 1.81e-71
Locus 8: FPG95_29100 (Region 1)
Locus: FPG95_29100ORF Start: 6795
ORF Stop: 7040
Strand: Forward
Protein Sequence: MDNEKDLSAREAKKAYMRAWRAANKEKVKATQERYWKKVAQKMNMEESEIKNDYNRNWYQKNKDKRNDYMRDYYQKKKQNS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: FPG95_29100, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: FPG95_29105 (Region 1)
Locus: FPG95_29105ORF Start: 7185
ORF Stop: 7373
Strand: Forward
Protein Sequence: MYKNLFIVRREHRMTQEDAGKLVNICQQTYYLKEKGKRDFTLTEAKLLAQHFKTTVDDLFAK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: FPG95_29105, hypothetical protein, phage(gi100035), PHAGE_Bacill_BceA1_NC_048628
Homolog/Ortholog E-Value: 7.13e-24
Locus 10: attR (Region 1)
Locus: attRORF Start: 7421
ORF Stop: 7433
Strand: Forward
Protein Sequence: AAAAAATGCACCT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 11: FPG95_29110 (Region 1)
Locus: FPG95_29110ORF Start: 7691
ORF Stop: 8083
Strand: Forward
Protein Sequence: MLVKEIAIIHDKPIKEINRRINENRIRFMDGIDILDLKSGAFNPPQLLSLGFSNMQIAKSNNIYLLSERGYAKLLKILEDETAWELYDQFVDGYFNMRAKEYQQQVPTDPMSILKLTFEALEGQKQELQHI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: FPG95_29110, putative antirepressor, phage(gi85701411), PHAGE_Bacill_WBeta_NC_007734
Homolog/Ortholog E-Value: 8.27e-68
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download